RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 KRT26Q7Z3Y9 468 aa7.65□□□□□ -1.18
TRA2B-216ENST00000493864 LDHDQ86WU2 507 aa7.65□□□□□ -1.18
TRA2B-216ENST00000493864 FBXL16Q8N461 479 aa7.65□□□□□ -1.18
TRA2B-216ENST00000493864 KCT2Q8NC54 265 aa7.65□□□□□ -1.18
TRA2B-216ENST00000493864 WDR19Q8NEZ3 1342 aa7.65□□□□□ -1.18
TRA2B-216ENST00000493864 BRF1Q92994 677 aa7.65□□□□□ -1.18
TRA2B-216ENST00000493864 TMEM87BQ96K49 555 aa7.65□□□□□ -1.18
TRA2B-216ENST00000493864 CCDC17Q96LX7 622 aa7.65□□□□□ -1.18
TRA2B-216ENST00000493864 AGXT2Q9BYV1 514 aa7.65□□□□□ -1.18
TRA2B-216ENST00000493864 GLIS2Q9BZE0 524 aaPredicted RBP7.65□□□□□ -1.18
TRA2B-216ENST00000493864 LY9Q9HBG7 655 aa7.65□□□□□ -1.18
TRA2B-216ENST00000493864 GINM1Q9NU53 330 aa7.65□□□□□ -1.18
TRA2B-216ENST00000493864 HERC5Q9UII4 1024 aaKnown RBP7.65□□□□□ -1.18
TRA2B-216ENST00000493864 TPCN1Q9ULQ1 816 aa7.65□□□□□ -1.18
TRA2B-216ENST00000493864 FZD1Q9UP38 647 aa7.65□□□□□ -1.18
TRA2B-216ENST00000493864 LIMCH1Q9UPQ0 1083 aa7.65□□□□□ -1.18
TRA2B-216ENST00000493864 EFR3BQ9Y2G0 817 aa7.65□□□□□ -1.18
TRA2B-216ENST00000493864 LAMB1P07942 1786 aa7.64□□□□□ -1.19
TRA2B-216ENST00000493864 IGKV6D-41A0A0C4DH26 115 aa7.64□□□□□ -1.19
TRA2B-216ENST00000493864 DTNBO60941 627 aa7.64□□□□□ -1.19
TRA2B-216ENST00000493864 USP2O75604 605 aaPredicted RBP7.64□□□□□ -1.19
TRA2B-216ENST00000493864 HTR3BO95264 441 aa7.64□□□□□ -1.19
TRA2B-216ENST00000493864 LARGE1O95461 756 aa7.64□□□□□ -1.19
TRA2B-216ENST00000493864 FURINP09958 794 aa7.64□□□□□ -1.19
TRA2B-216ENST00000493864 H2AFB1P0C5Y9 115 aa7.64□□□□□ -1.19
TRA2B-216ENST00000493864 H2AFB2P0C5Z0 115 aa7.64□□□□□ -1.19
TRA2B-216ENST00000493864 CLCQ05315 142 aa7.64□□□□□ -1.19
TRA2B-216ENST00000493864 PRKG1Q13976 671 aa7.64□□□□□ -1.19
TRA2B-216ENST00000493864 BECN1Q14457 450 aa7.64□□□□□ -1.19
TRA2B-216ENST00000493864 WTAPQ15007 396 aa7.64□□□□□ -1.19
TRA2B-216ENST00000493864 SEPT2Q15019 361 aa7.64□□□□□ -1.19
TRA2B-216ENST00000493864 ANKRD1Q15327 319 aa7.64□□□□□ -1.19
TRA2B-216ENST00000493864 ME3Q16798 604 aa7.64□□□□□ -1.19
TRA2B-216ENST00000493864 RSPO4Q2I0M5 234 aaPredicted RBP7.64□□□□□ -1.19
TRA2B-216ENST00000493864 ABCB5Q2M3G0 1257 aa7.64□□□□□ -1.19
TRA2B-216ENST00000493864 SUPT20HL1Q3ZLR7 823 aa7.64□□□□□ -1.19
TRA2B-216ENST00000493864 NKAPLQ5M9Q1 402 aa7.64□□□□□ -1.19
TRA2B-216ENST00000493864 IQCA1Q86XH1 822 aa7.64□□□□□ -1.19
TRA2B-216ENST00000493864 RAB11FIP4Q86YS3 637 aa7.64□□□□□ -1.19
TRA2B-216ENST00000493864 HID1Q8IV36 788 aa7.64□□□□□ -1.19
TRA2B-216ENST00000493864 HSCBQ8IWL3 235 aa7.64□□□□□ -1.19
TRA2B-216ENST00000493864 ENAHQ8N8S7 591 aaPredicted RBP7.64□□□□□ -1.19
TRA2B-216ENST00000493864 NECAB1Q8N987 351 aa7.64□□□□□ -1.19
TRA2B-216ENST00000493864 RASGRP4Q8TDF6 673 aa7.64□□□□□ -1.19
TRA2B-216ENST00000493864 ANKS1AQ92625 1134 aa7.64□□□□□ -1.19
TRA2B-216ENST00000493864 TMX3Q96JJ7 454 aa7.64□□□□□ -1.19
TRA2B-216ENST00000493864 SPATA32Q96LK8 384 aa7.64□□□□□ -1.19
TRA2B-216ENST00000493864 TINF2Q9BSI4 451 aa7.64□□□□□ -1.19
TRA2B-216ENST00000493864 UBAC1Q9BSL1 405 aa7.64□□□□□ -1.19
TRA2B-216ENST00000493864 TCP11L1Q9NUJ3 509 aa7.64□□□□□ -1.19
TRA2B-216ENST00000493864 REV1Q9UBZ9 1251 aa7.64□□□□□ -1.19
TRA2B-216ENST00000493864 NAP1L2Q9ULW6 460 aaPredicted RBP7.64□□□□□ -1.19
TRA2B-216ENST00000493864 ANGEL1Q9UNK9 670 aaKnown RBP7.64□□□□□ -1.19
TRA2B-216ENST00000493864 PPP2R3BQ9Y5P8 575 aa7.64□□□□□ -1.19
TRA2B-216ENST00000493864 TNKSO95271 1327 aa7.63□□□□□ -1.19
TRA2B-216ENST00000493864 PASKQ96RG2 1323 aa7.63□□□□□ -1.19
TRA2B-216ENST00000493864 KLF18A0A0U1RQI7 1052 aa7.63□□□□□ -1.19
TRA2B-216ENST00000493864 ERICH2A1L162 156 aa7.63□□□□□ -1.19
TRA2B-216ENST00000493864 K7ELQ4 463 aaPredicted RBP7.63□□□□□ -1.19
TRA2B-216ENST00000493864 TRAF5O00463 557 aa7.63□□□□□ -1.19
TRA2B-216ENST00000493864 GH2P01242 217 aa7.63□□□□□ -1.19
TRA2B-216ENST00000493864 PDIA3P30101 505 aaKnown RBP7.63□□□□□ -1.19
TRA2B-216ENST00000493864 GUCY1A2P33402 732 aa7.63□□□□□ -1.19
TRA2B-216ENST00000493864 CAP2P40123 477 aa7.63□□□□□ -1.19
TRA2B-216ENST00000493864 LIFRP42702 1097 aa7.63□□□□□ -1.19
TRA2B-216ENST00000493864 MCM2P49736 904 aa7.63□□□□□ -1.19
TRA2B-216ENST00000493864 NT5C2P49902 561 aa7.63□□□□□ -1.19
TRA2B-216ENST00000493864 EVCP57679 992 aa7.63□□□□□ -1.19
TRA2B-216ENST00000493864 STK3Q13188 491 aa7.63□□□□□ -1.19
TRA2B-216ENST00000493864 CDK5R2Q13319 367 aa7.63□□□□□ -1.19
TRA2B-216ENST00000493864 SART3Q15020 963 aaKnown RBP7.63□□□□□ -1.19
TRA2B-216ENST00000493864 NKG7Q16617 165 aa7.63□□□□□ -1.19
TRA2B-216ENST00000493864 NAALADL2Q58DX5 795 aa7.63□□□□□ -1.19
TRA2B-216ENST00000493864 CCDC178Q5BJE1 867 aa7.63□□□□□ -1.19
TRA2B-216ENST00000493864 DCAF15Q66K64 600 aa7.63□□□□□ -1.19
TRA2B-216ENST00000493864 NFXL1Q6ZNB6 911 aa7.63□□□□□ -1.19
TRA2B-216ENST00000493864 SIAH1Q8IUQ4 282 aa7.63□□□□□ -1.19
TRA2B-216ENST00000493864 REXO1Q8N1G1 1221 aaKnown RBP7.63□□□□□ -1.19
TRA2B-216ENST00000493864 TMTC2Q8N394 836 aa7.63□□□□□ -1.19
TRA2B-216ENST00000493864 DNAJC5GQ8N7S2 189 aa7.63□□□□□ -1.19
TRA2B-216ENST00000493864 HOOK2Q96ED9 719 aa7.63□□□□□ -1.19
TRA2B-216ENST00000493864 CDCA5Q96FF9 252 aa7.63□□□□□ -1.19
TRA2B-216ENST00000493864 ZNF274Q96GC6 653 aaPredicted RBP7.63□□□□□ -1.19
TRA2B-216ENST00000493864 CEP95Q96GE4 821 aa7.63□□□□□ -1.19
TRA2B-216ENST00000493864 ZSCAN31Q96LW9 406 aaPredicted RBP7.63□□□□□ -1.19
TRA2B-216ENST00000493864 IPO9Q96P70 1041 aaKnown RBP7.63□□□□□ -1.19
TRA2B-216ENST00000493864 MTA3Q9BTC8 594 aa7.63□□□□□ -1.19
TRA2B-216ENST00000493864 ZNF341Q9BYN7 854 aa7.63□□□□□ -1.19
TRA2B-216ENST00000493864 MTMR4Q9NYA4 1195 aa7.63□□□□□ -1.19
TRA2B-216ENST00000493864 CLIP2Q9UDT6 1046 aa7.63□□□□□ -1.19
TRA2B-216ENST00000493864 TJP2Q9UDY2 1190 aa7.63□□□□□ -1.19
TRA2B-216ENST00000493864 ZNF112Q9UJU3 913 aa7.63□□□□□ -1.19
TRA2B-216ENST00000493864 CCDC69A6NI79 296 aa7.62□□□□□ -1.19
TRA2B-216ENST00000493864 PFKFB2O60825 505 aa7.62□□□□□ -1.19
TRA2B-216ENST00000493864 RXRAP19793 462 aa7.62□□□□□ -1.19
TRA2B-216ENST00000493864 NOVP48745 357 aa7.62□□□□□ -1.19
TRA2B-216ENST00000493864 CCT2P78371 535 aaKnown RBP7.62□□□□□ -1.19
TRA2B-216ENST00000493864 SLBPQ14493 270 aaKnown RBP eCLIP7.62□□□□□ -1.19
TRA2B-216ENST00000493864 RAB3GAP1Q15042 981 aa7.62□□□□□ -1.19
TRA2B-216ENST00000493864 IFIT1BQ5T764 474 aaKnown RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms