RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 TARBP2Q15633 366 aaKnown RBP20.29■□□□□ 0.84
HMGN1-219ENST00000491183 EARS2Q5JPH6 523 aaKnown RBP20.29■□□□□ 0.84
HMGN1-219ENST00000491183 FAM228AQ86W67 206 aa20.29■□□□□ 0.84
HMGN1-219ENST00000491183 LRRC71Q8N4P6 559 aa20.29■□□□□ 0.84
HMGN1-219ENST00000491183 GTF3C6Q969F1 213 aa20.29■□□□□ 0.84
HMGN1-219ENST00000491183 TTC28Q96AY4 2481 aa20.28■□□□□ 0.84
HMGN1-219ENST00000491183 RB1P06400 928 aa20.28■□□□□ 0.84
HMGN1-219ENST00000491183 CTNNB1P35222 781 aa20.28■□□□□ 0.84
HMGN1-219ENST00000491183 GATMP50440 423 aa20.28■□□□□ 0.84
HMGN1-219ENST00000491183 NLRP11P59045 1033 aaKnown RBP20.28■□□□□ 0.84
HMGN1-219ENST00000491183 PPP4R3AQ6IN85 833 aa20.28■□□□□ 0.84
HMGN1-219ENST00000491183 PIK3AP1Q6ZUJ8 805 aa20.28■□□□□ 0.84
HMGN1-219ENST00000491183 NEK8Q86SG6 692 aa20.28■□□□□ 0.84
HMGN1-219ENST00000491183 NECAB3Q96P71 396 aaPredicted RBP20.28■□□□□ 0.84
HMGN1-219ENST00000491183 CEP89Q96ST8 783 aa20.28■□□□□ 0.84
HMGN1-219ENST00000491183 ADAM2Q99965 735 aa20.28■□□□□ 0.84
HMGN1-219ENST00000491183 NIFKQ9BYG3 293 aaKnown RBP20.28■□□□□ 0.84
HMGN1-219ENST00000491183 ADAMTS10Q9H324 1103 aa20.28■□□□□ 0.84
HMGN1-219ENST00000491183 KCNMB3Q9NPA1 279 aa20.28■□□□□ 0.84
HMGN1-219ENST00000491183 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.27■□□□□ 0.84
HMGN1-219ENST00000491183 TMEM150BA6NC51 233 aa20.27■□□□□ 0.84
HMGN1-219ENST00000491183 FAM205CA6NFA0 338 aa20.27■□□□□ 0.84
HMGN1-219ENST00000491183 TNFRSF10AO00220 468 aa20.27■□□□□ 0.84
HMGN1-219ENST00000491183 EML1O00423 815 aa20.27■□□□□ 0.84
HMGN1-219ENST00000491183 GPR182O15218 404 aa20.27■□□□□ 0.84
HMGN1-219ENST00000491183 STAG3L1P0CL83 205 aa20.27■□□□□ 0.84
HMGN1-219ENST00000491183 SARSP49591 514 aaKnown RBP20.27■□□□□ 0.84
HMGN1-219ENST00000491183 PTPROQ16827 1216 aa20.27■□□□□ 0.84
HMGN1-219ENST00000491183 FAM43BQ6ZT52 329 aaPredicted RBP20.27■□□□□ 0.84
HMGN1-219ENST00000491183 CMTR2Q8IYT2 770 aaKnown RBP20.27■□□□□ 0.84
HMGN1-219ENST00000491183 NSUN7Q8NE18 718 aaKnown RBP20.27■□□□□ 0.84
HMGN1-219ENST00000491183 IL27Q8NEV9 243 aa20.27■□□□□ 0.84
HMGN1-219ENST00000491183 WASF1Q92558 559 aa20.27■□□□□ 0.84
HMGN1-219ENST00000491183 UHRF1Q96T88 793 aaPredicted RBP20.27■□□□□ 0.84
HMGN1-219ENST00000491183 RGS18Q9NS28 235 aa20.27■□□□□ 0.84
HMGN1-219ENST00000491183 AKT3Q9Y243 479 aa20.27■□□□□ 0.84
HMGN1-219ENST00000491183 MRPL42Q9Y6G3 142 aaKnown RBP20.27■□□□□ 0.84
HMGN1-219ENST00000491183 ATG2AQ2TAZ0 1938 aa20.26■□□□□ 0.83
HMGN1-219ENST00000491183 C9IYK1 514 aa20.26■□□□□ 0.83
HMGN1-219ENST00000491183 GRM6O15303 877 aa20.26■□□□□ 0.83
HMGN1-219ENST00000491183 EIF5BO60841 1220 aaKnown RBP20.26■□□□□ 0.83
HMGN1-219ENST00000491183 TMOD1P28289 359 aa20.26■□□□□ 0.83
HMGN1-219ENST00000491183 ST3GAL1Q11201 340 aa20.26■□□□□ 0.83
HMGN1-219ENST00000491183 NR5A1Q13285 461 aa20.26■□□□□ 0.83
HMGN1-219ENST00000491183 DSC3Q14574 896 aa20.26■□□□□ 0.83
HMGN1-219ENST00000491183 XKR3Q5GH77 459 aa20.26■□□□□ 0.83
HMGN1-219ENST00000491183 ODR4Q5SWX8 454 aa20.26■□□□□ 0.83
HMGN1-219ENST00000491183 BANK1Q8NDB2 785 aa20.26■□□□□ 0.83
HMGN1-219ENST00000491183 HAS1Q92839 578 aa20.26■□□□□ 0.83
HMGN1-219ENST00000491183 TNFRSF25Q93038 417 aa20.26■□□□□ 0.83
HMGN1-219ENST00000491183 ZNF668Q96K58 619 aaPredicted RBP20.26■□□□□ 0.83
HMGN1-219ENST00000491183 FAM20AQ96MK3 541 aa20.26■□□□□ 0.83
HMGN1-219ENST00000491183 SH2D3AQ9BRG2 576 aa20.26■□□□□ 0.83
HMGN1-219ENST00000491183 VAV3Q9UKW4 847 aa20.26■□□□□ 0.83
HMGN1-219ENST00000491183 RWDD3Q9Y3V2 267 aa20.26■□□□□ 0.83
HMGN1-219ENST00000491183 KIAA1671Q9BY89 1806 aa20.25■□□□□ 0.83
HMGN1-219ENST00000491183 BRWD1Q9NSI6 2320 aa20.25■□□□□ 0.83
HMGN1-219ENST00000491183 CCNT1O60563 726 aaKnown RBP20.25■□□□□ 0.83
HMGN1-219ENST00000491183 JAK2O60674 1132 aa20.25■□□□□ 0.83
HMGN1-219ENST00000491183 GCFC2P16383 781 aaKnown RBP20.25■□□□□ 0.83
HMGN1-219ENST00000491183 IBSPP21815 317 aaPredicted RBP20.25■□□□□ 0.83
HMGN1-219ENST00000491183 FAM189BP81408 668 aa20.25■□□□□ 0.83
HMGN1-219ENST00000491183 PPP2R5CQ13362 524 aa20.25■□□□□ 0.83
HMGN1-219ENST00000491183 DRP2Q13474 957 aa20.25■□□□□ 0.83
HMGN1-219ENST00000491183 MTERF2Q49AM1 385 aa20.25■□□□□ 0.83
HMGN1-219ENST00000491183 PAN2Q504Q3 1202 aaKnown RBP20.25■□□□□ 0.83
HMGN1-219ENST00000491183 SLC24A5Q71RS6 500 aa20.25■□□□□ 0.83
HMGN1-219ENST00000491183 MAP7D2Q96T17 732 aa20.25■□□□□ 0.83
HMGN1-219ENST00000491183 UBE2ZQ9H832 354 aaPredicted RBP20.25■□□□□ 0.83
HMGN1-219ENST00000491183 C1orf112Q9NSG2 853 aa20.25■□□□□ 0.83
HMGN1-219ENST00000491183 SEPT9Q9UHD8 586 aaPredicted RBP20.25■□□□□ 0.83
HMGN1-219ENST00000491183 LRFN2Q9ULH4 789 aa20.25■□□□□ 0.83
HMGN1-219ENST00000491183 PCDHB7Q9Y5E2 793 aa20.25■□□□□ 0.83
HMGN1-219ENST00000491183 MYO7AQ13402 2215 aa20.25■□□□□ 0.83
HMGN1-219ENST00000491183 DENND3A2RUS2 1198 aa20.24■□□□□ 0.83
HMGN1-219ENST00000491183 DDX11L8A8MPP1 907 aa20.24■□□□□ 0.83
HMGN1-219ENST00000491183 EIF4BP23588 611 aaKnown RBP20.24■□□□□ 0.83
HMGN1-219ENST00000491183 GPC3P51654 580 aa20.24■□□□□ 0.83
HMGN1-219ENST00000491183 TBC1D8BQ0IIM8 1120 aa20.24■□□□□ 0.83
HMGN1-219ENST00000491183 TCEAL5Q5H9L2 206 aa20.24■□□□□ 0.83
HMGN1-219ENST00000491183 ANO5Q75V66 913 aa20.24■□□□□ 0.83
HMGN1-219ENST00000491183 C11orf84Q9BUA3 381 aaPredicted RBP20.24■□□□□ 0.83
HMGN1-219ENST00000491183 FNDC1Q4ZHG4 1894 aaPredicted RBP20.24■□□□□ 0.83
HMGN1-219ENST00000491183 IGKV6-21A0A0C4DH24 114 aa20.23■□□□□ 0.83
HMGN1-219ENST00000491183 KRT2P35908 639 aa20.23■□□□□ 0.83
HMGN1-219ENST00000491183 PSMC5P62195 406 aa20.23■□□□□ 0.83
HMGN1-219ENST00000491183 TIGD5Q53EQ6 642 aa20.23■□□□□ 0.83
HMGN1-219ENST00000491183 FAM102BQ5T8I3 360 aa20.23■□□□□ 0.83
HMGN1-219ENST00000491183 ZNF710Q8N1W2 664 aa20.23■□□□□ 0.83
HMGN1-219ENST00000491183 PLVAPQ9BX97 442 aa20.23■□□□□ 0.83
HMGN1-219ENST00000491183 LMAN2LQ9H0V9 348 aa20.23■□□□□ 0.83
HMGN1-219ENST00000491183 NSUN3Q9H649 340 aaKnown RBP20.23■□□□□ 0.83
HMGN1-219ENST00000491183 ALG13Q9NP73 1137 aaKnown RBP20.23■□□□□ 0.83
HMGN1-219ENST00000491183 PLAGL2Q9UPG8 496 aa20.23■□□□□ 0.83
HMGN1-219ENST00000491183 TBX3O15119 743 aa20.22■□□□□ 0.83
HMGN1-219ENST00000491183 CAMK1Q14012 370 aa20.22■□□□□ 0.83
HMGN1-219ENST00000491183 POTEDQ86YR6 584 aa20.22■□□□□ 0.83
HMGN1-219ENST00000491183 P2RX5Q93086 422 aa20.22■□□□□ 0.83
HMGN1-219ENST00000491183 NAP1L4Q99733 375 aaKnown RBP20.22■□□□□ 0.83
HMGN1-219ENST00000491183 WRAP73Q9P2S5 460 aaPredicted RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms