RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 PLXNA3P51805 1871 aa12.53□□□□□ -0.4
SND1-215ENST00000492772 CFAP54Q96N23 3096 aa12.52□□□□□ -0.4
SND1-215ENST00000492772 MEIS1O00470 390 aa12.52□□□□□ -0.41
SND1-215ENST00000492772 CCNE2O96020 404 aa12.52□□□□□ -0.41
SND1-215ENST00000492772 FGFR1P11362 822 aa12.52□□□□□ -0.41
SND1-215ENST00000492772 SREBF1P36956 1147 aa12.52□□□□□ -0.41
SND1-215ENST00000492772 FAM189BP81408 668 aa12.52□□□□□ -0.41
SND1-215ENST00000492772 MTMR3Q13615 1198 aa12.52□□□□□ -0.41
SND1-215ENST00000492772 KIZQ2M2Z5 673 aa12.52□□□□□ -0.41
SND1-215ENST00000492772 TPRNQ4KMQ1 711 aa12.52□□□□□ -0.41
SND1-215ENST00000492772 MIS18BP1Q6P0N0 1132 aa12.52□□□□□ -0.41
SND1-215ENST00000492772 PDXDC2PQ6P474 469 aa12.52□□□□□ -0.41
SND1-215ENST00000492772 SGMS1Q86VZ5 419 aa12.52□□□□□ -0.41
SND1-215ENST00000492772 FAM228AQ86W67 206 aa12.52□□□□□ -0.41
SND1-215ENST00000492772 RAB11FIP4Q86YS3 637 aa12.52□□□□□ -0.41
SND1-215ENST00000492772 CCDC60Q8IWA6 550 aaPredicted RBP12.52□□□□□ -0.41
SND1-215ENST00000492772 UBALD2Q8IYN6 164 aa12.52□□□□□ -0.41
SND1-215ENST00000492772 CASP10Q92851 521 aa12.52□□□□□ -0.41
SND1-215ENST00000492772 PGBD1Q96JS3 809 aa12.52□□□□□ -0.41
SND1-215ENST00000492772 ZNF558Q96NG5 402 aa12.52□□□□□ -0.41
SND1-215ENST00000492772 NECTIN4Q96NY8 510 aa12.52□□□□□ -0.41
SND1-215ENST00000492772 OSMRQ99650 979 aa12.52□□□□□ -0.41
SND1-215ENST00000492772 CDHR5Q9HBB8 845 aa12.52□□□□□ -0.41
SND1-215ENST00000492772 ZNF302Q9NR11 478 aa12.52□□□□□ -0.41
SND1-215ENST00000492772 RBM28Q9NW13 759 aaKnown RBP12.52□□□□□ -0.41
SND1-215ENST00000492772 HCSTQ9UBK5 93 aa12.52□□□□□ -0.41
SND1-215ENST00000492772 MYH9P35579 1960 aaKnown RBP12.52□□□□□ -0.41
SND1-215ENST00000492772 ZFHX2Q9C0A1 2572 aaPredicted RBP12.51□□□□□ -0.41
SND1-215ENST00000492772 ZBTB42B2RXF5 422 aa12.51□□□□□ -0.41
SND1-215ENST00000492772 DDX39AO00148 427 aaKnown RBP12.51□□□□□ -0.41
SND1-215ENST00000492772 C22orf31O95567 290 aa12.51□□□□□ -0.41
SND1-215ENST00000492772 ZNF76P36508 570 aa12.51□□□□□ -0.41
SND1-215ENST00000492772 KRT17Q04695 432 aa12.51□□□□□ -0.41
SND1-215ENST00000492772 APOBRQ0VD83 1088 aa12.51□□□□□ -0.41
SND1-215ENST00000492772 DSC3Q14574 896 aa12.51□□□□□ -0.41
SND1-215ENST00000492772 LLGL2Q6P1M3 1020 aa12.51□□□□□ -0.41
SND1-215ENST00000492772 SYCE2Q6PIF2 218 aa12.51□□□□□ -0.41
SND1-215ENST00000492772 KCNT2Q6UVM3 1135 aa12.51□□□□□ -0.41
SND1-215ENST00000492772 SYNE3Q6ZMZ3 975 aa12.51□□□□□ -0.41
SND1-215ENST00000492772 ABI1Q8IZP0 508 aa12.51□□□□□ -0.41
SND1-215ENST00000492772 BBXQ8WY36 941 aaPredicted RBP12.51□□□□□ -0.41
SND1-215ENST00000492772 RIPOR3Q96MK2 946 aa12.51□□□□□ -0.41
SND1-215ENST00000492772 CEP131Q9UPN4 1083 aa12.51□□□□□ -0.41
SND1-215ENST00000492772 SORCS3Q9UPU3 1222 aa12.51□□□□□ -0.41
SND1-215ENST00000492772 HIDE1A8MVS5 230 aa12.5□□□□□ -0.41
SND1-215ENST00000492772 PROB1E7EW31 1015 aa12.5□□□□□ -0.41
SND1-215ENST00000492772 GALR2O43603 387 aaPredicted RBP12.5□□□□□ -0.41
SND1-215ENST00000492772 FOXK2Q01167 660 aa12.5□□□□□ -0.41
SND1-215ENST00000492772 ITIH3Q06033 890 aa12.5□□□□□ -0.41
SND1-215ENST00000492772 SMC1AQ14683 1233 aaKnown RBP12.5□□□□□ -0.41
SND1-215ENST00000492772 CES5AQ6NT32 575 aa12.5□□□□□ -0.41
SND1-215ENST00000492772 TYW1BQ6NUM6 668 aa12.5□□□□□ -0.41
SND1-215ENST00000492772 TMC7Q7Z402 723 aa12.5□□□□□ -0.41
SND1-215ENST00000492772 CKAP2LQ8IYA6 745 aa12.5□□□□□ -0.41
SND1-215ENST00000492772 SMAP1Q8IYB5 467 aaPredicted RBP12.5□□□□□ -0.41
SND1-215ENST00000492772 ZNF710Q8N1W2 664 aa12.5□□□□□ -0.41
SND1-215ENST00000492772 METTL13Q8N6R0 699 aa12.5□□□□□ -0.41
SND1-215ENST00000492772 KREMEN2Q8NCW0 462 aa12.5□□□□□ -0.41
SND1-215ENST00000492772 CASD1Q96PB1 797 aa12.5□□□□□ -0.41
SND1-215ENST00000492772 MAP7D2Q96T17 732 aa12.5□□□□□ -0.41
SND1-215ENST00000492772 PPP1R16BQ96T49 567 aa12.5□□□□□ -0.41
SND1-215ENST00000492772 APOL5Q9BWW9 433 aa12.5□□□□□ -0.41
SND1-215ENST00000492772 TSHZ2Q9NRE2 1034 aa12.5□□□□□ -0.41
SND1-215ENST00000492772 SPG21Q9NZD8 308 aa12.5□□□□□ -0.41
SND1-215ENST00000492772 TCEAL9Q9UHQ7 104 aa12.5□□□□□ -0.41
SND1-215ENST00000492772 IPO5O00410 1097 aaKnown RBP12.49□□□□□ -0.41
SND1-215ENST00000492772 SLC27A2O14975 620 aa12.49□□□□□ -0.41
SND1-215ENST00000492772 GPR32O75388 356 aa12.49□□□□□ -0.41
SND1-215ENST00000492772 PDGFBP01127 241 aaPredicted RBP12.49□□□□□ -0.41
SND1-215ENST00000492772 VTNP04004 478 aa12.49□□□□□ -0.41
SND1-215ENST00000492772 ZSCAN20P17040 1043 aaPredicted RBP12.49□□□□□ -0.41
SND1-215ENST00000492772 SP100P23497 879 aaPredicted RBP12.49□□□□□ -0.41
SND1-215ENST00000492772 MTHFRP42898 656 aa12.49□□□□□ -0.41
SND1-215ENST00000492772 CLK2P49760 499 aaKnown RBP12.49□□□□□ -0.41
SND1-215ENST00000492772 SETQ01105 290 aaPredicted RBP12.49□□□□□ -0.41
SND1-215ENST00000492772 ZNF746Q6NUN9 644 aaPredicted RBP12.49□□□□□ -0.41
SND1-215ENST00000492772 SWSAP1Q6NVH7 229 aa12.49□□□□□ -0.41
SND1-215ENST00000492772 APOA5Q6Q788 366 aa12.49□□□□□ -0.41
SND1-215ENST00000492772 PLA2G4DQ86XP0 818 aa12.49□□□□□ -0.41
SND1-215ENST00000492772 FAM167AQ96KS9 214 aa12.49□□□□□ -0.41
SND1-215ENST00000492772 MRPL9Q9BYD2 267 aaKnown RBP12.49□□□□□ -0.41
SND1-215ENST00000492772 LSG1Q9H089 658 aaKnown RBP12.49□□□□□ -0.41
SND1-215ENST00000492772 ADAM7Q9H2U9 754 aa12.49□□□□□ -0.41
SND1-215ENST00000492772 TBC1D22BQ9NU19 505 aa12.49□□□□□ -0.41
SND1-215ENST00000492772 RNF19AQ9NV58 838 aa12.49□□□□□ -0.41
SND1-215ENST00000492772 BARHL2Q9NY43 387 aa12.49□□□□□ -0.41
SND1-215ENST00000492772 MAFBQ9Y5Q3 323 aaPredicted RBP12.49□□□□□ -0.41
SND1-215ENST00000492772 HCFC2Q9Y5Z7 792 aa12.49□□□□□ -0.41
SND1-215ENST00000492772 WDR81Q562E7 1941 aa12.49□□□□□ -0.41
SND1-215ENST00000492772 DENND4AQ7Z401 1863 aa12.48□□□□□ -0.41
SND1-215ENST00000492772 IGLV3-22A0A075B6J6 115 aa12.48□□□□□ -0.41
SND1-215ENST00000492772 SMCO2A6NFE2 343 aa12.48□□□□□ -0.41
SND1-215ENST00000492772 FAM86B1E9PN63 330 aa12.48□□□□□ -0.41
SND1-215ENST00000492772 H0Y858 1186 aa12.48□□□□□ -0.41
SND1-215ENST00000492772 MAGEB2O15479 319 aa12.48□□□□□ -0.41
SND1-215ENST00000492772 DHX15O43143 795 aaKnown RBP12.48□□□□□ -0.41
SND1-215ENST00000492772 PSAPP07602 524 aa12.48□□□□□ -0.41
SND1-215ENST00000492772 FAM86B2P0C5J1 330 aa12.48□□□□□ -0.41
SND1-215ENST00000492772 ATP4AP20648 1035 aa12.48□□□□□ -0.41
SND1-215ENST00000492772 TMOD1P28289 359 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms