RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 JAK2O60674 1132 aa11.66□□□□□ -0.54
RBM39-236ENST00000490484 GPR32O75388 356 aa11.66□□□□□ -0.54
RBM39-236ENST00000490484 DGKIO75912 1065 aa11.66□□□□□ -0.54
RBM39-236ENST00000490484 LINC00271P0C7V0 271 aa11.66□□□□□ -0.54
RBM39-236ENST00000490484 FDPSP14324 419 aaKnown RBP11.66□□□□□ -0.54
RBM39-236ENST00000490484 KRT2P35908 639 aa11.66□□□□□ -0.54
RBM39-236ENST00000490484 GATMP50440 423 aa11.66□□□□□ -0.54
RBM39-236ENST00000490484 CRYBB1P53674 252 aaPredicted RBP11.66□□□□□ -0.54
RBM39-236ENST00000490484 TBC1D8BQ0IIM8 1120 aa11.66□□□□□ -0.54
RBM39-236ENST00000490484 GPM6BQ13491 265 aa11.66□□□□□ -0.54
RBM39-236ENST00000490484 MTERF2Q49AM1 385 aa11.66□□□□□ -0.54
RBM39-236ENST00000490484 PAN2Q504Q3 1202 aaKnown RBP11.66□□□□□ -0.54
RBM39-236ENST00000490484 EFCAB12Q6NXP0 572 aa11.66□□□□□ -0.54
RBM39-236ENST00000490484 RTN4RL1Q86UN2 441 aaPredicted RBP11.66□□□□□ -0.54
RBM39-236ENST00000490484 FAM228AQ86W67 206 aa11.66□□□□□ -0.54
RBM39-236ENST00000490484 BANK1Q8NDB2 785 aa11.66□□□□□ -0.54
RBM39-236ENST00000490484 NSUN7Q8NE18 718 aaKnown RBP11.66□□□□□ -0.54
RBM39-236ENST00000490484 ZNF689Q96CS4 500 aaPredicted RBP11.66□□□□□ -0.54
RBM39-236ENST00000490484 MRPL38Q96DV4 380 aaKnown RBP11.66□□□□□ -0.54
RBM39-236ENST00000490484 ZNF668Q96K58 619 aaPredicted RBP11.66□□□□□ -0.54
RBM39-236ENST00000490484 SCLT1Q96NL6 688 aa11.66□□□□□ -0.54
RBM39-236ENST00000490484 NECAB3Q96P71 396 aaPredicted RBP11.66□□□□□ -0.54
RBM39-236ENST00000490484 UHRF1Q96T88 793 aaPredicted RBP11.66□□□□□ -0.54
RBM39-236ENST00000490484 SH2D3AQ9BRG2 576 aa11.66□□□□□ -0.54
RBM39-236ENST00000490484 NRBP2Q9NSY0 501 aa11.66□□□□□ -0.54
RBM39-236ENST00000490484 VAV3Q9UKW4 847 aa11.66□□□□□ -0.54
RBM39-236ENST00000490484 LRFN2Q9ULH4 789 aa11.66□□□□□ -0.54
RBM39-236ENST00000490484 ST3GAL5Q9UNP4 418 aa11.66□□□□□ -0.54
RBM39-236ENST00000490484 COG5Q9UP83 839 aa11.66□□□□□ -0.54
RBM39-236ENST00000490484 BRWD1Q9NSI6 2320 aa11.66□□□□□ -0.54
RBM39-236ENST00000490484 BDP1A6H8Y1 2624 aa11.65□□□□□ -0.54
RBM39-236ENST00000490484 ATG2AQ2TAZ0 1938 aa11.65□□□□□ -0.54
RBM39-236ENST00000490484 GPR182O15218 404 aa11.65□□□□□ -0.54
RBM39-236ENST00000490484 STAG3L1P0CL83 205 aa11.65□□□□□ -0.54
RBM39-236ENST00000490484 GCFC2P16383 781 aaKnown RBP11.65□□□□□ -0.54
RBM39-236ENST00000490484 TMOD1P28289 359 aa11.65□□□□□ -0.54
RBM39-236ENST00000490484 SARSP49591 514 aaKnown RBP11.65□□□□□ -0.54
RBM39-236ENST00000490484 NLRP11P59045 1033 aaKnown RBP11.65□□□□□ -0.54
RBM39-236ENST00000490484 ST3GAL1Q11201 340 aa11.65□□□□□ -0.54
RBM39-236ENST00000490484 NR5A1Q13285 461 aa11.65□□□□□ -0.54
RBM39-236ENST00000490484 TIGD5Q53EQ6 642 aa11.65□□□□□ -0.54
RBM39-236ENST00000490484 EARS2Q5JPH6 523 aaKnown RBP11.65□□□□□ -0.54
RBM39-236ENST00000490484 B3GNT9Q6UX72 402 aa11.65□□□□□ -0.54
RBM39-236ENST00000490484 POTEDQ86YR6 584 aa11.65□□□□□ -0.54
RBM39-236ENST00000490484 CMTR2Q8IYT2 770 aaKnown RBP11.65□□□□□ -0.54
RBM39-236ENST00000490484 LINC01465Q8N7H1 131 aa11.65□□□□□ -0.54
RBM39-236ENST00000490484 ADAM2Q99965 735 aa11.65□□□□□ -0.54
RBM39-236ENST00000490484 C11orf84Q9BUA3 381 aaPredicted RBP11.65□□□□□ -0.54
RBM39-236ENST00000490484 BRMS1Q9HCU9 246 aa11.65□□□□□ -0.54
RBM39-236ENST00000490484 KCNMB3Q9NPA1 279 aa11.65□□□□□ -0.54
RBM39-236ENST00000490484 RWDD3Q9Y3V2 267 aa11.65□□□□□ -0.54
RBM39-236ENST00000490484 MRPL42Q9Y6G3 142 aaKnown RBP11.65□□□□□ -0.54
RBM39-236ENST00000490484 C5orf67F2Z3F1 127 aa11.64□□□□□ -0.55
RBM39-236ENST00000490484 TNFRSF10AO00220 468 aa11.64□□□□□ -0.55
RBM39-236ENST00000490484 EML1O00423 815 aa11.64□□□□□ -0.55
RBM39-236ENST00000490484 BMPR1AP36894 532 aa11.64□□□□□ -0.55
RBM39-236ENST00000490484 PPP2R5CQ13362 524 aa11.64□□□□□ -0.55
RBM39-236ENST00000490484 DRP2Q13474 957 aa11.64□□□□□ -0.55
RBM39-236ENST00000490484 XKR3Q5GH77 459 aa11.64□□□□□ -0.55
RBM39-236ENST00000490484 ODR4Q5SWX8 454 aa11.64□□□□□ -0.55
RBM39-236ENST00000490484 PLA2G4FQ68DD2 849 aa11.64□□□□□ -0.55
RBM39-236ENST00000490484 PPP4R3AQ6IN85 833 aa11.64□□□□□ -0.55
RBM39-236ENST00000490484 CRIPAKQ8N1N5 446 aa11.64□□□□□ -0.55
RBM39-236ENST00000490484 NLRP7Q8WX94 980 aa11.64□□□□□ -0.55
RBM39-236ENST00000490484 CLP1Q92989 425 aaKnown RBP11.64□□□□□ -0.55
RBM39-236ENST00000490484 TNFRSF25Q93038 417 aa11.64□□□□□ -0.55
RBM39-236ENST00000490484 ADAMTS10Q9H324 1103 aa11.64□□□□□ -0.55
RBM39-236ENST00000490484 C1orf112Q9NSG2 853 aa11.64□□□□□ -0.55
RBM39-236ENST00000490484 PCDHB7Q9Y5E2 793 aa11.64□□□□□ -0.55
RBM39-236ENST00000490484 TCF20Q9UGU0 1960 aaKnown RBP11.64□□□□□ -0.55
RBM39-236ENST00000490484 GRM6O15303 877 aa11.63□□□□□ -0.55
RBM39-236ENST00000490484 MARCH6O60337 910 aa11.63□□□□□ -0.55
RBM39-236ENST00000490484 STBD1O95210 358 aa11.63□□□□□ -0.55
RBM39-236ENST00000490484 MMP1P03956 469 aa11.63□□□□□ -0.55
RBM39-236ENST00000490484 BMP1P13497 986 aa11.63□□□□□ -0.55
RBM39-236ENST00000490484 KCNA5P22460 613 aa11.63□□□□□ -0.55
RBM39-236ENST00000490484 EIF4BP23588 611 aaKnown RBP11.63□□□□□ -0.55
RBM39-236ENST00000490484 GPC3P51654 580 aa11.63□□□□□ -0.55
RBM39-236ENST00000490484 PSMC5P62195 406 aa11.63□□□□□ -0.55
RBM39-236ENST00000490484 TRIM29Q14134 588 aa11.63□□□□□ -0.55
RBM39-236ENST00000490484 TARBP2Q15633 366 aaKnown RBP11.63□□□□□ -0.55
RBM39-236ENST00000490484 TCEAL5Q5H9L2 206 aa11.63□□□□□ -0.55
RBM39-236ENST00000490484 SLC24A5Q71RS6 500 aa11.63□□□□□ -0.55
RBM39-236ENST00000490484 HAS1Q92839 578 aa11.63□□□□□ -0.55
RBM39-236ENST00000490484 FAM20AQ96MK3 541 aa11.63□□□□□ -0.55
RBM39-236ENST00000490484 NAP1L4Q99733 375 aaKnown RBP11.63□□□□□ -0.55
RBM39-236ENST00000490484 NIFKQ9BYG3 293 aaKnown RBP11.63□□□□□ -0.55
RBM39-236ENST00000490484 NSUN3Q9H649 340 aaKnown RBP11.63□□□□□ -0.55
RBM39-236ENST00000490484 UBE2ZQ9H832 354 aaPredicted RBP11.63□□□□□ -0.55
RBM39-236ENST00000490484 RGS18Q9NS28 235 aa11.63□□□□□ -0.55
RBM39-236ENST00000490484 NCOR1O75376 2440 aa11.62□□□□□ -0.55
RBM39-236ENST00000490484 TBKBP1A7MCY6 615 aa11.62□□□□□ -0.55
RBM39-236ENST00000490484 DDX11L8A8MPP1 907 aa11.62□□□□□ -0.55
RBM39-236ENST00000490484 BTBD18B2RXH4 712 aa11.62□□□□□ -0.55
RBM39-236ENST00000490484 C9IYK1 514 aa11.62□□□□□ -0.55
RBM39-236ENST00000490484 TBX3O15119 743 aa11.62□□□□□ -0.55
RBM39-236ENST00000490484 RB1P06400 928 aa11.62□□□□□ -0.55
RBM39-236ENST00000490484 FGFR1P11362 822 aa11.62□□□□□ -0.55
RBM39-236ENST00000490484 FGFR4P22455 802 aa11.62□□□□□ -0.55
RBM39-236ENST00000490484 QARSP47897 775 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms