RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 ARID5BQ14865 1188 aa11.83□□□□□ -0.52
PDLIM1-205ENST00000493949 GDF6Q6KF10 455 aaPredicted RBP11.83□□□□□ -0.52
PDLIM1-205ENST00000493949 FAM117BQ6P1L5 589 aa11.83□□□□□ -0.52
PDLIM1-205ENST00000493949 TRAF7Q6Q0C0 670 aa11.83□□□□□ -0.52
PDLIM1-205ENST00000493949 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.83□□□□□ -0.52
PDLIM1-205ENST00000493949 FBXO11Q86XK2 927 aa11.83□□□□□ -0.52
PDLIM1-205ENST00000493949 REXO1L1PQ8IX06 675 aa11.83□□□□□ -0.52
PDLIM1-205ENST00000493949 TMEM192Q8IY95 271 aa11.83□□□□□ -0.52
PDLIM1-205ENST00000493949 CEP112Q8N8E3 955 aa11.83□□□□□ -0.52
PDLIM1-205ENST00000493949 GMCL1P1Q8NEA9 526 aa11.83□□□□□ -0.52
PDLIM1-205ENST00000493949 ENOX1Q8TC92 643 aaKnown RBP11.83□□□□□ -0.52
PDLIM1-205ENST00000493949 MSLNLQ96KJ4 702 aa11.83□□□□□ -0.52
PDLIM1-205ENST00000493949 PUS7LQ9H0K6 701 aaKnown RBP11.83□□□□□ -0.52
PDLIM1-205ENST00000493949 LMAN2LQ9H0V9 348 aa11.83□□□□□ -0.52
PDLIM1-205ENST00000493949 ACBD3Q9H3P7 528 aa11.83□□□□□ -0.52
PDLIM1-205ENST00000493949 MYO1AQ9UBC5 1043 aa11.83□□□□□ -0.52
PDLIM1-205ENST00000493949 CD207Q9UJ71 328 aa11.83□□□□□ -0.52
PDLIM1-205ENST00000493949 CEP131Q9UPN4 1083 aa11.83□□□□□ -0.52
PDLIM1-205ENST00000493949 MRFAP1Q9Y605 127 aa11.83□□□□□ -0.52
PDLIM1-205ENST00000493949 SLC4A4Q9Y6R1 1079 aa11.83□□□□□ -0.52
PDLIM1-205ENST00000493949 CEP250Q9BV73 2442 aa11.82□□□□□ -0.52
PDLIM1-205ENST00000493949 KIAA1217Q5T5P2 1943 aa11.82□□□□□ -0.52
PDLIM1-205ENST00000493949 MYO10Q9HD67 2058 aa11.82□□□□□ -0.52
PDLIM1-205ENST00000493949 C5orf67F2Z3F1 127 aa11.82□□□□□ -0.52
PDLIM1-205ENST00000493949 PRC1O43663 620 aa11.82□□□□□ -0.52
PDLIM1-205ENST00000493949 KRT37O76014 449 aa11.82□□□□□ -0.52
PDLIM1-205ENST00000493949 AMHP03971 560 aa11.82□□□□□ -0.52
PDLIM1-205ENST00000493949 MCM3P25205 808 aa11.82□□□□□ -0.52
PDLIM1-205ENST00000493949 ERCC5P28715 1186 aaPredicted RBP11.82□□□□□ -0.52
PDLIM1-205ENST00000493949 CASQ1P31415 396 aa11.82□□□□□ -0.52
PDLIM1-205ENST00000493949 SEMA3FQ13275 785 aa11.82□□□□□ -0.52
PDLIM1-205ENST00000493949 CLUL1Q15846 466 aa11.82□□□□□ -0.52
PDLIM1-205ENST00000493949 SPECC1LQ69YQ0 1117 aa11.82□□□□□ -0.52
PDLIM1-205ENST00000493949 RSRC2Q7L4I2 434 aaKnown RBP11.82□□□□□ -0.52
PDLIM1-205ENST00000493949 RASGRP2Q7LDG7 609 aa11.82□□□□□ -0.52
PDLIM1-205ENST00000493949 LRRC47Q8N1G4 583 aaKnown RBP11.82□□□□□ -0.52
PDLIM1-205ENST00000493949 PYM1Q9BRP8 204 aaKnown RBP11.82□□□□□ -0.52
PDLIM1-205ENST00000493949 ADD3Q9UEY8 706 aaKnown RBP11.82□□□□□ -0.52
PDLIM1-205ENST00000493949 PPP2R2CQ9Y2T4 447 aa11.82□□□□□ -0.52
PDLIM1-205ENST00000493949 CFAP47Q6ZTR5 3102 aa11.81□□□□□ -0.52
PDLIM1-205ENST00000493949 KLF18A0A0U1RQI7 1052 aa11.81□□□□□ -0.52
PDLIM1-205ENST00000493949 PLA2G6O60733 806 aa11.81□□□□□ -0.52
PDLIM1-205ENST00000493949 LGR5O75473 907 aa11.81□□□□□ -0.52
PDLIM1-205ENST00000493949 PRDM1O75626 825 aa11.81□□□□□ -0.52
PDLIM1-205ENST00000493949 BMP15O95972 392 aa11.81□□□□□ -0.52
PDLIM1-205ENST00000493949 RB1P06400 928 aa11.81□□□□□ -0.52
PDLIM1-205ENST00000493949 IVLP07476 585 aa11.81□□□□□ -0.52
PDLIM1-205ENST00000493949 BMP3P12645 472 aa11.81□□□□□ -0.52
PDLIM1-205ENST00000493949 PLA2G4AP47712 749 aa11.81□□□□□ -0.52
PDLIM1-205ENST00000493949 ALDH5A1P51649 535 aaPredicted RBP11.81□□□□□ -0.52
PDLIM1-205ENST00000493949 STAT2P52630 851 aa11.81□□□□□ -0.52
PDLIM1-205ENST00000493949 CCT2P78371 535 aaKnown RBP11.81□□□□□ -0.52
PDLIM1-205ENST00000493949 ADAM15Q13444 863 aa11.81□□□□□ -0.52
PDLIM1-205ENST00000493949 COL9A3Q14050 684 aaPredicted RBP11.81□□□□□ -0.52
PDLIM1-205ENST00000493949 MBTPS1Q14703 1052 aa11.81□□□□□ -0.52
PDLIM1-205ENST00000493949 NAA30Q147X3 362 aaPredicted RBP11.81□□□□□ -0.52
PDLIM1-205ENST00000493949 PPP2R5BQ15173 497 aa11.81□□□□□ -0.52
PDLIM1-205ENST00000493949 ALX1Q15699 326 aa11.81□□□□□ -0.52
PDLIM1-205ENST00000493949 TRIM71Q2Q1W2 868 aaKnown RBP11.81□□□□□ -0.52
PDLIM1-205ENST00000493949 CC2D1AQ6P1N0 951 aaPredicted RBP11.81□□□□□ -0.52
PDLIM1-205ENST00000493949 KRBA2Q6ZNG9 492 aa11.81□□□□□ -0.52
PDLIM1-205ENST00000493949 FAM160B2Q86V87 743 aa11.81□□□□□ -0.52
PDLIM1-205ENST00000493949 SGMS1Q86VZ5 419 aa11.81□□□□□ -0.52
PDLIM1-205ENST00000493949 TOP1MTQ969P6 601 aa11.81□□□□□ -0.52
PDLIM1-205ENST00000493949 BAG1Q99933 345 aaPredicted RBP11.81□□□□□ -0.52
PDLIM1-205ENST00000493949 CLIC4Q9Y696 253 aa11.81□□□□□ -0.52
PDLIM1-205ENST00000493949 ITIH6Q6UXX5 1313 aa11.81□□□□□ -0.52
PDLIM1-205ENST00000493949 CHD8Q9HCK8 2581 aa11.8□□□□□ -0.52
PDLIM1-205ENST00000493949 MYH7BA7E2Y1 1941 aa11.8□□□□□ -0.52
PDLIM1-205ENST00000493949 MED19A0JLT2 244 aaPredicted RBP11.8□□□□□ -0.52
PDLIM1-205ENST00000493949 ZNF213O14771 459 aa11.8□□□□□ -0.52
PDLIM1-205ENST00000493949 RPS6KA5O75582 802 aa11.8□□□□□ -0.52
PDLIM1-205ENST00000493949 URI1O94763 535 aaPredicted RBP11.8□□□□□ -0.52
PDLIM1-205ENST00000493949 CCDC175P0C221 793 aa11.8□□□□□ -0.52
PDLIM1-205ENST00000493949 ALAS1P13196 640 aa11.8□□□□□ -0.52
PDLIM1-205ENST00000493949 FECHP22830 423 aa11.8□□□□□ -0.52
PDLIM1-205ENST00000493949 TXLNAP40222 546 aa11.8□□□□□ -0.52
PDLIM1-205ENST00000493949 LIFRP42702 1097 aa11.8□□□□□ -0.52
PDLIM1-205ENST00000493949 PPP2R3AQ06190 1150 aa11.8□□□□□ -0.52
PDLIM1-205ENST00000493949 TRIM14Q14142 442 aa11.8□□□□□ -0.52
PDLIM1-205ENST00000493949 PTPAQ15257 358 aa11.8□□□□□ -0.52
PDLIM1-205ENST00000493949 TMEM139Q8IV31 216 aa11.8□□□□□ -0.52
PDLIM1-205ENST00000493949 MYOCDQ8IZQ8 938 aa11.8□□□□□ -0.52
PDLIM1-205ENST00000493949 GOLGA5Q8TBA6 731 aa11.8□□□□□ -0.52
PDLIM1-205ENST00000493949 CHURC1Q8WUH1 139 aa11.8□□□□□ -0.52
PDLIM1-205ENST00000493949 SEC62Q99442 399 aaKnown RBP11.8□□□□□ -0.52
PDLIM1-205ENST00000493949 HSD3B7Q9H2F3 369 aa11.8□□□□□ -0.52
PDLIM1-205ENST00000493949 CNNM2Q9H8M5 875 aa11.8□□□□□ -0.52
PDLIM1-205ENST00000493949 GTF2IRD1Q9UHL9 959 aa11.8□□□□□ -0.52
PDLIM1-205ENST00000493949 EMSYQ7Z589 1322 aa11.8□□□□□ -0.52
PDLIM1-205ENST00000493949 VWA3AA6NCI4 1184 aa11.79□□□□□ -0.52
PDLIM1-205ENST00000493949 MINDY4BA8MYZ0 360 aa11.79□□□□□ -0.52
PDLIM1-205ENST00000493949 TMEM232C9JQI7 657 aa11.79□□□□□ -0.52
PDLIM1-205ENST00000493949 LINC00271P0C7V0 271 aa11.79□□□□□ -0.52
PDLIM1-205ENST00000493949 ZNF18P17022 549 aa11.79□□□□□ -0.52
PDLIM1-205ENST00000493949 ICAM3P32942 547 aa11.79□□□□□ -0.52
PDLIM1-205ENST00000493949 EMP3P54852 163 aa11.79□□□□□ -0.52
PDLIM1-205ENST00000493949 PTK7Q13308 1070 aa11.79□□□□□ -0.52
PDLIM1-205ENST00000493949 SAFBQ15424 915 aaKnown RBP eCLIP11.79□□□□□ -0.52
PDLIM1-205ENST00000493949 SBK1Q52WX2 424 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms