RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 MICALL1Q8N3F8 863 aa10.99□□□□□ -0.65
TMEM39A-210ENST00000490099 FIBCD1Q8N539 461 aa10.99□□□□□ -0.65
TMEM39A-210ENST00000490099 HLA-CQ95604 372 aa10.99□□□□□ -0.65
TMEM39A-210ENST00000490099 FAM167AQ96KS9 214 aa10.99□□□□□ -0.65
TMEM39A-210ENST00000490099 DCBLD2Q96PD2 775 aa10.99□□□□□ -0.65
TMEM39A-210ENST00000490099 PLVAPQ9BX97 442 aa10.99□□□□□ -0.65
TMEM39A-210ENST00000490099 SLKQ9H2G2 1235 aaPredicted RBP10.99□□□□□ -0.65
TMEM39A-210ENST00000490099 ADAMTS10Q9H324 1103 aa10.99□□□□□ -0.65
TMEM39A-210ENST00000490099 CEP131Q9UPN4 1083 aa10.99□□□□□ -0.65
TMEM39A-210ENST00000490099 NOC2LQ9Y3T9 749 aaKnown RBP10.99□□□□□ -0.65
TMEM39A-210ENST00000490099 MYH9P35579 1960 aaKnown RBP10.99□□□□□ -0.65
TMEM39A-210ENST00000490099 EVPLQ92817 2033 aa10.98□□□□□ -0.65
TMEM39A-210ENST00000490099 IGKV6-21A0A0C4DH24 114 aa10.98□□□□□ -0.65
TMEM39A-210ENST00000490099 C9IYK1 514 aa10.98□□□□□ -0.65
TMEM39A-210ENST00000490099 TNFRSF10AO00220 468 aa10.98□□□□□ -0.65
TMEM39A-210ENST00000490099 MGEA5O60502 916 aa10.98□□□□□ -0.65
TMEM39A-210ENST00000490099 GAS7O60861 476 aa10.98□□□□□ -0.65
TMEM39A-210ENST00000490099 CDKL5O76039 1030 aa10.98□□□□□ -0.65
TMEM39A-210ENST00000490099 TDP2O95551 362 aa10.98□□□□□ -0.65
TMEM39A-210ENST00000490099 OATP04181 439 aa10.98□□□□□ -0.65
TMEM39A-210ENST00000490099 KCNQ1P51787 676 aa10.98□□□□□ -0.65
TMEM39A-210ENST00000490099 JAK3P52333 1124 aa10.98□□□□□ -0.65
TMEM39A-210ENST00000490099 PAK2Q13177 524 aa10.98□□□□□ -0.65
TMEM39A-210ENST00000490099 STK3Q13188 491 aa10.98□□□□□ -0.65
TMEM39A-210ENST00000490099 GPM6BQ13491 265 aa10.98□□□□□ -0.65
TMEM39A-210ENST00000490099 CAMK1Q14012 370 aa10.98□□□□□ -0.65
TMEM39A-210ENST00000490099 DSC3Q14574 896 aa10.98□□□□□ -0.65
TMEM39A-210ENST00000490099 ANKRD1Q15327 319 aa10.98□□□□□ -0.65
TMEM39A-210ENST00000490099 UGCGQ16739 394 aa10.98□□□□□ -0.65
TMEM39A-210ENST00000490099 PTPROQ16827 1216 aa10.98□□□□□ -0.65
TMEM39A-210ENST00000490099 LRCH2Q5VUJ6 765 aa10.98□□□□□ -0.65
TMEM39A-210ENST00000490099 KRT25Q7Z3Z0 450 aa10.98□□□□□ -0.65
TMEM39A-210ENST00000490099 TNFRSF25Q93038 417 aa10.98□□□□□ -0.65
TMEM39A-210ENST00000490099 GJA10Q969M2 543 aa10.98□□□□□ -0.65
TMEM39A-210ENST00000490099 UNC45AQ9H3U1 944 aa10.98□□□□□ -0.65
TMEM39A-210ENST00000490099 KCNMB3Q9NPA1 279 aa10.98□□□□□ -0.65
TMEM39A-210ENST00000490099 RGS18Q9NS28 235 aa10.98□□□□□ -0.65
TMEM39A-210ENST00000490099 NRBP2Q9NSY0 501 aa10.98□□□□□ -0.65
TMEM39A-210ENST00000490099 ST3GAL5Q9UNP4 418 aa10.98□□□□□ -0.65
TMEM39A-210ENST00000490099 KCNJ14Q9UNX9 436 aa10.98□□□□□ -0.65
TMEM39A-210ENST00000490099 RWDD3Q9Y3V2 267 aa10.98□□□□□ -0.65
TMEM39A-210ENST00000490099 ADGRA3Q8IWK6 1321 aa10.98□□□□□ -0.65
TMEM39A-210ENST00000490099 GPR182O15218 404 aa10.97□□□□□ -0.65
TMEM39A-210ENST00000490099 EIF5BO60841 1220 aaKnown RBP10.97□□□□□ -0.65
TMEM39A-210ENST00000490099 RPS6KA5O75582 802 aa10.97□□□□□ -0.65
TMEM39A-210ENST00000490099 SARSP49591 514 aaKnown RBP10.97□□□□□ -0.65
TMEM39A-210ENST00000490099 AK2P54819 239 aa10.97□□□□□ -0.65
TMEM39A-210ENST00000490099 NONOQ15233 471 aaKnown RBP eCLIP10.97□□□□□ -0.65
TMEM39A-210ENST00000490099 ME3Q16798 604 aa10.97□□□□□ -0.65
TMEM39A-210ENST00000490099 CTC1Q2NKJ3 1217 aa10.97□□□□□ -0.65
TMEM39A-210ENST00000490099 LEXMQ3ZCV2 418 aa10.97□□□□□ -0.65
TMEM39A-210ENST00000490099 NAALADL2Q58DX5 795 aa10.97□□□□□ -0.65
TMEM39A-210ENST00000490099 ODR4Q5SWX8 454 aa10.97□□□□□ -0.65
TMEM39A-210ENST00000490099 SLC24A5Q71RS6 500 aa10.97□□□□□ -0.65
TMEM39A-210ENST00000490099 CKAP2LQ8IYA6 745 aa10.97□□□□□ -0.65
TMEM39A-210ENST00000490099 BANK1Q8NDB2 785 aa10.97□□□□□ -0.65
TMEM39A-210ENST00000490099 P2RX5Q93086 422 aa10.97□□□□□ -0.65
TMEM39A-210ENST00000490099 FAM20AQ96MK3 541 aa10.97□□□□□ -0.65
TMEM39A-210ENST00000490099 UHRF1Q96T88 793 aaPredicted RBP10.97□□□□□ -0.65
TMEM39A-210ENST00000490099 TEKT3Q9BXF9 490 aa10.97□□□□□ -0.65
TMEM39A-210ENST00000490099 LMAN2LQ9H0V9 348 aa10.97□□□□□ -0.65
TMEM39A-210ENST00000490099 C1orf112Q9NSG2 853 aa10.97□□□□□ -0.65
TMEM39A-210ENST00000490099 GJB4Q9NTQ9 266 aa10.97□□□□□ -0.65
TMEM39A-210ENST00000490099 VAV3Q9UKW4 847 aa10.97□□□□□ -0.65
TMEM39A-210ENST00000490099 STK24Q9Y6E0 443 aa10.97□□□□□ -0.65
TMEM39A-210ENST00000490099 COL4A4P53420 1690 aaPredicted RBP10.97□□□□□ -0.65
TMEM39A-210ENST00000490099 WDR81Q562E7 1941 aa10.97□□□□□ -0.65
TMEM39A-210ENST00000490099 LOXHD1Q8IVV2 1947 aa10.96□□□□□ -0.65
TMEM39A-210ENST00000490099 TBX3O15119 743 aa10.96□□□□□ -0.65
TMEM39A-210ENST00000490099 GRM6O15303 877 aa10.96□□□□□ -0.65
TMEM39A-210ENST00000490099 SLC37A4O43826 429 aa10.96□□□□□ -0.65
TMEM39A-210ENST00000490099 SEC24BO95487 1268 aa10.96□□□□□ -0.65
TMEM39A-210ENST00000490099 STAG3L1P0CL83 205 aa10.96□□□□□ -0.65
TMEM39A-210ENST00000490099 GCFC2P16383 781 aaKnown RBP10.96□□□□□ -0.65
TMEM39A-210ENST00000490099 EIF4BP23588 611 aaKnown RBP10.96□□□□□ -0.65
TMEM39A-210ENST00000490099 PRKCEQ02156 737 aa10.96□□□□□ -0.65
TMEM39A-210ENST00000490099 PPP2R5CQ13362 524 aa10.96□□□□□ -0.65
TMEM39A-210ENST00000490099 BTG3Q14201 252 aaPredicted RBP10.96□□□□□ -0.65
TMEM39A-210ENST00000490099 SKIV2LQ15477 1246 aaKnown RBP10.96□□□□□ -0.65
TMEM39A-210ENST00000490099 INF2Q27J81 1249 aa10.96□□□□□ -0.65
TMEM39A-210ENST00000490099 KIZQ2M2Z5 673 aa10.96□□□□□ -0.65
TMEM39A-210ENST00000490099 TMEM266Q2M3C6 531 aa10.96□□□□□ -0.65
TMEM39A-210ENST00000490099 TIGD5Q53EQ6 642 aa10.96□□□□□ -0.65
TMEM39A-210ENST00000490099 XKR3Q5GH77 459 aa10.96□□□□□ -0.65
TMEM39A-210ENST00000490099 EFCAB12Q6NXP0 572 aa10.96□□□□□ -0.65
TMEM39A-210ENST00000490099 FAM228AQ86W67 206 aa10.96□□□□□ -0.65
TMEM39A-210ENST00000490099 NEK9Q8TD19 979 aa10.96□□□□□ -0.65
TMEM39A-210ENST00000490099 OXER1Q8TDS5 423 aa10.96□□□□□ -0.65
TMEM39A-210ENST00000490099 HAS1Q92839 578 aa10.96□□□□□ -0.65
TMEM39A-210ENST00000490099 ADAM2Q99965 735 aa10.96□□□□□ -0.65
TMEM39A-210ENST00000490099 C11orf84Q9BUA3 381 aaPredicted RBP10.96□□□□□ -0.65
TMEM39A-210ENST00000490099 ELAC1Q9H777 363 aaKnown RBP10.96□□□□□ -0.65
TMEM39A-210ENST00000490099 UBE2ZQ9H832 354 aaPredicted RBP10.96□□□□□ -0.65
TMEM39A-210ENST00000490099 ORC3Q9UBD5 711 aaPredicted RBP10.96□□□□□ -0.65
TMEM39A-210ENST00000490099 DDX25Q9UHL0 483 aaKnown RBP10.96□□□□□ -0.65
TMEM39A-210ENST00000490099 TCEAL9Q9UHQ7 104 aa10.96□□□□□ -0.65
TMEM39A-210ENST00000490099 PLAGL2Q9UPG8 496 aa10.96□□□□□ -0.65
TMEM39A-210ENST00000490099 SAMM50Q9Y512 469 aa10.96□□□□□ -0.65
TMEM39A-210ENST00000490099 MRPL42Q9Y6G3 142 aaKnown RBP10.96□□□□□ -0.65
TMEM39A-210ENST00000490099 MUC3AQ02505 3323 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms