RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 PCDHA6Q9UN73 950 aa7.69□□□□□ -1.18
VPS52-219ENST00000493379 COG5Q9UP83 839 aa7.69□□□□□ -1.18
VPS52-219ENST00000493379 PCDHA8Q9Y5H6 950 aa7.69□□□□□ -1.18
VPS52-219ENST00000493379 UBIAD1Q9Y5Z9 338 aa7.69□□□□□ -1.18
VPS52-219ENST00000493379 MTCH2Q9Y6C9 303 aa7.69□□□□□ -1.18
VPS52-219ENST00000493379 ASH1LQ9NR48 2969 aaKnown RBP7.68□□□□□ -1.18
VPS52-219ENST00000493379 LCTP09848 1927 aa7.68□□□□□ -1.18
VPS52-219ENST00000493379 CYP3A7-CYP3A51PA0A087WV96 503 aa7.68□□□□□ -1.18
VPS52-219ENST00000493379 PRR23AA6NEV1 266 aa7.68□□□□□ -1.18
VPS52-219ENST00000493379 CYSRT1A8MQ03 144 aa7.68□□□□□ -1.18
VPS52-219ENST00000493379 DNM1LO00429 736 aa7.68□□□□□ -1.18
VPS52-219ENST00000493379 MEIS1O00470 390 aa7.68□□□□□ -1.18
VPS52-219ENST00000493379 ADAMTS3O15072 1205 aa7.68□□□□□ -1.18
VPS52-219ENST00000493379 LILRA1O75019 489 aa7.68□□□□□ -1.18
VPS52-219ENST00000493379 STAU1O95793 577 aaKnown RBP7.68□□□□□ -1.18
VPS52-219ENST00000493379 RARBP10826 455 aa7.68□□□□□ -1.18
VPS52-219ENST00000493379 IL9P15248 144 aa7.68□□□□□ -1.18
VPS52-219ENST00000493379 SMPD1P17405 629 aa7.68□□□□□ -1.18
VPS52-219ENST00000493379 ITGB5P18084 799 aa7.68□□□□□ -1.18
VPS52-219ENST00000493379 CYP3A7P24462 503 aa7.68□□□□□ -1.18
VPS52-219ENST00000493379 USP11P51784 963 aa7.68□□□□□ -1.18
VPS52-219ENST00000493379 ADCY7P51828 1080 aa7.68□□□□□ -1.18
VPS52-219ENST00000493379 NAPAP54920 295 aa7.68□□□□□ -1.18
VPS52-219ENST00000493379 GDF10P55107 478 aa7.68□□□□□ -1.18
VPS52-219ENST00000493379 HMGN5P82970 282 aaKnown RBP7.68□□□□□ -1.18
VPS52-219ENST00000493379 TNFAIP2Q03169 654 aa7.68□□□□□ -1.18
VPS52-219ENST00000493379 STK3Q13188 491 aa7.68□□□□□ -1.18
VPS52-219ENST00000493379 NR5A1Q13285 461 aa7.68□□□□□ -1.18
VPS52-219ENST00000493379 LRRC41Q15345 812 aa7.68□□□□□ -1.18
VPS52-219ENST00000493379 CCDC116Q8IYX3 515 aa7.68□□□□□ -1.18
VPS52-219ENST00000493379 NECAB1Q8N987 351 aa7.68□□□□□ -1.18
VPS52-219ENST00000493379 CCDC148Q8NFR7 591 aa7.68□□□□□ -1.18
VPS52-219ENST00000493379 IL31RAQ8NI17 732 aa7.68□□□□□ -1.18
VPS52-219ENST00000493379 PIBF1Q8WXW3 757 aa7.68□□□□□ -1.18
VPS52-219ENST00000493379 TNFRSF25Q93038 417 aa7.68□□□□□ -1.18
VPS52-219ENST00000493379 TMX3Q96JJ7 454 aa7.68□□□□□ -1.18
VPS52-219ENST00000493379 SEZ6LQ9BYH1 1024 aa7.68□□□□□ -1.18
VPS52-219ENST00000493379 WDR11Q9BZH6 1224 aa7.68□□□□□ -1.18
VPS52-219ENST00000493379 ORC3Q9UBD5 711 aaPredicted RBP7.68□□□□□ -1.18
VPS52-219ENST00000493379 PCDHA4Q9UN74 947 aa7.68□□□□□ -1.18
VPS52-219ENST00000493379 PHF24Q9UPV7 400 aa7.68□□□□□ -1.18
VPS52-219ENST00000493379 EP300Q09472 2414 aaPredicted RBP7.67□□□□□ -1.18
VPS52-219ENST00000493379 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.67□□□□□ -1.18
VPS52-219ENST00000493379 WNT7AO00755 349 aa7.67□□□□□ -1.18
VPS52-219ENST00000493379 ARIH2O95376 493 aa7.67□□□□□ -1.18
VPS52-219ENST00000493379 XBP1P17861 261 aa7.67□□□□□ -1.18
VPS52-219ENST00000493379 EIF2AK2P19525 551 aaKnown RBP7.67□□□□□ -1.18
VPS52-219ENST00000493379 CCND2P30279 289 aa7.67□□□□□ -1.18
VPS52-219ENST00000493379 ADCYAP1R1P41586 468 aa7.67□□□□□ -1.18
VPS52-219ENST00000493379 SP2Q02086 613 aa7.67□□□□□ -1.18
VPS52-219ENST00000493379 TTLL4Q14679 1199 aa7.67□□□□□ -1.18
VPS52-219ENST00000493379 SNX17Q15036 470 aa7.67□□□□□ -1.18
VPS52-219ENST00000493379 PPP1R26Q5T8A7 1209 aaPredicted RBP7.67□□□□□ -1.18
VPS52-219ENST00000493379 MOXD1Q6UVY6 613 aa7.67□□□□□ -1.18
VPS52-219ENST00000493379 DNAJC14Q6Y2X3 702 aaPredicted RBP7.67□□□□□ -1.18
VPS52-219ENST00000493379 SLC39A5Q6ZMH5 540 aa7.67□□□□□ -1.18
VPS52-219ENST00000493379 FCHSD1Q86WN1 690 aa7.67□□□□□ -1.18
VPS52-219ENST00000493379 FBXO16Q8IX29 292 aaPredicted RBP7.67□□□□□ -1.18
VPS52-219ENST00000493379 BLIDQ8IZY5 108 aa7.67□□□□□ -1.18
VPS52-219ENST00000493379 SLC43A3Q8NBI5 491 aa7.67□□□□□ -1.18
VPS52-219ENST00000493379 FBXO18Q8NFZ0 1043 aa7.67□□□□□ -1.18
VPS52-219ENST00000493379 GPRASP2Q96D09 838 aa7.67□□□□□ -1.18
VPS52-219ENST00000493379 INTS4Q96HW7 963 aaKnown RBP7.67□□□□□ -1.18
VPS52-219ENST00000493379 MBOAT7Q96N66 472 aa7.67□□□□□ -1.18
VPS52-219ENST00000493379 AIFM3Q96NN9 605 aa7.67□□□□□ -1.18
VPS52-219ENST00000493379 MXRA8Q9BRK3 442 aa7.67□□□□□ -1.18
VPS52-219ENST00000493379 JADE2Q9NQC1 790 aa7.67□□□□□ -1.18
VPS52-219ENST00000493379 VPS54Q9P1Q0 977 aa7.67□□□□□ -1.18
VPS52-219ENST00000493379 NAP1L2Q9ULW6 460 aaPredicted RBP7.67□□□□□ -1.18
VPS52-219ENST00000493379 DDX49Q9Y6V7 483 aaKnown RBP7.67□□□□□ -1.18
VPS52-219ENST00000493379 CEP250Q9BV73 2442 aa7.67□□□□□ -1.18
VPS52-219ENST00000493379 IGLV3-22A0A075B6J6 115 aa7.66□□□□□ -1.18
VPS52-219ENST00000493379 EPOPA6NHQ4 379 aa7.66□□□□□ -1.18
VPS52-219ENST00000493379 SPDYE3A6NKU9 549 aa7.66□□□□□ -1.18
VPS52-219ENST00000493379 BACH1O14867 736 aa7.66□□□□□ -1.18
VPS52-219ENST00000493379 FIBPO43427 364 aa7.66□□□□□ -1.18
VPS52-219ENST00000493379 JAK2O60674 1132 aa7.66□□□□□ -1.18
VPS52-219ENST00000493379 KPNA6O60684 536 aa7.66□□□□□ -1.18
VPS52-219ENST00000493379 PPFIA4O75335 1185 aa7.66□□□□□ -1.18
VPS52-219ENST00000493379 ABL1P00519 1130 aa7.66□□□□□ -1.18
VPS52-219ENST00000493379 TXNP10599 105 aaKnown RBP7.66□□□□□ -1.18
VPS52-219ENST00000493379 MYOGP15173 224 aa7.66□□□□□ -1.18
VPS52-219ENST00000493379 CNGA1P29973 690 aa7.66□□□□□ -1.18
VPS52-219ENST00000493379 CDK7P50613 346 aa7.66□□□□□ -1.18
VPS52-219ENST00000493379 ARHGAP4P98171 946 aa7.66□□□□□ -1.18
VPS52-219ENST00000493379 FPGSQ05932 587 aa7.66□□□□□ -1.18
VPS52-219ENST00000493379 ARHGAP1Q07960 439 aa7.66□□□□□ -1.18
VPS52-219ENST00000493379 LAMC2Q13753 1193 aa7.66□□□□□ -1.18
VPS52-219ENST00000493379 UBE2SQ16763 222 aa7.66□□□□□ -1.18
VPS52-219ENST00000493379 CEP55Q53EZ4 464 aa7.66□□□□□ -1.18
VPS52-219ENST00000493379 CELF3Q5SZQ8 465 aaKnown RBP7.66□□□□□ -1.18
VPS52-219ENST00000493379 TMEM63BQ5T3F8 832 aa7.66□□□□□ -1.18
VPS52-219ENST00000493379 GJC2Q5T442 439 aaPredicted RBP7.66□□□□□ -1.18
VPS52-219ENST00000493379 CAPN12Q6ZSI9 719 aa7.66□□□□□ -1.18
VPS52-219ENST00000493379 RNF180Q86T96 592 aa7.66□□□□□ -1.18
VPS52-219ENST00000493379 REXO1Q8N1G1 1221 aaKnown RBP7.66□□□□□ -1.18
VPS52-219ENST00000493379 PCSK9Q8NBP7 692 aaKnown RBP7.66□□□□□ -1.18
VPS52-219ENST00000493379 CDHR1Q96JP9 859 aa7.66□□□□□ -1.18
VPS52-219ENST00000493379 MRGPRX2Q96LB1 330 aa7.66□□□□□ -1.18
VPS52-219ENST00000493379 ALG1Q9BT22 464 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms