RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 ECE1P42892 770 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 GMPSP49915 693 aaPredicted RBP7.98□□□□□ -1.13
NPHP3-208ENST00000490993 NEDD9Q14511 834 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 SEPT14Q6ZU15 432 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 HOOK3Q86VS8 718 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 NKX2-3Q8TAU0 364 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 DYDC1Q8WWB3 177 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 TEX13BQ9BXU2 312 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 KCNMB3Q9NPA1 279 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 ANKEF1Q9NU02 776 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 BLOC1S4Q9NUP1 217 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 AGPAT5Q9NUQ2 364 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 PLAGL2Q9UPG8 496 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 TRPC6Q9Y210 931 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 TARSL2A2RTX5 802 aaKnown RBP7.97□□□□□ -1.13
NPHP3-208ENST00000490993 ZNF233A6NK53 670 aa7.97□□□□□ -1.13
NPHP3-208ENST00000490993 PGRMC1O00264 195 aaKnown RBP7.97□□□□□ -1.13
NPHP3-208ENST00000490993 PLS3P13797 630 aa7.97□□□□□ -1.13
NPHP3-208ENST00000490993 PIK3CAP42336 1068 aa7.97□□□□□ -1.13
NPHP3-208ENST00000490993 VAMP7P51809 220 aa7.97□□□□□ -1.13
NPHP3-208ENST00000490993 GPRASP2Q96D09 838 aa7.97□□□□□ -1.13
NPHP3-208ENST00000490993 MTFR1LQ9H019 292 aa7.97□□□□□ -1.13
NPHP3-208ENST00000490993 INTS2Q9H0H0 1204 aaKnown RBP7.97□□□□□ -1.13
NPHP3-208ENST00000490993 C4BP0C0L5 1744 aa7.97□□□□□ -1.13
NPHP3-208ENST00000490993 GOLGA6CA6NDK9 693 aa7.97□□□□□ -1.13
NPHP3-208ENST00000490993 P4HA2O15460 535 aa7.97□□□□□ -1.13
NPHP3-208ENST00000490993 GOLGA6DP0CG33 693 aa7.97□□□□□ -1.13
NPHP3-208ENST00000490993 RNASE9P60153 205 aaKnown RBP7.97□□□□□ -1.13
NPHP3-208ENST00000490993 GFPT1Q06210 699 aaPredicted RBP7.97□□□□□ -1.13
NPHP3-208ENST00000490993 CXCL9Q07325 125 aa7.97□□□□□ -1.13
NPHP3-208ENST00000490993 GIT2Q14161 759 aa7.97□□□□□ -1.13
NPHP3-208ENST00000490993 NPY5RQ15761 445 aa7.97□□□□□ -1.13
NPHP3-208ENST00000490993 KCNV1Q6PIU1 500 aa7.97□□□□□ -1.13
NPHP3-208ENST00000490993 KIAA1683Q9H0B3 1180 aa7.97□□□□□ -1.13
NPHP3-208ENST00000490993 RANBP17Q9H2T7 1088 aaKnown RBP7.97□□□□□ -1.13
NPHP3-208ENST00000490993 GOLGA6AQ9NYA3 693 aa7.97□□□□□ -1.13
NPHP3-208ENST00000490993 PNMA3Q9UL41 463 aa7.97□□□□□ -1.13
NPHP3-208ENST00000490993 MYH7P12883 1935 aa7.97□□□□□ -1.13
NPHP3-208ENST00000490993 KLRC4O43908 158 aa7.97□□□□□ -1.13
NPHP3-208ENST00000490993 TMOD1P28289 359 aa7.97□□□□□ -1.13
NPHP3-208ENST00000490993 SLC18A3Q16572 532 aa7.97□□□□□ -1.13
NPHP3-208ENST00000490993 RINT1Q6NUQ1 792 aa7.97□□□□□ -1.13
NPHP3-208ENST00000490993 GSTA5Q7RTV2 222 aa7.97□□□□□ -1.13
NPHP3-208ENST00000490993 TAX1BP1Q86VP1 789 aa7.97□□□□□ -1.13
NPHP3-208ENST00000490993 DEFB129Q9H1M3 183 aa7.97□□□□□ -1.13
NPHP3-208ENST00000490993 PPP2R5CQ13362 524 aa7.97□□□□□ -1.13
NPHP3-208ENST00000490993 MTERF2Q49AM1 385 aa7.97□□□□□ -1.13
NPHP3-208ENST00000490993 PCNX4Q63HM2 1172 aa7.97□□□□□ -1.13
NPHP3-208ENST00000490993 ENOSF1Q7L5Y1 443 aa7.97□□□□□ -1.13
NPHP3-208ENST00000490993 HAUS6Q7Z4H7 955 aa7.97□□□□□ -1.13
NPHP3-208ENST00000490993 KIAA0895Q8NCT3 520 aa7.97□□□□□ -1.13
NPHP3-208ENST00000490993 UBLCP1Q8WVY7 318 aaPredicted RBP7.97□□□□□ -1.13
NPHP3-208ENST00000490993 OLFML3Q9NRN5 406 aa7.97□□□□□ -1.13
NPHP3-208ENST00000490993 KCNH7Q9NS40 1196 aa7.97□□□□□ -1.13
NPHP3-208ENST00000490993 SLC9A2Q9UBY0 812 aa7.97□□□□□ -1.13
NPHP3-208ENST00000490993 CCDC188H7C350 402 aa7.96□□□□□ -1.13
NPHP3-208ENST00000490993 MYBP10242 640 aa7.96□□□□□ -1.13
NPHP3-208ENST00000490993 NMT1P30419 496 aaKnown RBP7.96□□□□□ -1.13
NPHP3-208ENST00000490993 SOX5P35711 763 aa7.96□□□□□ -1.13
NPHP3-208ENST00000490993 ERVK-24P63145 666 aa7.96□□□□□ -1.13
NPHP3-208ENST00000490993 MYBPC2Q14324 1141 aa7.96□□□□□ -1.13
NPHP3-208ENST00000490993 HYIQ5T013 277 aa7.96□□□□□ -1.13
NPHP3-208ENST00000490993 CC2D1AQ6P1N0 951 aaPredicted RBP7.96□□□□□ -1.13
NPHP3-208ENST00000490993 CHST13Q8NET6 341 aa7.96□□□□□ -1.13
NPHP3-208ENST00000490993 GRK7Q8WTQ7 553 aa7.96□□□□□ -1.13
NPHP3-208ENST00000490993 DUSP9Q99956 384 aaKnown RBP7.96□□□□□ -1.13
NPHP3-208ENST00000490993 STK33Q9BYT3 514 aa7.96□□□□□ -1.13
NPHP3-208ENST00000490993 C17orf75Q9HAS0 396 aa7.96□□□□□ -1.13
NPHP3-208ENST00000490993 PLCB1Q9NQ66 1216 aa7.96□□□□□ -1.13
NPHP3-208ENST00000490993 ZNF302Q9NR11 478 aa7.96□□□□□ -1.13
NPHP3-208ENST00000490993 FAM114A2Q9NRY5 505 aa7.96□□□□□ -1.13
NPHP3-208ENST00000490993 GABBR1Q9UBS5 961 aa7.96□□□□□ -1.13
NPHP3-208ENST00000490993 HACL1Q9UJ83 578 aa7.96□□□□□ -1.13
NPHP3-208ENST00000490993 DGAT1O75907 488 aa7.96□□□□□ -1.14
NPHP3-208ENST00000490993 MAPTP10636 758 aaKnown RBP7.96□□□□□ -1.14
NPHP3-208ENST00000490993 ATP5DP30049 168 aa7.96□□□□□ -1.14
NPHP3-208ENST00000490993 MAN1A1P33908 653 aa7.96□□□□□ -1.14
NPHP3-208ENST00000490993 NSFP46459 744 aaKnown RBP7.96□□□□□ -1.14
NPHP3-208ENST00000490993 SLC5A5Q92911 643 aa7.96□□□□□ -1.14
NPHP3-208ENST00000490993 AGBL1Q96MI9 1066 aa7.96□□□□□ -1.14
NPHP3-208ENST00000490993 CCDC113Q9H0I3 377 aa7.96□□□□□ -1.14
NPHP3-208ENST00000490993 UNC45AQ9H3U1 944 aa7.96□□□□□ -1.14
NPHP3-208ENST00000490993 JPH1Q9HDC5 661 aaPredicted RBP7.96□□□□□ -1.14
NPHP3-208ENST00000490993 LCMT1Q9UIC8 334 aa7.96□□□□□ -1.14
NPHP3-208ENST00000490993 SLC16A4O15374 487 aa7.96□□□□□ -1.14
NPHP3-208ENST00000490993 PALMO75781 387 aa7.96□□□□□ -1.14
NPHP3-208ENST00000490993 PNMA6AP0CW24 399 aaPredicted RBP7.96□□□□□ -1.14
NPHP3-208ENST00000490993 HMGCS2P54868 508 aa7.96□□□□□ -1.14
NPHP3-208ENST00000490993 ZNF746Q6NUN9 644 aaPredicted RBP7.96□□□□□ -1.14
NPHP3-208ENST00000490993 MORC4Q8TE76 937 aa7.96□□□□□ -1.14
NPHP3-208ENST00000490993 MTRQ99707 1265 aa7.96□□□□□ -1.14
NPHP3-208ENST00000490993 MOV10L1Q9BXT6 1211 aaKnown RBP7.96□□□□□ -1.14
NPHP3-208ENST00000490993 MIS12Q9H081 205 aa7.96□□□□□ -1.14
NPHP3-208ENST00000490993 TCHHQ07283 1943 aa7.96□□□□□ -1.14
NPHP3-208ENST00000490993 PFASO15067 1338 aa7.96□□□□□ -1.14
NPHP3-208ENST00000490993 MIF4GDA9UHW6 222 aaKnown RBP7.96□□□□□ -1.14
NPHP3-208ENST00000490993 K7ERI5 159 aa7.96□□□□□ -1.14
NPHP3-208ENST00000490993 NR3C2P08235 984 aa7.96□□□□□ -1.14
NPHP3-208ENST00000490993 OSBPL9Q96SU4 736 aa7.96□□□□□ -1.14
NPHP3-208ENST00000490993 PPP1R9AQ9ULJ8 1098 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms