RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 CATSPER3Q86XQ3 398 aa25.12■■□□□ 1.61
USF3-203ENST00000491165 RAET1EQ8TD07 263 aa25.12■■□□□ 1.61
USF3-203ENST00000491165 MTRQ99707 1265 aa25.12■■□□□ 1.61
USF3-203ENST00000491165 EIF2AK1Q9BQI3 630 aaKnown RBP25.12■■□□□ 1.61
USF3-203ENST00000491165 POTEB3A0JP26 581 aa25.12■■□□□ 1.61
USF3-203ENST00000491165 TXLNAP40222 546 aa25.12■■□□□ 1.61
USF3-203ENST00000491165 NAALADL2Q58DX5 795 aa25.12■■□□□ 1.61
USF3-203ENST00000491165 ZNF658Q5TYW1 1059 aaPredicted RBP25.12■■□□□ 1.61
USF3-203ENST00000491165 KCNV1Q6PIU1 500 aa25.12■■□□□ 1.61
USF3-203ENST00000491165 POTEBQ6S5H4 581 aa25.12■■□□□ 1.61
USF3-203ENST00000491165 KCNK18Q7Z418 384 aa25.12■■□□□ 1.61
USF3-203ENST00000491165 TMTC1Q8IUR5 882 aa25.12■■□□□ 1.61
USF3-203ENST00000491165 HSD17B14Q9BPX1 270 aa25.12■■□□□ 1.61
USF3-203ENST00000491165 PARD6BQ9BYG5 372 aa25.12■■□□□ 1.61
USF3-203ENST00000491165 DISC1Q9NRI5 854 aa25.12■■□□□ 1.61
USF3-203ENST00000491165 PTCH2Q9Y6C5 1203 aa25.12■■□□□ 1.61
USF3-203ENST00000491165 ACTR2P61160 394 aa25.11■■□□□ 1.61
USF3-203ENST00000491165 IRX5P78411 483 aaPredicted RBP25.11■■□□□ 1.61
USF3-203ENST00000491165 ARHGAP1Q07960 439 aa25.11■■□□□ 1.61
USF3-203ENST00000491165 TRIM14Q14142 442 aa25.11■■□□□ 1.61
USF3-203ENST00000491165 NEDD9Q14511 834 aa25.11■■□□□ 1.61
USF3-203ENST00000491165 METTL7BQ6UX53 244 aa25.11■■□□□ 1.61
USF3-203ENST00000491165 MIER3Q7Z3K6 550 aa25.11■■□□□ 1.61
USF3-203ENST00000491165 ARFGAP3Q9NP61 516 aa25.11■■□□□ 1.61
USF3-203ENST00000491165 SAMM50Q9Y512 469 aa25.11■■□□□ 1.61
USF3-203ENST00000491165 SLITRK3O94933 977 aa25.1■■□□□ 1.61
USF3-203ENST00000491165 HSPA8P11142 646 aaKnown RBP25.1■■□□□ 1.61
USF3-203ENST00000491165 COPB1P53618 953 aaKnown RBP25.1■■□□□ 1.61
USF3-203ENST00000491165 KRT76Q01546 638 aa25.1■■□□□ 1.61
USF3-203ENST00000491165 CTTNQ14247 550 aaKnown RBP25.1■■□□□ 1.61
USF3-203ENST00000491165 TAF3Q5VWG9 929 aa25.1■■□□□ 1.61
USF3-203ENST00000491165 KRT79Q5XKE5 535 aa25.1■■□□□ 1.61
USF3-203ENST00000491165 ZNF746Q6NUN9 644 aaPredicted RBP25.1■■□□□ 1.61
USF3-203ENST00000491165 SRGAP1Q7Z6B7 1085 aa25.1■■□□□ 1.61
USF3-203ENST00000491165 BANK1Q8NDB2 785 aa25.1■■□□□ 1.61
USF3-203ENST00000491165 NELFBQ8WX92 580 aa25.1■■□□□ 1.61
USF3-203ENST00000491165 DYDC2Q96IM9 177 aa25.1■■□□□ 1.61
USF3-203ENST00000491165 RPN1P04843 607 aaKnown RBP25.1■■□□□ 1.61
USF3-203ENST00000491165 PLCG1P19174 1290 aa25.1■■□□□ 1.61
USF3-203ENST00000491165 CHMP4BP1P59074 171 aa25.1■■□□□ 1.61
USF3-203ENST00000491165 TUBB2AQ13885 445 aa25.1■■□□□ 1.61
USF3-203ENST00000491165 UGCGQ16739 394 aa25.1■■□□□ 1.61
USF3-203ENST00000491165 DUSP28Q4G0W2 176 aa25.1■■□□□ 1.61
USF3-203ENST00000491165 TCP11X2Q5H9J9 407 aa25.1■■□□□ 1.61
USF3-203ENST00000491165 POTEGQ6S5H5 508 aa25.1■■□□□ 1.61
USF3-203ENST00000491165 TUBB2BQ9BVA1 445 aa25.1■■□□□ 1.61
USF3-203ENST00000491165 MLXIPQ9HAP2 919 aa25.1■■□□□ 1.61
USF3-203ENST00000491165 ABHD10Q9NUJ1 306 aa25.1■■□□□ 1.61
USF3-203ENST00000491165 GNEQ9Y223 722 aaKnown RBP25.1■■□□□ 1.61
USF3-203ENST00000491165 A0A0U1RQJ8 604 aa25.09■■□□□ 1.61
USF3-203ENST00000491165 KCNJ18B7U540 433 aa25.09■■□□□ 1.61
USF3-203ENST00000491165 HSPA1AP0DMV8 641 aaKnown RBP25.09■■□□□ 1.61
USF3-203ENST00000491165 HSPA1BP0DMV9 641 aaKnown RBP25.09■■□□□ 1.61
USF3-203ENST00000491165 KCNJ12Q14500 433 aa25.09■■□□□ 1.61
USF3-203ENST00000491165 ZNF569Q5MCW4 686 aa25.09■■□□□ 1.61
USF3-203ENST00000491165 CEP112Q8N8E3 955 aa25.09■■□□□ 1.61
USF3-203ENST00000491165 ATRIPQ8WXE1 791 aa25.09■■□□□ 1.61
USF3-203ENST00000491165 VPS16Q9H269 839 aa25.09■■□□□ 1.61
USF3-203ENST00000491165 CDC23Q9UJX2 597 aa25.09■■□□□ 1.61
USF3-203ENST00000491165 MYH9P35579 1960 aaKnown RBP25.09■■□□□ 1.61
USF3-203ENST00000491165 GSTTP1A0A1W2PQM5 241 aa25.09■■□□□ 1.61
USF3-203ENST00000491165 ZBTB39O15060 712 aa25.09■■□□□ 1.61
USF3-203ENST00000491165 PRKAR2AP13861 404 aaKnown RBP25.09■■□□□ 1.61
USF3-203ENST00000491165 RPA1P27694 616 aa25.09■■□□□ 1.61
USF3-203ENST00000491165 TNFAIP2Q03169 654 aa25.09■■□□□ 1.61
USF3-203ENST00000491165 EPHA7Q15375 998 aa25.09■■□□□ 1.61
USF3-203ENST00000491165 MFSD14CQ5VZR4 134 aa25.09■■□□□ 1.61
USF3-203ENST00000491165 ABHD15Q6UXT9 468 aa25.09■■□□□ 1.61
USF3-203ENST00000491165 CCDC60Q8IWA6 550 aaPredicted RBP25.09■■□□□ 1.61
USF3-203ENST00000491165 DHX37Q8IY37 1157 aaKnown RBP25.09■■□□□ 1.61
USF3-203ENST00000491165 WDR64B1ANS9 1081 aa25.08■■□□□ 1.61
USF3-203ENST00000491165 SASH3O75995 380 aa25.08■■□□□ 1.61
USF3-203ENST00000491165 CCND3P30281 292 aaPredicted RBP25.08■■□□□ 1.61
USF3-203ENST00000491165 PSMC6P62333 389 aa25.08■■□□□ 1.61
USF3-203ENST00000491165 IQSEC1Q6DN90 963 aa25.08■■□□□ 1.61
USF3-203ENST00000491165 TAB2Q9NYJ8 693 aa25.08■■□□□ 1.61
USF3-203ENST00000491165 ATG7O95352 703 aa25.07■■□□□ 1.6
USF3-203ENST00000491165 STAT6P42226 847 aa25.07■■□□□ 1.6
USF3-203ENST00000491165 LBX1P52954 281 aa25.07■■□□□ 1.6
USF3-203ENST00000491165 HYIQ5T013 277 aa25.07■■□□□ 1.6
USF3-203ENST00000491165 CYP26C1Q6V0L0 522 aa25.07■■□□□ 1.6
USF3-203ENST00000491165 GIMAP8Q8ND71 665 aaPredicted RBP25.07■■□□□ 1.6
USF3-203ENST00000491165 PXYLP1Q8TE99 480 aa25.07■■□□□ 1.6
USF3-203ENST00000491165 SPATA33Q96N06 139 aa25.07■■□□□ 1.6
USF3-203ENST00000491165 GPR20Q99678 358 aa25.07■■□□□ 1.6
USF3-203ENST00000491165 LXNQ9BS40 222 aa25.07■■□□□ 1.6
USF3-203ENST00000491165 UBXN6Q9BZV1 441 aa25.07■■□□□ 1.6
USF3-203ENST00000491165 KIAA1024Q9UPX6 916 aa25.07■■□□□ 1.6
USF3-203ENST00000491165 PCDHA10Q9Y5I2 948 aa25.07■■□□□ 1.6
USF3-203ENST00000491165 CCDC66A2RUB6 948 aa25.07■■□□□ 1.6
USF3-203ENST00000491165 CTAGE9A4FU28 777 aa25.07■■□□□ 1.6
USF3-203ENST00000491165 HMGCRP04035 888 aa25.07■■□□□ 1.6
USF3-203ENST00000491165 TMEM119Q4V9L6 283 aa25.07■■□□□ 1.6
USF3-203ENST00000491165 MAP3K21Q5TCX8 1036 aa25.07■■□□□ 1.6
USF3-203ENST00000491165 HAUS3Q68CZ6 603 aa25.07■■□□□ 1.6
USF3-203ENST00000491165 ACRBPQ8NEB7 543 aa25.07■■□□□ 1.6
USF3-203ENST00000491165 RASSF8Q8NHQ8 419 aa25.07■■□□□ 1.6
USF3-203ENST00000491165 PCYT2Q99447 389 aa25.07■■□□□ 1.6
USF3-203ENST00000491165 BLOC1S4Q9NUP1 217 aa25.07■■□□□ 1.6
USF3-203ENST00000491165 TPH2Q8IWU9 490 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms