RNA–Protein interactions for RNA: ENST00000490471.1

CDCP1-203, Transcript of CUB domain containing protein 1, humanhuman

TSL 4

Gene CDCP1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-203ENST00000490471 TELO2Q9Y4R8 837 aa12.81□□□□□ -0.36
CDCP1-203ENST00000490471 NLRC5Q86WI3 1866 aa12.8□□□□□ -0.36
CDCP1-203ENST00000490471 MYH9P35579 1960 aaKnown RBP12.8□□□□□ -0.36
CDCP1-203ENST00000490471 IGLV3-22A0A075B6J6 115 aa12.8□□□□□ -0.36
CDCP1-203ENST00000490471 MMP1P03956 469 aa12.8□□□□□ -0.36
CDCP1-203ENST00000490471 CCT2P78371 535 aaKnown RBP12.8□□□□□ -0.36
CDCP1-203ENST00000490471 LRCH2Q5VUJ6 765 aa12.8□□□□□ -0.36
CDCP1-203ENST00000490471 EFCAB12Q6NXP0 572 aa12.8□□□□□ -0.36
CDCP1-203ENST00000490471 CCDC60Q8IWA6 550 aaPredicted RBP12.8□□□□□ -0.36
CDCP1-203ENST00000490471 GJD3Q8N144 294 aa12.8□□□□□ -0.36
CDCP1-203ENST00000490471 MICAL1Q8TDZ2 1067 aa12.8□□□□□ -0.36
CDCP1-203ENST00000490471 TRAPPC12Q8WVT3 735 aa12.8□□□□□ -0.36
CDCP1-203ENST00000490471 PHKBQ93100 1093 aa12.8□□□□□ -0.36
CDCP1-203ENST00000490471 ADAM2Q99965 735 aa12.8□□□□□ -0.36
CDCP1-203ENST00000490471 AGO3Q9H9G7 860 aaKnown RBP12.8□□□□□ -0.36
CDCP1-203ENST00000490471 ZSWIM6Q9HCJ5 1215 aa12.8□□□□□ -0.36
CDCP1-203ENST00000490471 DISC1Q9NRI5 854 aa12.8□□□□□ -0.36
CDCP1-203ENST00000490471 RGS18Q9NS28 235 aa12.8□□□□□ -0.36
CDCP1-203ENST00000490471 PDRG1Q9NUG6 133 aa12.8□□□□□ -0.36
CDCP1-203ENST00000490471 DACT1Q9NYF0 836 aa12.8□□□□□ -0.36
CDCP1-203ENST00000490471 AKT3Q9Y243 479 aa12.8□□□□□ -0.36
CDCP1-203ENST00000490471 GRXCR2A6NFK2 248 aa12.79□□□□□ -0.36
CDCP1-203ENST00000490471 DHX15O43143 795 aaKnown RBP12.79□□□□□ -0.36
CDCP1-203ENST00000490471 CCNE2O96020 404 aa12.79□□□□□ -0.36
CDCP1-203ENST00000490471 OATP04181 439 aa12.79□□□□□ -0.36
CDCP1-203ENST00000490471 SKIP12755 728 aa12.79□□□□□ -0.36
CDCP1-203ENST00000490471 CPA1P15085 419 aa12.79□□□□□ -0.36
CDCP1-203ENST00000490471 KRT17Q04695 432 aa12.79□□□□□ -0.36
CDCP1-203ENST00000490471 TBC1D8BQ0IIM8 1120 aa12.79□□□□□ -0.36
CDCP1-203ENST00000490471 NONOQ15233 471 aaKnown RBP eCLIP12.79□□□□□ -0.36
CDCP1-203ENST00000490471 PKN1Q16512 942 aa12.79□□□□□ -0.36
CDCP1-203ENST00000490471 MOXD1Q6UVY6 613 aa12.79□□□□□ -0.36
CDCP1-203ENST00000490471 MIER3Q7Z3K6 550 aa12.79□□□□□ -0.36
CDCP1-203ENST00000490471 KRT25Q7Z3Z0 450 aa12.79□□□□□ -0.36
CDCP1-203ENST00000490471 SPRED2Q7Z698 418 aa12.79□□□□□ -0.36
CDCP1-203ENST00000490471 FAM178BQ8IXR5 827 aa12.79□□□□□ -0.36
CDCP1-203ENST00000490471 KIAA0319LQ8IZA0 1049 aa12.79□□□□□ -0.36
CDCP1-203ENST00000490471 BLIDQ8IZY5 108 aa12.79□□□□□ -0.36
CDCP1-203ENST00000490471 NEK9Q8TD19 979 aa12.79□□□□□ -0.36
CDCP1-203ENST00000490471 CRYGNQ8WXF5 182 aa12.79□□□□□ -0.36
CDCP1-203ENST00000490471 NECAB3Q96P71 396 aaPredicted RBP12.79□□□□□ -0.36
CDCP1-203ENST00000490471 BRMS1Q9HCU9 246 aa12.79□□□□□ -0.36
CDCP1-203ENST00000490471 TMEM161AQ9NX61 479 aa12.79□□□□□ -0.36
CDCP1-203ENST00000490471 VPS54Q9P1Q0 977 aa12.79□□□□□ -0.36
CDCP1-203ENST00000490471 ST3GAL5Q9UNP4 418 aa12.79□□□□□ -0.36
CDCP1-203ENST00000490471 PLAGL2Q9UPG8 496 aa12.79□□□□□ -0.36
CDCP1-203ENST00000490471 ARIH1Q9Y4X5 557 aaPredicted RBP12.79□□□□□ -0.36
CDCP1-203ENST00000490471 TTC3P53804 2025 aa12.78□□□□□ -0.36
CDCP1-203ENST00000490471 CCDC194A0A1B0GVG4 234 aa12.78□□□□□ -0.36
CDCP1-203ENST00000490471 BAG4O95429 457 aaKnown RBP12.78□□□□□ -0.36
CDCP1-203ENST00000490471 LAG3P18627 525 aa12.78□□□□□ -0.36
CDCP1-203ENST00000490471 IBSPP21815 317 aaPredicted RBP12.78□□□□□ -0.36
CDCP1-203ENST00000490471 NDUFV1P49821 464 aa12.78□□□□□ -0.36
CDCP1-203ENST00000490471 COL9A3Q14050 684 aaPredicted RBP12.78□□□□□ -0.36
CDCP1-203ENST00000490471 NTRK3Q16288 839 aa12.78□□□□□ -0.36
CDCP1-203ENST00000490471 Q4G0T1 1027 aa12.78□□□□□ -0.36
CDCP1-203ENST00000490471 PAN2Q504Q3 1202 aaKnown RBP12.78□□□□□ -0.36
CDCP1-203ENST00000490471 XKR3Q5GH77 459 aa12.78□□□□□ -0.36
CDCP1-203ENST00000490471 TRMT1LQ7Z2T5 733 aaKnown RBP12.78□□□□□ -0.36
CDCP1-203ENST00000490471 THNSL1Q8IYQ7 743 aa12.78□□□□□ -0.36
CDCP1-203ENST00000490471 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.78□□□□□ -0.36
CDCP1-203ENST00000490471 TBCKQ8TEA7 893 aa12.78□□□□□ -0.36
CDCP1-203ENST00000490471 CDCA3Q99618 268 aaPredicted RBP12.78□□□□□ -0.36
CDCP1-203ENST00000490471 SLKQ9H2G2 1235 aaPredicted RBP12.78□□□□□ -0.36
CDCP1-203ENST00000490471 IGFLR1Q9H665 355 aa12.78□□□□□ -0.36
CDCP1-203ENST00000490471 ERVK-5Q9HDB9 667 aa12.78□□□□□ -0.36
CDCP1-203ENST00000490471 CIZ1Q9ULV3 898 aaPredicted RBP12.78□□□□□ -0.36
CDCP1-203ENST00000490471 NOC2LQ9Y3T9 749 aaKnown RBP12.78□□□□□ -0.36
CDCP1-203ENST00000490471 COL6A3P12111 3177 aa12.77□□□□□ -0.37
CDCP1-203ENST00000490471 TBKBP1A7MCY6 615 aa12.77□□□□□ -0.37
CDCP1-203ENST00000490471 PI4K2BG5E9Z4 385 aa12.77□□□□□ -0.37
CDCP1-203ENST00000490471 GRM6O15303 877 aa12.77□□□□□ -0.37
CDCP1-203ENST00000490471 GPR37L1O60883 481 aa12.77□□□□□ -0.37
CDCP1-203ENST00000490471 C22orf31O95567 290 aa12.77□□□□□ -0.37
CDCP1-203ENST00000490471 GCFC2P16383 781 aaKnown RBP12.77□□□□□ -0.37
CDCP1-203ENST00000490471 EIF4BP23588 611 aaKnown RBP12.77□□□□□ -0.37
CDCP1-203ENST00000490471 PPM1AP35813 382 aa12.77□□□□□ -0.37
CDCP1-203ENST00000490471 NLRP11P59045 1033 aaKnown RBP12.77□□□□□ -0.37
CDCP1-203ENST00000490471 KIZQ2M2Z5 673 aa12.77□□□□□ -0.37
CDCP1-203ENST00000490471 TMEM266Q2M3C6 531 aa12.77□□□□□ -0.37
CDCP1-203ENST00000490471 RTN4RL1Q86UN2 441 aaPredicted RBP12.77□□□□□ -0.37
CDCP1-203ENST00000490471 TMEM87AQ8NBN3 555 aa12.77□□□□□ -0.37
CDCP1-203ENST00000490471 DAGLBQ8NCG7 672 aa12.77□□□□□ -0.37
CDCP1-203ENST00000490471 NLRP7Q8WX94 980 aa12.77□□□□□ -0.37
CDCP1-203ENST00000490471 SLC5A5Q92911 643 aa12.77□□□□□ -0.37
CDCP1-203ENST00000490471 FAM122AQ96E09 287 aa12.77□□□□□ -0.37
CDCP1-203ENST00000490471 OSMRQ99650 979 aa12.77□□□□□ -0.37
CDCP1-203ENST00000490471 GCOM2Q9BZD3 368 aaPredicted RBP12.77□□□□□ -0.37
CDCP1-203ENST00000490471 OSBPL7Q9BZF2 842 aa12.77□□□□□ -0.37
CDCP1-203ENST00000490471 OCEL1Q9H607 264 aa12.77□□□□□ -0.37
CDCP1-203ENST00000490471 CHST12Q9NRB3 414 aa12.77□□□□□ -0.37
CDCP1-203ENST00000490471 CD207Q9UJ71 328 aa12.77□□□□□ -0.37
CDCP1-203ENST00000490471 PPME1Q9Y570 386 aa12.77□□□□□ -0.37
CDCP1-203ENST00000490471 MRPL42Q9Y6G3 142 aaKnown RBP12.77□□□□□ -0.37
CDCP1-203ENST00000490471 CYP3A7-CYP3A51PA0A087WV96 503 aa12.76□□□□□ -0.37
CDCP1-203ENST00000490471 H3BQ06 376 aaPredicted RBP12.76□□□□□ -0.37
CDCP1-203ENST00000490471 MSH4O15457 936 aa12.76□□□□□ -0.37
CDCP1-203ENST00000490471 CHMP2AO43633 222 aa12.76□□□□□ -0.37
CDCP1-203ENST00000490471 EOMESO95936 686 aa12.76□□□□□ -0.37
CDCP1-203ENST00000490471 SFPQP23246 707 aaKnown RBP eCLIP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms