RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 ANAPC15P60006 121 aa9.47□□□□□ -0.89
SMARCB1-207ENST00000491967 HYAL1Q12794 435 aa9.47□□□□□ -0.89
SMARCB1-207ENST00000491967 TMEM266Q2M3C6 531 aa9.47□□□□□ -0.89
SMARCB1-207ENST00000491967 ODR4Q5SWX8 454 aa9.47□□□□□ -0.89
SMARCB1-207ENST00000491967 ERICH6BQ5W0A0 696 aa9.47□□□□□ -0.89
SMARCB1-207ENST00000491967 FAM228AQ86W67 206 aa9.47□□□□□ -0.89
SMARCB1-207ENST00000491967 BLIDQ8IZY5 108 aa9.47□□□□□ -0.89
SMARCB1-207ENST00000491967 TBCKQ8TEA7 893 aa9.47□□□□□ -0.89
SMARCB1-207ENST00000491967 KHSRPQ92945 711 aaKnown RBP eCLIP9.47□□□□□ -0.89
SMARCB1-207ENST00000491967 UIMC1Q96RL1 719 aa9.47□□□□□ -0.89
SMARCB1-207ENST00000491967 PHF20Q9BVI0 1012 aa9.47□□□□□ -0.89
SMARCB1-207ENST00000491967 C1QTNF1Q9BXJ1 281 aa9.47□□□□□ -0.89
SMARCB1-207ENST00000491967 UPF3BQ9BZI7 483 aaKnown RBP9.47□□□□□ -0.89
SMARCB1-207ENST00000491967 NRBP2Q9NSY0 501 aa9.47□□□□□ -0.89
SMARCB1-207ENST00000491967 RNF216Q9NWF9 866 aaPredicted RBP9.47□□□□□ -0.89
SMARCB1-207ENST00000491967 GABBR1Q9UBS5 961 aa9.47□□□□□ -0.89
SMARCB1-207ENST00000491967 C19orf67A6NJJ6 358 aa9.46□□□□□ -0.9
SMARCB1-207ENST00000491967 PFKFB2O60825 505 aa9.46□□□□□ -0.9
SMARCB1-207ENST00000491967 OATP04181 439 aa9.46□□□□□ -0.9
SMARCB1-207ENST00000491967 EIF4BP23588 611 aaKnown RBP9.46□□□□□ -0.9
SMARCB1-207ENST00000491967 NLRP5P59047 1200 aa9.46□□□□□ -0.9
SMARCB1-207ENST00000491967 SCRN1Q12765 414 aa9.46□□□□□ -0.9
SMARCB1-207ENST00000491967 ADAM15Q13444 863 aa9.46□□□□□ -0.9
SMARCB1-207ENST00000491967 UGCGQ16739 394 aa9.46□□□□□ -0.9
SMARCB1-207ENST00000491967 KIZQ2M2Z5 673 aa9.46□□□□□ -0.9
SMARCB1-207ENST00000491967 PPP4R3AQ6IN85 833 aa9.46□□□□□ -0.9
SMARCB1-207ENST00000491967 PTCRAQ6ISU1 281 aaPredicted RBP9.46□□□□□ -0.9
SMARCB1-207ENST00000491967 EFCAB12Q6NXP0 572 aa9.46□□□□□ -0.9
SMARCB1-207ENST00000491967 AIFM3Q96NN9 605 aa9.46□□□□□ -0.9
SMARCB1-207ENST00000491967 ADAM2Q99965 735 aa9.46□□□□□ -0.9
SMARCB1-207ENST00000491967 TRAIPQ9BWF2 469 aa9.46□□□□□ -0.9
SMARCB1-207ENST00000491967 UNC45AQ9H3U1 944 aa9.46□□□□□ -0.9
SMARCB1-207ENST00000491967 EPHX3Q9H6B9 360 aa9.46□□□□□ -0.9
SMARCB1-207ENST00000491967 KCNMB3Q9NPA1 279 aa9.46□□□□□ -0.9
SMARCB1-207ENST00000491967 C11orf16Q9NQ32 467 aa9.46□□□□□ -0.9
SMARCB1-207ENST00000491967 PDRG1Q9NUG6 133 aa9.46□□□□□ -0.9
SMARCB1-207ENST00000491967 RNF19AQ9NV58 838 aa9.46□□□□□ -0.9
SMARCB1-207ENST00000491967 TMEM161AQ9NX61 479 aa9.46□□□□□ -0.9
SMARCB1-207ENST00000491967 PRKAG3Q9UGI9 489 aa9.46□□□□□ -0.9
SMARCB1-207ENST00000491967 ARIH1Q9Y4X5 557 aaPredicted RBP9.46□□□□□ -0.9
SMARCB1-207ENST00000491967 STK36Q9NRP7 1315 aa9.46□□□□□ -0.9
SMARCB1-207ENST00000491967 GAS7O60861 476 aa9.45□□□□□ -0.9
SMARCB1-207ENST00000491967 GPR37L1O60883 481 aa9.45□□□□□ -0.9
SMARCB1-207ENST00000491967 CTDNEP1O95476 244 aa9.45□□□□□ -0.9
SMARCB1-207ENST00000491967 TDP2O95551 362 aa9.45□□□□□ -0.9
SMARCB1-207ENST00000491967 VTNP04004 478 aa9.45□□□□□ -0.9
SMARCB1-207ENST00000491967 DARSP14868 501 aaKnown RBP9.45□□□□□ -0.9
SMARCB1-207ENST00000491967 IL9P15248 144 aa9.45□□□□□ -0.9
SMARCB1-207ENST00000491967 TMOD1P28289 359 aa9.45□□□□□ -0.9
SMARCB1-207ENST00000491967 PLA2G5P39877 138 aa9.45□□□□□ -0.9
SMARCB1-207ENST00000491967 NLRP11P59045 1033 aaKnown RBP9.45□□□□□ -0.9
SMARCB1-207ENST00000491967 CDC42EP1Q00587 391 aa9.45□□□□□ -0.9
SMARCB1-207ENST00000491967 PRKCEQ02156 737 aa9.45□□□□□ -0.9
SMARCB1-207ENST00000491967 UBE3AQ05086 875 aa9.45□□□□□ -0.9
SMARCB1-207ENST00000491967 NFX1Q12986 1120 aaKnown RBP9.45□□□□□ -0.9
SMARCB1-207ENST00000491967 XKR3Q5GH77 459 aa9.45□□□□□ -0.9
SMARCB1-207ENST00000491967 FAM102BQ5T8I3 360 aa9.45□□□□□ -0.9
SMARCB1-207ENST00000491967 LRCH2Q5VUJ6 765 aa9.45□□□□□ -0.9
SMARCB1-207ENST00000491967 KRT25Q7Z3Z0 450 aa9.45□□□□□ -0.9
SMARCB1-207ENST00000491967 ZNF598Q86UK7 904 aaKnown RBP9.45□□□□□ -0.9
SMARCB1-207ENST00000491967 CKAP2LQ8IYA6 745 aa9.45□□□□□ -0.9
SMARCB1-207ENST00000491967 GJD3Q8N144 294 aa9.45□□□□□ -0.9
SMARCB1-207ENST00000491967 KLHL23Q8NBE8 558 aa9.45□□□□□ -0.9
SMARCB1-207ENST00000491967 GJA10Q969M2 543 aa9.45□□□□□ -0.9
SMARCB1-207ENST00000491967 MSLNLQ96KJ4 702 aa9.45□□□□□ -0.9
SMARCB1-207ENST00000491967 FAM20AQ96MK3 541 aa9.45□□□□□ -0.9
SMARCB1-207ENST00000491967 OSMRQ99650 979 aa9.45□□□□□ -0.9
SMARCB1-207ENST00000491967 LARP6Q9BRS8 491 aaKnown RBP9.45□□□□□ -0.9
SMARCB1-207ENST00000491967 TEKT3Q9BXF9 490 aa9.45□□□□□ -0.9
SMARCB1-207ENST00000491967 CWH43Q9H720 699 aa9.45□□□□□ -0.9
SMARCB1-207ENST00000491967 ALG13Q9NP73 1137 aaKnown RBP9.45□□□□□ -0.9
SMARCB1-207ENST00000491967 TPCN1Q9ULQ1 816 aa9.45□□□□□ -0.9
SMARCB1-207ENST00000491967 PCDHB7Q9Y5E2 793 aa9.45□□□□□ -0.9
SMARCB1-207ENST00000491967 A0A0U1RQF3 1178 aa9.44□□□□□ -0.9
SMARCB1-207ENST00000491967 H3BQ06 376 aaPredicted RBP9.44□□□□□ -0.9
SMARCB1-207ENST00000491967 CPLX1O14810 134 aa9.44□□□□□ -0.9
SMARCB1-207ENST00000491967 FSCN2O14926 492 aa9.44□□□□□ -0.9
SMARCB1-207ENST00000491967 TBX3O15119 743 aa9.44□□□□□ -0.9
SMARCB1-207ENST00000491967 EYA4O95677 639 aa9.44□□□□□ -0.9
SMARCB1-207ENST00000491967 FDPSP14324 419 aaKnown RBP9.44□□□□□ -0.9
SMARCB1-207ENST00000491967 GATMP50440 423 aa9.44□□□□□ -0.9
SMARCB1-207ENST00000491967 GPC3P51654 580 aa9.44□□□□□ -0.9
SMARCB1-207ENST00000491967 CLCN3P51790 818 aa9.44□□□□□ -0.9
SMARCB1-207ENST00000491967 ZP2Q05996 745 aa9.44□□□□□ -0.9
SMARCB1-207ENST00000491967 DLX2Q07687 328 aaPredicted RBP9.44□□□□□ -0.9
SMARCB1-207ENST00000491967 PPP2R5CQ13362 524 aa9.44□□□□□ -0.9
SMARCB1-207ENST00000491967 NONOQ15233 471 aaKnown RBP eCLIP9.44□□□□□ -0.9
SMARCB1-207ENST00000491967 SMAD2Q15796 467 aaKnown RBP9.44□□□□□ -0.9
SMARCB1-207ENST00000491967 CSPP1Q1MSJ5 1256 aa9.44□□□□□ -0.9
SMARCB1-207ENST00000491967 CPLX2Q6PUV4 134 aaKnown RBP9.44□□□□□ -0.9
SMARCB1-207ENST00000491967 LRRC55Q6ZSA7 311 aa9.44□□□□□ -0.9
SMARCB1-207ENST00000491967 METTL13Q8N6R0 699 aa9.44□□□□□ -0.9
SMARCB1-207ENST00000491967 EFHBQ8N7U6 833 aa9.44□□□□□ -0.9
SMARCB1-207ENST00000491967 HAS1Q92839 578 aa9.44□□□□□ -0.9
SMARCB1-207ENST00000491967 TNFRSF25Q93038 417 aa9.44□□□□□ -0.9
SMARCB1-207ENST00000491967 CASD1Q96PB1 797 aa9.44□□□□□ -0.9
SMARCB1-207ENST00000491967 PPP4R2Q9NY27 417 aa9.44□□□□□ -0.9
SMARCB1-207ENST00000491967 TCEAL9Q9UHQ7 104 aa9.44□□□□□ -0.9
SMARCB1-207ENST00000491967 VAV3Q9UKW4 847 aa9.44□□□□□ -0.9
SMARCB1-207ENST00000491967 GINS2Q9Y248 185 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms