RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 RIPOR3Q96MK2 946 aa9.37□□□□□ -0.91
USP39-216ENST00000490193 MXRA8Q9BRK3 442 aa9.37□□□□□ -0.91
USP39-216ENST00000490193 CWH43Q9H720 699 aa9.37□□□□□ -0.91
USP39-216ENST00000490193 ELAC1Q9H777 363 aaKnown RBP9.37□□□□□ -0.91
USP39-216ENST00000490193 KCNH7Q9NS40 1196 aa9.37□□□□□ -0.91
USP39-216ENST00000490193 FAM86C1Q9NVL1 165 aa9.37□□□□□ -0.91
USP39-216ENST00000490193 TMEM161AQ9NX61 479 aa9.37□□□□□ -0.91
USP39-216ENST00000490193 PCDHA6Q9UN73 950 aa9.37□□□□□ -0.91
USP39-216ENST00000490193 PCDHA8Q9Y5H6 950 aa9.37□□□□□ -0.91
USP39-216ENST00000490193 COL1A2P08123 1366 aa9.37□□□□□ -0.91
USP39-216ENST00000490193 WDR81Q562E7 1941 aa9.37□□□□□ -0.91
USP39-216ENST00000490193 DMDP11532 3685 aa9.36□□□□□ -0.91
USP39-216ENST00000490193 DENND4AQ7Z401 1863 aa9.36□□□□□ -0.91
USP39-216ENST00000490193 MYH9P35579 1960 aaKnown RBP9.36□□□□□ -0.91
USP39-216ENST00000490193 TBKBP1A7MCY6 615 aa9.36□□□□□ -0.91
USP39-216ENST00000490193 HBP1O60381 514 aa9.36□□□□□ -0.91
USP39-216ENST00000490193 PPFIA3O75145 1194 aa9.36□□□□□ -0.91
USP39-216ENST00000490193 RPS6KA5O75582 802 aa9.36□□□□□ -0.91
USP39-216ENST00000490193 PLEKHA8P1O95397 391 aa9.36□□□□□ -0.91
USP39-216ENST00000490193 GSPT1P15170 499 aaKnown RBP9.36□□□□□ -0.91
USP39-216ENST00000490193 LAG3P18627 525 aa9.36□□□□□ -0.91
USP39-216ENST00000490193 NFX1Q12986 1120 aaKnown RBP9.36□□□□□ -0.91
USP39-216ENST00000490193 UBE2SQ16763 222 aa9.36□□□□□ -0.91
USP39-216ENST00000490193 TMEM266Q2M3C6 531 aa9.36□□□□□ -0.91
USP39-216ENST00000490193 FAM102BQ5T8I3 360 aa9.36□□□□□ -0.91
USP39-216ENST00000490193 UBALD2Q8IYN6 164 aa9.36□□□□□ -0.91
USP39-216ENST00000490193 THNSL1Q8IYQ7 743 aa9.36□□□□□ -0.91
USP39-216ENST00000490193 KIAA0319LQ8IZA0 1049 aa9.36□□□□□ -0.91
USP39-216ENST00000490193 TMTC2Q8N394 836 aa9.36□□□□□ -0.91
USP39-216ENST00000490193 TMEM40Q8WWA1 233 aa9.36□□□□□ -0.91
USP39-216ENST00000490193 MRPS27Q92552 414 aaKnown RBP9.36□□□□□ -0.91
USP39-216ENST00000490193 ADAM2Q99965 735 aa9.36□□□□□ -0.91
USP39-216ENST00000490193 SDF4Q9BRK5 362 aa9.36□□□□□ -0.91
USP39-216ENST00000490193 MYL10Q9BUA6 226 aa9.36□□□□□ -0.91
USP39-216ENST00000490193 NGRNQ9NPE2 291 aaKnown RBP9.36□□□□□ -0.91
USP39-216ENST00000490193 TYW1Q9NV66 732 aaKnown RBP9.36□□□□□ -0.91
USP39-216ENST00000490193 TMEM260Q9NX78 707 aa9.36□□□□□ -0.91
USP39-216ENST00000490193 PKD2L1Q9P0L9 805 aa9.36□□□□□ -0.91
USP39-216ENST00000490193 DAXXQ9UER7 740 aaPredicted RBP9.36□□□□□ -0.91
USP39-216ENST00000490193 NOC2LQ9Y3T9 749 aaKnown RBP9.36□□□□□ -0.91
USP39-216ENST00000490193 PCDHGA4Q9Y5G9 962 aa9.36□□□□□ -0.91
USP39-216ENST00000490193 MYO10Q9HD67 2058 aa9.36□□□□□ -0.91
USP39-216ENST00000490193 DENND3A2RUS2 1198 aa9.35□□□□□ -0.91
USP39-216ENST00000490193 C2orf72A6NCS6 295 aa9.35□□□□□ -0.91
USP39-216ENST00000490193 ARHGAP33O14559 1287 aa9.35□□□□□ -0.91
USP39-216ENST00000490193 GPR182O15218 404 aa9.35□□□□□ -0.91
USP39-216ENST00000490193 SGSM2O43147 1006 aa9.35□□□□□ -0.91
USP39-216ENST00000490193 CALM1P0DP23 149 aa9.35□□□□□ -0.91
USP39-216ENST00000490193 CALM2P0DP24 149 aa9.35□□□□□ -0.91
USP39-216ENST00000490193 CALM3P0DP25 149 aa9.35□□□□□ -0.91
USP39-216ENST00000490193 CHMLP26374 656 aa9.35□□□□□ -0.91
USP39-216ENST00000490193 KLRC1P26715 233 aa9.35□□□□□ -0.91
USP39-216ENST00000490193 PDE4AP27815 886 aa9.35□□□□□ -0.91
USP39-216ENST00000490193 PPM1AP35813 382 aa9.35□□□□□ -0.91
USP39-216ENST00000490193 NBL1P41271 181 aa9.35□□□□□ -0.91
USP39-216ENST00000490193 TECP42680 631 aa9.35□□□□□ -0.91
USP39-216ENST00000490193 LIFRP42702 1097 aa9.35□□□□□ -0.91
USP39-216ENST00000490193 ITGB3BPQ13352 177 aaPredicted RBP9.35□□□□□ -0.91
USP39-216ENST00000490193 DSC3Q14574 896 aa9.35□□□□□ -0.91
USP39-216ENST00000490193 SPOUT1Q5T280 376 aaKnown RBP9.35□□□□□ -0.91
USP39-216ENST00000490193 TTC22Q5TAA0 569 aa9.35□□□□□ -0.91
USP39-216ENST00000490193 ADGRD1Q6QNK2 874 aa9.35□□□□□ -0.91
USP39-216ENST00000490193 ATOH1Q92858 354 aaPredicted RBP9.35□□□□□ -0.91
USP39-216ENST00000490193 MAP4K1Q92918 833 aa9.35□□□□□ -0.91
USP39-216ENST00000490193 TMEM117Q9H0C3 514 aa9.35□□□□□ -0.91
USP39-216ENST00000490193 CDHR5Q9HBB8 845 aa9.35□□□□□ -0.91
USP39-216ENST00000490193 ATP6V0A4Q9HBG4 840 aa9.35□□□□□ -0.91
USP39-216ENST00000490193 AGO4Q9HCK5 861 aaKnown RBP9.35□□□□□ -0.91
USP39-216ENST00000490193 PUF60Q9UHX1 559 aaKnown RBP9.35□□□□□ -0.91
USP39-216ENST00000490193 ST3GAL5Q9UNP4 418 aa9.35□□□□□ -0.91
USP39-216ENST00000490193 SORCS3Q9UPU3 1222 aa9.35□□□□□ -0.91
USP39-216ENST00000490193 NR2E1Q9Y466 385 aa9.35□□□□□ -0.91
USP39-216ENST00000490193 FAM186AA6NE01 2351 aa9.35□□□□□ -0.91
USP39-216ENST00000490193 RIF1Q5UIP0 2472 aaKnown RBP9.34□□□□□ -0.91
USP39-216ENST00000490193 HIDE1A8MVS5 230 aa9.34□□□□□ -0.91
USP39-216ENST00000490193 ZBTB42B2RXF5 422 aa9.34□□□□□ -0.91
USP39-216ENST00000490193 H0Y858 1186 aa9.34□□□□□ -0.91
USP39-216ENST00000490193 TK2O00142 265 aa9.34□□□□□ -0.91
USP39-216ENST00000490193 MEIS1O00470 390 aa9.34□□□□□ -0.91
USP39-216ENST00000490193 SH2B2O14492 632 aaPredicted RBP9.34□□□□□ -0.91
USP39-216ENST00000490193 HOXA2O43364 376 aa9.34□□□□□ -0.91
USP39-216ENST00000490193 PRC1O43663 620 aa9.34□□□□□ -0.91
USP39-216ENST00000490193 FOSP01100 380 aaPredicted RBP9.34□□□□□ -0.91
USP39-216ENST00000490193 PDGFBP01127 241 aaPredicted RBP9.34□□□□□ -0.91
USP39-216ENST00000490193 ARP10275 920 aa9.34□□□□□ -0.91
USP39-216ENST00000490193 FGFR1P11362 822 aa9.34□□□□□ -0.91
USP39-216ENST00000490193 CRYBB1P53674 252 aaPredicted RBP9.34□□□□□ -0.91
USP39-216ENST00000490193 ITIH3Q06033 890 aa9.34□□□□□ -0.91
USP39-216ENST00000490193 MTMR3Q13615 1198 aa9.34□□□□□ -0.91
USP39-216ENST00000490193 TPRNQ4KMQ1 711 aa9.34□□□□□ -0.91
USP39-216ENST00000490193 CEP55Q53EZ4 464 aa9.34□□□□□ -0.91
USP39-216ENST00000490193 ZNF484Q5JVG2 852 aa9.34□□□□□ -0.91
USP39-216ENST00000490193 PLPP4Q5VZY2 271 aa9.34□□□□□ -0.91
USP39-216ENST00000490193 PPP1R18Q6NYC8 613 aa9.34□□□□□ -0.91
USP39-216ENST00000490193 CASC1Q6TDU7 716 aa9.34□□□□□ -0.91
USP39-216ENST00000490193 ABHD15Q6UXT9 468 aa9.34□□□□□ -0.91
USP39-216ENST00000490193 TMTC3Q6ZXV5 915 aa9.34□□□□□ -0.91
USP39-216ENST00000490193 NIPA1Q7RTP0 329 aa9.34□□□□□ -0.91
USP39-216ENST00000490193 ASCL5Q7RTU5 278 aa9.34□□□□□ -0.91
USP39-216ENST00000490193 FAM228AQ86W67 206 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms