RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 BHMT2Q9H2M3 363 aa21.52■■□□□ 1.04
RNF40-203ENST00000493683 SLC13A4Q9UKG4 626 aa21.52■■□□□ 1.04
RNF40-203ENST00000493683 WDR91A4D1P6 747 aa21.52■■□□□ 1.04
RNF40-203ENST00000493683 GMNCA6NCL1 334 aa21.52■■□□□ 1.04
RNF40-203ENST00000493683 CDK8P49336 464 aa21.52■■□□□ 1.04
RNF40-203ENST00000493683 TOGARAM2Q6ZUX3 1019 aa21.52■■□□□ 1.04
RNF40-203ENST00000493683 RYBPQ8N488 228 aaPredicted RBP21.52■■□□□ 1.04
RNF40-203ENST00000493683 STRBPQ96SI9 672 aaKnown RBP21.52■■□□□ 1.04
RNF40-203ENST00000493683 EDEM3Q9BZQ6 932 aa21.52■■□□□ 1.04
RNF40-203ENST00000493683 BSDC1Q9NW68 430 aaPredicted RBP21.52■■□□□ 1.04
RNF40-203ENST00000493683 ZFYVE16Q7Z3T8 1539 aa21.52■■□□□ 1.04
RNF40-203ENST00000493683 CD58P19256 250 aa21.52■■□□□ 1.04
RNF40-203ENST00000493683 CDC25AP30304 524 aa21.52■■□□□ 1.04
RNF40-203ENST00000493683 SOX5P35711 763 aa21.52■■□□□ 1.04
RNF40-203ENST00000493683 PDXDC2PQ6P474 469 aa21.52■■□□□ 1.04
RNF40-203ENST00000493683 GIMAP8Q8ND71 665 aaPredicted RBP21.52■■□□□ 1.04
RNF40-203ENST00000493683 SEL1LQ9UBV2 794 aa21.52■■□□□ 1.04
RNF40-203ENST00000493683 ZFP69BQ9UJL9 534 aa21.52■■□□□ 1.04
RNF40-203ENST00000493683 OCA2Q04671 838 aa21.52■■□□□ 1.04
RNF40-203ENST00000493683 DDX17Q92841 729 aaKnown RBP21.52■■□□□ 1.04
RNF40-203ENST00000493683 FAM20AQ96MK3 541 aa21.52■■□□□ 1.04
RNF40-203ENST00000493683 ALDH8A1Q9H2A2 487 aaPredicted RBP21.52■■□□□ 1.04
RNF40-203ENST00000493683 PFASO15067 1338 aa21.52■■□□□ 1.03
RNF40-203ENST00000493683 TARSL2A2RTX5 802 aaKnown RBP21.51■■□□□ 1.03
RNF40-203ENST00000493683 TMEM247A6NEH6 219 aa21.51■■□□□ 1.03
RNF40-203ENST00000493683 PMS2P54278 862 aa21.51■■□□□ 1.03
RNF40-203ENST00000493683 EPHB1P54762 984 aa21.51■■□□□ 1.03
RNF40-203ENST00000493683 ANAPC7Q9UJX3 599 aa21.51■■□□□ 1.03
RNF40-203ENST00000493683 KDM5CP41229 1560 aa21.51■■□□□ 1.03
RNF40-203ENST00000493683 USP6P35125 1406 aa21.51■■□□□ 1.03
RNF40-203ENST00000493683 PDCLQ13371 301 aa21.51■■□□□ 1.03
RNF40-203ENST00000493683 SLC12A1Q13621 1099 aa21.51■■□□□ 1.03
RNF40-203ENST00000493683 ARHGAP18Q8N392 663 aa21.51■■□□□ 1.03
RNF40-203ENST00000493683 XXYLT1Q8NBI6 393 aa21.51■■□□□ 1.03
RNF40-203ENST00000493683 YWHAHQ04917 246 aaPredicted RBP21.51■■□□□ 1.03
RNF40-203ENST00000493683 ANLNQ9NQW6 1124 aa21.51■■□□□ 1.03
RNF40-203ENST00000493683 FIS1Q9Y3D6 152 aa21.51■■□□□ 1.03
RNF40-203ENST00000493683 A0A0G2JND7 137 aa21.51■■□□□ 1.03
RNF40-203ENST00000493683 SASH1O94885 1247 aa21.51■■□□□ 1.03
RNF40-203ENST00000493683 TBXAS1P24557 533 aaPredicted RBP21.51■■□□□ 1.03
RNF40-203ENST00000493683 SPDYE1Q8NFV5 336 aaPredicted RBP21.51■■□□□ 1.03
RNF40-203ENST00000493683 RAD54LQ92698 747 aa21.51■■□□□ 1.03
RNF40-203ENST00000493683 LRFN2Q9ULH4 789 aa21.51■■□□□ 1.03
RNF40-203ENST00000493683 SNX24Q9Y343 169 aa21.51■■□□□ 1.03
RNF40-203ENST00000493683 HAUS5O94927 633 aa21.51■■□□□ 1.03
RNF40-203ENST00000493683 NR3C1P04150 777 aa21.51■■□□□ 1.03
RNF40-203ENST00000493683 MECOMQ03112 1051 aa21.51■■□□□ 1.03
RNF40-203ENST00000493683 UBE2SQ16763 222 aa21.51■■□□□ 1.03
RNF40-203ENST00000493683 PTPN21Q16825 1174 aa21.51■■□□□ 1.03
RNF40-203ENST00000493683 HP1BP3Q5SSJ5 553 aaPredicted RBP21.51■■□□□ 1.03
RNF40-203ENST00000493683 PIH1D3Q9NQM4 214 aaKnown RBP21.51■■□□□ 1.03
RNF40-203ENST00000493683 DYNC1I2Q13409 638 aaKnown RBP21.5■■□□□ 1.03
RNF40-203ENST00000493683 RC3H1Q5TC82 1133 aaKnown RBP21.5■■□□□ 1.03
RNF40-203ENST00000493683 ZBTB33Q86T24 672 aa21.5■■□□□ 1.03
RNF40-203ENST00000493683 A0A1W2PQC6 194 aa21.5■■□□□ 1.03
RNF40-203ENST00000493683 USP17L8P0C7I0 530 aa21.5■■□□□ 1.03
RNF40-203ENST00000493683 TTC17Q96AE7 1141 aa21.5■■□□□ 1.03
RNF40-203ENST00000493683 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.5■■□□□ 1.033e-7■■■□□ 15.8
RNF40-203ENST00000493683 H7C1W4 665 aa21.5■■□□□ 1.03
RNF40-203ENST00000493683 GDF11O95390 407 aa21.5■■□□□ 1.03
RNF40-203ENST00000493683 CHGBP05060 677 aa21.5■■□□□ 1.03
RNF40-203ENST00000493683 FAM196AQ6ZSG2 479 aa21.5■■□□□ 1.03
RNF40-203ENST00000493683 MAGEB5Q9BZ81 275 aa21.5■■□□□ 1.03
RNF40-203ENST00000493683 COA1Q9GZY4 146 aa21.5■■□□□ 1.03
RNF40-203ENST00000493683 ATP6V0A4Q9HBG4 840 aa21.5■■□□□ 1.03
RNF40-203ENST00000493683 A0A087WWV3 80 aa21.5■■□□□ 1.03
RNF40-203ENST00000493683 SERPINB2P05120 415 aa21.5■■□□□ 1.03
RNF40-203ENST00000493683 RASGRF1Q13972 1273 aa21.5■■□□□ 1.03
RNF40-203ENST00000493683 FMR1NBQ8N0W7 255 aaPredicted RBP21.5■■□□□ 1.03
RNF40-203ENST00000493683 SEC31BQ9NQW1 1179 aa21.5■■□□□ 1.03
RNF40-203ENST00000493683 GDAQ9Y2T3 454 aa21.5■■□□□ 1.03
RNF40-203ENST00000493683 ERFEQ4G0M1 354 aa21.49■■□□□ 1.03
RNF40-203ENST00000493683 ENOSF1Q7L5Y1 443 aa21.49■■□□□ 1.03
RNF40-203ENST00000493683 SMARCA1P28370 1054 aa21.49■■□□□ 1.03
RNF40-203ENST00000493683 ABTB1Q969K4 478 aaPredicted RBP21.49■■□□□ 1.03
RNF40-203ENST00000493683 TBC1D22BQ9NU19 505 aa21.49■■□□□ 1.03
RNF40-203ENST00000493683 ADGRL3Q9HAR2 1447 aa21.49■■□□□ 1.03
RNF40-203ENST00000493683 LRRC53A6NM62 1247 aa21.49■■□□□ 1.03
RNF40-203ENST00000493683 PRELPP51888 382 aa21.49■■□□□ 1.03
RNF40-203ENST00000493683 TOB2Q14106 344 aaPredicted RBP21.49■■□□□ 1.03
RNF40-203ENST00000493683 KIF19Q2TAC6 998 aa21.49■■□□□ 1.03
RNF40-203ENST00000493683 WNT8AQ9H1J5 351 aa21.49■■□□□ 1.03
RNF40-203ENST00000493683 ZWILCHQ9H900 591 aa21.49■■□□□ 1.03
RNF40-203ENST00000493683 DDX56Q9NY93 547 aaKnown RBP21.49■■□□□ 1.03
RNF40-203ENST00000493683 SCHIP1Q9P0W5 487 aaPredicted RBP21.49■■□□□ 1.03
RNF40-203ENST00000493683 ASAP1Q9ULH1 1129 aa21.49■■□□□ 1.03
RNF40-203ENST00000493683 HNRNPCL1O60812 293 aaKnown RBP21.49■■□□□ 1.03
RNF40-203ENST00000493683 GGCXP38435 758 aa21.49■■□□□ 1.03
RNF40-203ENST00000493683 TRIM72Q6ZMU5 477 aa21.49■■□□□ 1.03
RNF40-203ENST00000493683 SIRT2Q8IXJ6 389 aa21.49■■□□□ 1.03
RNF40-203ENST00000493683 L3MBTL1Q9Y468 752 aa21.49■■□□□ 1.03
RNF40-203ENST00000493683 COPS2P61201 443 aa21.48■■□□□ 1.03
RNF40-203ENST00000493683 AP2B1P63010 937 aa21.48■■□□□ 1.03
RNF40-203ENST00000493683 CTTNQ14247 550 aaKnown RBP21.48■■□□□ 1.03
RNF40-203ENST00000493683 TRMT10CQ7L0Y3 403 aaKnown RBP21.48■■□□□ 1.03
RNF40-203ENST00000493683 OSBPL9Q96SU4 736 aa21.48■■□□□ 1.03
RNF40-203ENST00000493683 TAF1DQ9H5J8 278 aaPredicted RBP21.48■■□□□ 1.03
RNF40-203ENST00000493683 ZBTB5O15062 677 aa21.48■■□□□ 1.03
RNF40-203ENST00000493683 TMED1Q13445 227 aa21.48■■□□□ 1.03
RNF40-203ENST00000493683 DRP2Q13474 957 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms