RNA–Protein interactions for RNA: ENST00000490056.5

SFXN5-220, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 906 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-220ENST00000490056 LINC01465Q8N7H1 131 aa18.65■□□□□ 0.58
SFXN5-220ENST00000490056 DHX33Q9H6R0 707 aaKnown RBP18.65■□□□□ 0.58
SFXN5-220ENST00000490056 BLOC1S4Q9NUP1 217 aa18.65■□□□□ 0.58
SFXN5-220ENST00000490056 CCDC39Q9UFE4 941 aa18.65■□□□□ 0.58
SFXN5-220ENST00000490056 IGKV6-21A0A0C4DH24 114 aa18.64■□□□□ 0.57
SFXN5-220ENST00000490056 SSBP05455 408 aaKnown RBP eCLIP18.64■□□□□ 0.57
SFXN5-220ENST00000490056 CKBP12277 381 aa18.64■□□□□ 0.57
SFXN5-220ENST00000490056 RAG1P15918 1043 aa18.64■□□□□ 0.57
SFXN5-220ENST00000490056 RFC5P40937 340 aa18.64■□□□□ 0.57
SFXN5-220ENST00000490056 MLLT1Q03111 559 aaPredicted RBP18.64■□□□□ 0.57
SFXN5-220ENST00000490056 DHX8Q14562 1220 aaKnown RBP18.64■□□□□ 0.57
SFXN5-220ENST00000490056 MCM6Q14566 821 aa18.64■□□□□ 0.57
SFXN5-220ENST00000490056 ZNF618Q5T7W0 954 aa18.64■□□□□ 0.57
SFXN5-220ENST00000490056 TAF2Q6P1X5 1199 aa18.64■□□□□ 0.57
SFXN5-220ENST00000490056 PADI6Q6TGC4 694 aa18.64■□□□□ 0.57
SFXN5-220ENST00000490056 POLD4Q9HCU8 107 aa18.64■□□□□ 0.57
SFXN5-220ENST00000490056 XPNPEP1Q9NQW7 623 aa18.64■□□□□ 0.57
SFXN5-220ENST00000490056 PRKAG2Q9UGJ0 569 aa18.64■□□□□ 0.57
SFXN5-220ENST00000490056 PPME1Q9Y570 386 aa18.64■□□□□ 0.57
SFXN5-220ENST00000490056 NR2E3Q9Y5X4 410 aa18.64■□□□□ 0.57
SFXN5-220ENST00000490056 A0A1B0GVL5 298 aa18.63■□□□□ 0.57
SFXN5-220ENST00000490056 CTSHP09668 335 aa18.63■□□□□ 0.57
SFXN5-220ENST00000490056 PLA2G4BP0C869 781 aa18.63■□□□□ 0.57
SFXN5-220ENST00000490056 CMA1P23946 247 aa18.63■□□□□ 0.57
SFXN5-220ENST00000490056 CCL23P55773 120 aa18.63■□□□□ 0.57
SFXN5-220ENST00000490056 TMEM62Q0P6H9 643 aa18.63■□□□□ 0.57
SFXN5-220ENST00000490056 BFSP2Q13515 415 aa18.63■□□□□ 0.57
SFXN5-220ENST00000490056 EMC2Q15006 297 aa18.63■□□□□ 0.57
SFXN5-220ENST00000490056 NAALADL2Q58DX5 795 aa18.63■□□□□ 0.57
SFXN5-220ENST00000490056 MAEAQ7L5Y9 396 aa18.63■□□□□ 0.57
SFXN5-220ENST00000490056 RETREG2Q8NC44 543 aa18.63■□□□□ 0.57
SFXN5-220ENST00000490056 CAGE1Q8TC20 777 aa18.63■□□□□ 0.57
SFXN5-220ENST00000490056 SLC7A3Q8WY07 619 aa18.63■□□□□ 0.57
SFXN5-220ENST00000490056 RAD54LQ92698 747 aa18.63■□□□□ 0.57
SFXN5-220ENST00000490056 TMEM143Q96AN5 459 aa18.63■□□□□ 0.57
SFXN5-220ENST00000490056 PPP1R16BQ96T49 567 aa18.63■□□□□ 0.57
SFXN5-220ENST00000490056 WNT8AQ9H1J5 351 aa18.63■□□□□ 0.57
SFXN5-220ENST00000490056 FAM13BQ9NYF5 915 aa18.63■□□□□ 0.57
SFXN5-220ENST00000490056 DGAT1O75907 488 aa18.62■□□□□ 0.57
SFXN5-220ENST00000490056 TIMP1P01033 207 aa18.62■□□□□ 0.57
SFXN5-220ENST00000490056 VTNP04004 478 aa18.62■□□□□ 0.57
SFXN5-220ENST00000490056 TMOD1P28289 359 aa18.62■□□□□ 0.57
SFXN5-220ENST00000490056 SLC12A3P55017 1021 aa18.62■□□□□ 0.57
SFXN5-220ENST00000490056 RBL2Q08999 1139 aa18.62■□□□□ 0.57
SFXN5-220ENST00000490056 RPAINQ86UA6 219 aa18.62■□□□□ 0.57
SFXN5-220ENST00000490056 KCTD17Q8N5Z5 321 aa18.62■□□□□ 0.57
SFXN5-220ENST00000490056 CCDC155Q8N6L0 562 aa18.62■□□□□ 0.57
SFXN5-220ENST00000490056 SYT2Q8N9I0 419 aaPredicted RBP18.62■□□□□ 0.57
SFXN5-220ENST00000490056 SCLYQ96I15 445 aa18.62■□□□□ 0.57
SFXN5-220ENST00000490056 ZNF668Q96K58 619 aaPredicted RBP18.62■□□□□ 0.57
SFXN5-220ENST00000490056 MTRQ99707 1265 aa18.62■□□□□ 0.57
SFXN5-220ENST00000490056 JPH2Q9BR39 696 aaPredicted RBP18.62■□□□□ 0.57
SFXN5-220ENST00000490056 RUSC1Q9BVN2 902 aa18.62■□□□□ 0.57
SFXN5-220ENST00000490056 GOLPH3LQ9H4A5 285 aa18.62■□□□□ 0.57
SFXN5-220ENST00000490056 ATP6V0A4Q9HBG4 840 aa18.62■□□□□ 0.57
SFXN5-220ENST00000490056 AKT3Q9Y243 479 aa18.62■□□□□ 0.57
SFXN5-220ENST00000490056 A0A1W2PQ27 194 aa18.61■□□□□ 0.57
SFXN5-220ENST00000490056 A0A1W2PQ64 194 aa18.61■□□□□ 0.57
SFXN5-220ENST00000490056 A0A1W2PQD8 194 aa18.61■□□□□ 0.57
SFXN5-220ENST00000490056 PITPNM1O00562 1244 aa18.61■□□□□ 0.57
SFXN5-220ENST00000490056 POLR2DO15514 142 aaKnown RBP18.61■□□□□ 0.57
SFXN5-220ENST00000490056 SELPP16109 830 aa18.61■□□□□ 0.57
SFXN5-220ENST00000490056 PFKFB1P16118 471 aa18.61■□□□□ 0.57
SFXN5-220ENST00000490056 CYP11B2P19099 503 aa18.61■□□□□ 0.57
SFXN5-220ENST00000490056 STAT6P42226 847 aa18.61■□□□□ 0.57
SFXN5-220ENST00000490056 E2F4Q16254 413 aa18.61■□□□□ 0.57
SFXN5-220ENST00000490056 RINT1Q6NUQ1 792 aa18.61■□□□□ 0.57
SFXN5-220ENST00000490056 TRAF7Q6Q0C0 670 aa18.61■□□□□ 0.57
SFXN5-220ENST00000490056 CCDC73Q6ZRK6 1079 aa18.61■□□□□ 0.57
SFXN5-220ENST00000490056 RSPH3Q86UC2 560 aa18.61■□□□□ 0.57
SFXN5-220ENST00000490056 FSIP1Q8NA03 581 aa18.61■□□□□ 0.57
SFXN5-220ENST00000490056 LARP4BQ92615 738 aaKnown RBP18.61■□□□□ 0.57
SFXN5-220ENST00000490056 BADQ92934 168 aa18.61■□□□□ 0.57
SFXN5-220ENST00000490056 DHX58Q96C10 678 aa18.61■□□□□ 0.57
SFXN5-220ENST00000490056 OSBPL7Q9BZF2 842 aa18.61■□□□□ 0.57
SFXN5-220ENST00000490056 CDHR5Q9HBB8 845 aa18.61■□□□□ 0.57
SFXN5-220ENST00000490056 GPRC5CQ9NQ84 441 aa18.61■□□□□ 0.57
SFXN5-220ENST00000490056 SUCLA2Q9P2R7 463 aaPredicted RBP18.61■□□□□ 0.57
SFXN5-220ENST00000490056 KCNH3Q9ULD8 1083 aa18.61■□□□□ 0.57
SFXN5-220ENST00000490056 CDY2AQ9Y6F7 541 aa18.61■□□□□ 0.57
SFXN5-220ENST00000490056 NPHP3-ACAD11A0A0J9YXS1 232 aa18.6■□□□□ 0.57
SFXN5-220ENST00000490056 GOLGA6L4A6NEF3 574 aa18.6■□□□□ 0.57
SFXN5-220ENST00000490056 RSPH10B2B2RC85 870 aa18.6■□□□□ 0.57
SFXN5-220ENST00000490056 GADD45BO75293 160 aaPredicted RBP18.6■□□□□ 0.57
SFXN5-220ENST00000490056 CHRNA1P02708 482 aa18.6■□□□□ 0.57
SFXN5-220ENST00000490056 IQCF3P0C7M6 154 aa18.6■□□□□ 0.57
SFXN5-220ENST00000490056 RSPH10BP0C881 870 aa18.6■□□□□ 0.57
SFXN5-220ENST00000490056 DNM2P50570 870 aa18.6■□□□□ 0.57
SFXN5-220ENST00000490056 MRPS6P82932 125 aaKnown RBP18.6■□□□□ 0.57
SFXN5-220ENST00000490056 RAD51AP2Q09MP3 1159 aa18.6■□□□□ 0.57
SFXN5-220ENST00000490056 KIZQ2M2Z5 673 aa18.6■□□□□ 0.57
SFXN5-220ENST00000490056 ARSHQ5FYA8 562 aa18.6■□□□□ 0.57
SFXN5-220ENST00000490056 C1orf186Q6ZWK4 172 aa18.6■□□□□ 0.57
SFXN5-220ENST00000490056 LRRC8DQ7L1W4 858 aa18.6■□□□□ 0.57
SFXN5-220ENST00000490056 GPBP1Q86WP2 473 aa18.6■□□□□ 0.57
SFXN5-220ENST00000490056 KSR1Q8IVT5 923 aa18.6■□□□□ 0.57
SFXN5-220ENST00000490056 EXOC8Q8IYI6 725 aa18.6■□□□□ 0.57
SFXN5-220ENST00000490056 NME8Q8N427 588 aa18.6■□□□□ 0.57
SFXN5-220ENST00000490056 MAP7D2Q96T17 732 aa18.6■□□□□ 0.57
SFXN5-220ENST00000490056 STK17AQ9UEE5 414 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms