RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 KIZQ2M2Z5 673 aa17.08■□□□□ 0.32
COL27A1-206ENST00000490831 ODR4Q5SWX8 454 aa17.08■□□□□ 0.32
COL27A1-206ENST00000490831 ANO5Q75V66 913 aa17.08■□□□□ 0.32
COL27A1-206ENST00000490831 C4orf19Q8IY42 314 aa17.08■□□□□ 0.32
COL27A1-206ENST00000490831 MAP7D2Q96T17 732 aa17.08■□□□□ 0.32
COL27A1-206ENST00000490831 TMX1Q9H3N1 280 aa17.08■□□□□ 0.32
COL27A1-206ENST00000490831 WRAP73Q9P2S5 460 aaPredicted RBP17.08■□□□□ 0.32
COL27A1-206ENST00000490831 SEPT9Q9UHD8 586 aaPredicted RBP17.08■□□□□ 0.32
COL27A1-206ENST00000490831 NOC2LQ9Y3T9 749 aaKnown RBP17.08■□□□□ 0.32
COL27A1-206ENST00000490831 PPME1Q9Y570 386 aa17.08■□□□□ 0.32
COL27A1-206ENST00000490831 MARCH6O60337 910 aa17.07■□□□□ 0.32
COL27A1-206ENST00000490831 LPXNO60711 386 aa17.07■□□□□ 0.32
COL27A1-206ENST00000490831 RPS6KA5O75582 802 aa17.07■□□□□ 0.32
COL27A1-206ENST00000490831 MCM2P49736 904 aa17.07■□□□□ 0.32
COL27A1-206ENST00000490831 ORC2Q13416 577 aaPredicted RBP17.07■□□□□ 0.32
COL27A1-206ENST00000490831 LRRC71Q8N4P6 559 aa17.07■□□□□ 0.32
COL27A1-206ENST00000490831 FAM184AQ8NB25 1140 aa17.07■□□□□ 0.32
COL27A1-206ENST00000490831 ARNTL2Q8WYA1 636 aa17.07■□□□□ 0.32
COL27A1-206ENST00000490831 TMX3Q96JJ7 454 aa17.07■□□□□ 0.32
COL27A1-206ENST00000490831 YME1L1Q96TA2 773 aa17.07■□□□□ 0.32
COL27A1-206ENST00000490831 CERS4Q9HA82 394 aa17.07■□□□□ 0.32
COL27A1-206ENST00000490831 PCDHA12Q9UN75 941 aa17.07■□□□□ 0.32
COL27A1-206ENST00000490831 TMEM150BA6NC51 233 aa17.06■□□□□ 0.32
COL27A1-206ENST00000490831 DDX11L8A8MPP1 907 aa17.06■□□□□ 0.32
COL27A1-206ENST00000490831 RFXAPO00287 272 aa17.06■□□□□ 0.32
COL27A1-206ENST00000490831 GPR182O15218 404 aa17.06■□□□□ 0.32
COL27A1-206ENST00000490831 MAFO75444 373 aaPredicted RBP17.06■□□□□ 0.32
COL27A1-206ENST00000490831 UPP2O95045 317 aa17.06■□□□□ 0.32
COL27A1-206ENST00000490831 IGFBP4P22692 258 aa17.06■□□□□ 0.32
COL27A1-206ENST00000490831 U2AF2P26368 475 aaKnown RBP eCLIP17.06■□□□□ 0.32
COL27A1-206ENST00000490831 CDC42EP1Q00587 391 aa17.06■□□□□ 0.32
COL27A1-206ENST00000490831 TMEM266Q2M3C6 531 aa17.06■□□□□ 0.32
COL27A1-206ENST00000490831 MTERF2Q49AM1 385 aa17.06■□□□□ 0.32
COL27A1-206ENST00000490831 FAM228AQ86W67 206 aa17.06■□□□□ 0.32
COL27A1-206ENST00000490831 NOSTRINQ8IVI9 506 aa17.06■□□□□ 0.32
COL27A1-206ENST00000490831 ZNF689Q96CS4 500 aaPredicted RBP17.06■□□□□ 0.32
COL27A1-206ENST00000490831 SAMD11Q96NU1 681 aa17.06■□□□□ 0.32
COL27A1-206ENST00000490831 OSMRQ99650 979 aa17.06■□□□□ 0.32
COL27A1-206ENST00000490831 LXNQ9BS40 222 aa17.06■□□□□ 0.32
COL27A1-206ENST00000490831 CYP26B1Q9NR63 512 aa17.06■□□□□ 0.32
COL27A1-206ENST00000490831 ST3GAL5Q9UNP4 418 aa17.06■□□□□ 0.32
COL27A1-206ENST00000490831 AKT3Q9Y243 479 aa17.06■□□□□ 0.32
COL27A1-206ENST00000490831 GINS2Q9Y248 185 aa17.06■□□□□ 0.32
COL27A1-206ENST00000490831 MTCH2Q9Y6C9 303 aa17.06■□□□□ 0.32
COL27A1-206ENST00000490831 DGKIO75912 1065 aa17.05■□□□□ 0.32
COL27A1-206ENST00000490831 LYPLA2O95372 231 aa17.05■□□□□ 0.32
COL27A1-206ENST00000490831 TRAPPC10P48553 1259 aa17.05■□□□□ 0.32
COL27A1-206ENST00000490831 GPC3P51654 580 aa17.05■□□□□ 0.32
COL27A1-206ENST00000490831 NLRP11P59045 1033 aaKnown RBP17.05■□□□□ 0.32
COL27A1-206ENST00000490831 GRB10Q13322 594 aa17.05■□□□□ 0.32
COL27A1-206ENST00000490831 NCAPH2Q6IBW4 605 aa17.05■□□□□ 0.32
COL27A1-206ENST00000490831 NPAS4Q8IUM7 802 aa17.05■□□□□ 0.32
COL27A1-206ENST00000490831 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.05■□□□□ 0.32
COL27A1-206ENST00000490831 HSD17B14Q9BPX1 270 aa17.05■□□□□ 0.32
COL27A1-206ENST00000490831 JPH2Q9BR39 696 aaPredicted RBP17.05■□□□□ 0.32
COL27A1-206ENST00000490831 TMEM60Q9H2L4 133 aa17.05■□□□□ 0.32
COL27A1-206ENST00000490831 ZSWIM4Q9H7M6 989 aa17.05■□□□□ 0.32
COL27A1-206ENST00000490831 TTC12Q9H892 705 aaPredicted RBP17.05■□□□□ 0.32
COL27A1-206ENST00000490831 SUGCTQ9HAC7 445 aa17.05■□□□□ 0.32
COL27A1-206ENST00000490831 RGL1Q9NZL6 768 aa17.05■□□□□ 0.32
COL27A1-206ENST00000490831 LMCD1Q9NZU5 365 aa17.05■□□□□ 0.32
COL27A1-206ENST00000490831 KIF3AQ9Y496 699 aa17.05■□□□□ 0.32
COL27A1-206ENST00000490831 PRRC2BQ5JSZ5 2229 aaKnown RBP17.05■□□□□ 0.32
COL27A1-206ENST00000490831 MGEA5O60502 916 aa17.04■□□□□ 0.32
COL27A1-206ENST00000490831 SLITRK3O94933 977 aa17.04■□□□□ 0.32
COL27A1-206ENST00000490831 LINC00271P0C7V0 271 aa17.04■□□□□ 0.32
COL27A1-206ENST00000490831 EIF4BP23588 611 aaKnown RBP17.04■□□□□ 0.32
COL27A1-206ENST00000490831 NFX1Q12986 1120 aaKnown RBP17.04■□□□□ 0.32
COL27A1-206ENST00000490831 DRP2Q13474 957 aa17.04■□□□□ 0.32
COL27A1-206ENST00000490831 DSC3Q14574 896 aa17.04■□□□□ 0.32
COL27A1-206ENST00000490831 PLA2G4FQ68DD2 849 aa17.04■□□□□ 0.32
COL27A1-206ENST00000490831 EXOC8Q8IYI6 725 aa17.04■□□□□ 0.32
COL27A1-206ENST00000490831 NEK9Q8TD19 979 aa17.04■□□□□ 0.32
COL27A1-206ENST00000490831 DYDC2Q96IM9 177 aa17.04■□□□□ 0.32
COL27A1-206ENST00000490831 PPP1R16BQ96T49 567 aa17.04■□□□□ 0.32
COL27A1-206ENST00000490831 EIF2AK1Q9BQI3 630 aaKnown RBP17.04■□□□□ 0.32
COL27A1-206ENST00000490831 SH2D3AQ9BRG2 576 aa17.04■□□□□ 0.32
COL27A1-206ENST00000490831 C17orf80Q9BSJ5 609 aa17.04■□□□□ 0.32
COL27A1-206ENST00000490831 BACH2Q9BYV9 841 aa17.04■□□□□ 0.32
COL27A1-206ENST00000490831 DHX33Q9H6R0 707 aaKnown RBP17.04■□□□□ 0.32
COL27A1-206ENST00000490831 RGS18Q9NS28 235 aa17.04■□□□□ 0.32
COL27A1-206ENST00000490831 C1orf112Q9NSG2 853 aa17.04■□□□□ 0.32
COL27A1-206ENST00000490831 COL4A4P53420 1690 aaPredicted RBP17.04■□□□□ 0.32
COL27A1-206ENST00000490831 ADGRA3Q8IWK6 1321 aa17.03■□□□□ 0.32
COL27A1-206ENST00000490831 C9IYK1 514 aa17.03■□□□□ 0.32
COL27A1-206ENST00000490831 GTPBP6O43824 516 aaPredicted RBP17.03■□□□□ 0.32
COL27A1-206ENST00000490831 STAG3L1P0CL83 205 aa17.03■□□□□ 0.32
COL27A1-206ENST00000490831 DARSP14868 501 aaKnown RBP17.03■□□□□ 0.32
COL27A1-206ENST00000490831 YWHABP31946 246 aaKnown RBP17.03■□□□□ 0.32
COL27A1-206ENST00000490831 MCM7P33993 719 aa17.03■□□□□ 0.32
COL27A1-206ENST00000490831 TXKP42681 527 aa17.03■□□□□ 0.32
COL27A1-206ENST00000490831 SARSP49591 514 aaKnown RBP17.03■□□□□ 0.32
COL27A1-206ENST00000490831 DNM2P50570 870 aa17.03■□□□□ 0.32
COL27A1-206ENST00000490831 NPEPPSP55786 919 aa17.03■□□□□ 0.32
COL27A1-206ENST00000490831 FAM189BP81408 668 aa17.03■□□□□ 0.32
COL27A1-206ENST00000490831 OTUD6AQ7L8S5 288 aa17.03■□□□□ 0.32
COL27A1-206ENST00000490831 CLP1Q92989 425 aaKnown RBP17.03■□□□□ 0.32
COL27A1-206ENST00000490831 RFC5P40937 340 aa17.02■□□□□ 0.32
COL27A1-206ENST00000490831 CTTNQ14247 550 aaKnown RBP17.02■□□□□ 0.32
COL27A1-206ENST00000490831 EPC2Q52LR7 807 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms