RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 CATSPER3Q86XQ3 398 aa14.28□□□□□ -0.12
CLIP2-209ENST00000493166 EXOC8Q8IYI6 725 aa14.28□□□□□ -0.12
CLIP2-209ENST00000493166 LINC01465Q8N7H1 131 aa14.28□□□□□ -0.12
CLIP2-209ENST00000493166 SNX29Q8TEQ0 813 aa14.28□□□□□ -0.12
CLIP2-209ENST00000493166 SLC7A3Q8WY07 619 aa14.28□□□□□ -0.12
CLIP2-209ENST00000493166 SEPT8Q92599 483 aa14.28□□□□□ -0.12
CLIP2-209ENST00000493166 CEP89Q96ST8 783 aa14.28□□□□□ -0.12
CLIP2-209ENST00000493166 PPP1R16BQ96T49 567 aa14.28□□□□□ -0.12
CLIP2-209ENST00000493166 IFIH1Q9BYX4 1025 aaKnown RBP14.28□□□□□ -0.12
CLIP2-209ENST00000493166 CELF4Q9BZC1 486 aaKnown RBP14.28□□□□□ -0.12
CLIP2-209ENST00000493166 OSBPL7Q9BZF2 842 aa14.28□□□□□ -0.12
CLIP2-209ENST00000493166 ANKEF1Q9NU02 776 aa14.28□□□□□ -0.12
CLIP2-209ENST00000493166 SLC4A7Q9Y6M7 1214 aa14.28□□□□□ -0.12
CLIP2-209ENST00000493166 KDM3AQ9Y4C1 1321 aa14.27□□□□□ -0.12
CLIP2-209ENST00000493166 MAFO75444 373 aaPredicted RBP14.27□□□□□ -0.13
CLIP2-209ENST00000493166 KCNJ6P48051 423 aa14.27□□□□□ -0.13
CLIP2-209ENST00000493166 FXR1P51114 621 aaKnown RBP eCLIP14.27□□□□□ -0.13
CLIP2-209ENST00000493166 IKBKEQ14164 716 aa14.27□□□□□ -0.13
CLIP2-209ENST00000493166 LPIN1Q14693 890 aa14.27□□□□□ -0.13
CLIP2-209ENST00000493166 KIZQ2M2Z5 673 aa14.27□□□□□ -0.13
CLIP2-209ENST00000493166 FBXO47Q5MNV8 452 aa14.27□□□□□ -0.13
CLIP2-209ENST00000493166 FOXD4L5Q5VV16 416 aaPredicted RBP14.27□□□□□ -0.13
CLIP2-209ENST00000493166 KRT79Q5XKE5 535 aa14.27□□□□□ -0.13
CLIP2-209ENST00000493166 TSHZ1Q6ZSZ6 1077 aa14.27□□□□□ -0.13
CLIP2-209ENST00000493166 ZNF579Q8NAF0 562 aaKnown RBP14.27□□□□□ -0.13
CLIP2-209ENST00000493166 DBF4BQ8NFT6 615 aa14.27□□□□□ -0.13
CLIP2-209ENST00000493166 PIGOQ8TEQ8 1089 aa14.27□□□□□ -0.13
CLIP2-209ENST00000493166 FOXD4L4Q8WXT5 416 aaPredicted RBP14.27□□□□□ -0.13
CLIP2-209ENST00000493166 APBB2Q92870 758 aa14.27□□□□□ -0.13
CLIP2-209ENST00000493166 BMP2KQ9NSY1 1161 aaPredicted RBP14.27□□□□□ -0.13
CLIP2-209ENST00000493166 CLIC4Q9Y696 253 aa14.27□□□□□ -0.13
CLIP2-209ENST00000493166 IGKV6-21A0A0C4DH24 114 aa14.26□□□□□ -0.13
CLIP2-209ENST00000493166 ABHD14A-ACY1A0A1B0GW23 586 aa14.26□□□□□ -0.13
CLIP2-209ENST00000493166 PP2D1A8MPX8 630 aa14.26□□□□□ -0.13
CLIP2-209ENST00000493166 RBAK-RBAKDNI3L0D1 243 aa14.26□□□□□ -0.13
CLIP2-209ENST00000493166 SOX1O00570 391 aaPredicted RBP14.26□□□□□ -0.13
CLIP2-209ENST00000493166 EFCAB14O75071 495 aa14.26□□□□□ -0.13
CLIP2-209ENST00000493166 ZSCAN22P10073 491 aaPredicted RBP14.26□□□□□ -0.13
CLIP2-209ENST00000493166 XRCC6P12956 609 aaKnown RBP eCLIP14.26□□□□□ -0.13
CLIP2-209ENST00000493166 MUTP22033 750 aa14.26□□□□□ -0.13
CLIP2-209ENST00000493166 RARRES1P49788 294 aa14.26□□□□□ -0.13
CLIP2-209ENST00000493166 NLRP11P59045 1033 aaKnown RBP14.26□□□□□ -0.13
CLIP2-209ENST00000493166 CEBPZQ03701 1054 aaKnown RBP14.26□□□□□ -0.13
CLIP2-209ENST00000493166 DRP2Q13474 957 aa14.26□□□□□ -0.13
CLIP2-209ENST00000493166 EMC2Q15006 297 aa14.26□□□□□ -0.13
CLIP2-209ENST00000493166 TCTN1Q2MV58 587 aa14.26□□□□□ -0.13
CLIP2-209ENST00000493166 ZNF710Q8N1W2 664 aa14.26□□□□□ -0.13
CLIP2-209ENST00000493166 USP38Q8NB14 1042 aa14.26□□□□□ -0.13
CLIP2-209ENST00000493166 SCLT1Q96NL6 688 aa14.26□□□□□ -0.13
CLIP2-209ENST00000493166 NACC1Q96RE7 527 aa14.26□□□□□ -0.13
CLIP2-209ENST00000493166 OSMRQ99650 979 aa14.26□□□□□ -0.13
CLIP2-209ENST00000493166 DHX33Q9H6R0 707 aaKnown RBP14.26□□□□□ -0.13
CLIP2-209ENST00000493166 SUCLA2Q9P2R7 463 aaPredicted RBP14.26□□□□□ -0.13
CLIP2-209ENST00000493166 SQORQ9Y6N5 450 aa14.26□□□□□ -0.13
CLIP2-209ENST00000493166 CHD9Q3L8U1 2897 aa14.26□□□□□ -0.13
CLIP2-209ENST00000493166 A0A087WWV3 80 aa14.25□□□□□ -0.13
CLIP2-209ENST00000493166 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.25□□□□□ -0.13
CLIP2-209ENST00000493166 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.25□□□□□ -0.13
CLIP2-209ENST00000493166 GAS2O43903 313 aaKnown RBP14.25□□□□□ -0.13
CLIP2-209ENST00000493166 GPR32O75388 356 aa14.25□□□□□ -0.13
CLIP2-209ENST00000493166 F13A1P00488 732 aa14.25□□□□□ -0.13
CLIP2-209ENST00000493166 ATP2A2P16615 1042 aaKnown RBP14.25□□□□□ -0.13
CLIP2-209ENST00000493166 CDC25AP30304 524 aa14.25□□□□□ -0.13
CLIP2-209ENST00000493166 CD52P31358 61 aa14.25□□□□□ -0.13
CLIP2-209ENST00000493166 CRYBB1P53674 252 aaPredicted RBP14.25□□□□□ -0.13
CLIP2-209ENST00000493166 WDR5P61964 334 aaKnown RBP14.25□□□□□ -0.13
CLIP2-209ENST00000493166 SMAD3P84022 425 aaKnown RBP14.25□□□□□ -0.13
CLIP2-209ENST00000493166 PAK2Q13177 524 aa14.25□□□□□ -0.13
CLIP2-209ENST00000493166 MKRN4PQ13434 485 aaPredicted RBP14.25□□□□□ -0.13
CLIP2-209ENST00000493166 PKP1Q13835 747 aa14.25□□□□□ -0.13
CLIP2-209ENST00000493166 FAM109BQ6ICB4 259 aaPredicted RBP14.25□□□□□ -0.13
CLIP2-209ENST00000493166 NLRP7Q8WX94 980 aa14.25□□□□□ -0.13
CLIP2-209ENST00000493166 LRCH3Q96II8 777 aa14.25□□□□□ -0.13
CLIP2-209ENST00000493166 USP28Q96RU2 1077 aa14.25□□□□□ -0.13
CLIP2-209ENST00000493166 SLC9A7Q96T83 725 aa14.25□□□□□ -0.13
CLIP2-209ENST00000493166 MTRQ99707 1265 aa14.25□□□□□ -0.13
CLIP2-209ENST00000493166 AGO3Q9H9G7 860 aaKnown RBP14.25□□□□□ -0.13
CLIP2-209ENST00000493166 CDHR5Q9HBB8 845 aa14.25□□□□□ -0.13
CLIP2-209ENST00000493166 ATP6V0A4Q9HBG4 840 aa14.25□□□□□ -0.13
CLIP2-209ENST00000493166 DDX19AQ9NUU7 478 aaKnown RBP14.25□□□□□ -0.13
CLIP2-209ENST00000493166 DBR1Q9UK59 544 aaKnown RBP14.25□□□□□ -0.13
CLIP2-209ENST00000493166 KIAA1024Q9UPX6 916 aa14.25□□□□□ -0.13
CLIP2-209ENST00000493166 ARHGEF35A5YM69 484 aa14.24□□□□□ -0.13
CLIP2-209ENST00000493166 GRXCR1A8MXD5 290 aa14.24□□□□□ -0.13
CLIP2-209ENST00000493166 RPS6KA5O75582 802 aa14.24□□□□□ -0.13
CLIP2-209ENST00000493166 DGAT1O75907 488 aa14.24□□□□□ -0.13
CLIP2-209ENST00000493166 GPC3P51654 580 aa14.24□□□□□ -0.13
CLIP2-209ENST00000493166 CDC42EP1Q00587 391 aa14.24□□□□□ -0.13
CLIP2-209ENST00000493166 PTPAQ15257 358 aa14.24□□□□□ -0.13
CLIP2-209ENST00000493166 ZRSR1Q15695 479 aaKnown RBP14.24□□□□□ -0.13
CLIP2-209ENST00000493166 ECM1Q16610 540 aa14.24□□□□□ -0.13
CLIP2-209ENST00000493166 ODR4Q5SWX8 454 aa14.24□□□□□ -0.13
CLIP2-209ENST00000493166 RHPN2Q8IUC4 686 aa14.24□□□□□ -0.13
CLIP2-209ENST00000493166 TCP11Q8WWU5 503 aa14.24□□□□□ -0.13
CLIP2-209ENST00000493166 PSPC1Q8WXF1 523 aaKnown RBP14.24□□□□□ -0.13
CLIP2-209ENST00000493166 TMEM143Q96AN5 459 aa14.24□□□□□ -0.13
CLIP2-209ENST00000493166 ZNF668Q96K58 619 aaPredicted RBP14.24□□□□□ -0.13
CLIP2-209ENST00000493166 AK8Q96MA6 479 aa14.24□□□□□ -0.13
CLIP2-209ENST00000493166 ZNF396Q96N95 335 aaPredicted RBP14.24□□□□□ -0.13
CLIP2-209ENST00000493166 MMTAG2Q9BU76 263 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms