RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 MAEAQ7L5Y9 396 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 CROCCP2Q86T23 111 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 GRAMD1CQ8IYS0 662 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 RGL4Q8IZJ4 473 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 AGGF1Q8N302 714 aaeCLIP5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 PHC3Q8NDX5 983 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 OR2W6PQ8NHA6 318 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 MDM1Q8TC05 714 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 ATXN2LQ8WWM7 1075 aaKnown RBP5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 RSPH1Q8WYR4 309 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 GATA6Q92908 595 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 SLC10A4Q96EP9 437 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 PAGE5Q96GU1 130 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 ZNF333Q96JL9 665 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 FAM81BQ96LP2 452 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 CCDC42Q96M95 316 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 TMEM237Q96Q45 408 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 NR1H4Q96RI1 486 aaPredicted RBP5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 SMC6Q96SB8 1091 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 KRT12Q99456 494 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 ALG1Q9BT22 464 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 CARD9Q9H257 536 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 SEC31BQ9NQW1 1179 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 ZNF358Q9NW07 568 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 LRWD1Q9UFC0 647 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 ARL2BPQ9Y2Y0 163 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 WDR19Q8NEZ3 1342 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 BCL9O00512 1426 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 KLF18A0A0U1RQI7 1052 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 A0A1W2PQJ5 194 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 NVLO15381 856 aaKnown RBP5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 ECE2O60344 883 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 MOCS3O95396 460 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 GJB6O95452 261 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 BCRP11274 1271 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 EEF1GP26641 437 aaKnown RBP5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 HNRNPH3P31942 346 aaKnown RBP5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 CXCR5P32302 372 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 PTDSS1P48651 473 aaKnown RBP5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 SESN3P58005 492 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 CYP27A1Q02318 531 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 TRIM29Q14134 588 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 HLTFQ14527 1009 aaKnown RBP eCLIP5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 GSTA3Q16772 222 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 MUM1Q2TAK8 710 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 PI16Q6UXB8 463 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 SEPT14Q6ZU15 432 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 NCCRP1Q6ZVX7 275 aaPredicted RBP5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 ZNF554Q86TJ5 538 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 EXOC3L1Q86VI1 746 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 HOOK3Q86VS8 718 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 TNS4Q8IZW8 715 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 SDR16C5Q8N3Y7 309 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 KIF2BQ8N4N8 673 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 WDR60Q8WVS4 1066 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 UBLCP1Q8WVY7 318 aaPredicted RBP5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 TEKT1Q969V4 418 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 PGM2Q96G03 612 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 CATSPER2Q96P56 530 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 NOX5Q96PH1 765 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 NUDCD1Q96RS6 583 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 MTA3Q9BTC8 594 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 IFIH1Q9BYX4 1025 aaKnown RBP5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 PHAXQ9H814 394 aaKnown RBP5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 DCLRE1BQ9H816 532 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 GJB4Q9NTQ9 266 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 TXLNGQ9NUQ3 528 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 SMARCAL1Q9NZC9 954 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 IL1RAPL1Q9NZN1 696 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 STOML1Q9UBI4 398 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 FBXL5Q9UKA1 691 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 ZMYND8Q9ULU4 1186 aaPredicted RBP5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 PA2G4Q9UQ80 394 aaKnown RBP5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 CTNND2Q9UQB3 1225 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 ZNF148Q9UQR1 794 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 THRAP3Q9Y2W1 955 aaKnown RBP5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 CAPN6Q9Y6Q1 641 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 MROH7Q68CQ1 1323 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 ZNF609O15014 1411 aa5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 EDC4Q6P2E9 1401 aaKnown RBP5.16□□□□□ -1.58
SNRNP40-206ENST00000489853 ZSCAN5CA6NGD5 496 aaPredicted RBP5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 SIGLEC16A6NMB1 481 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 GOLGA8BA8MQT2 603 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 TMEM229AB2RXF0 380 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 BTBD19C9JJ37 291 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 CES2O00748 559 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 PPEF1O14829 653 aaPredicted RBP5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 RAD51CO43502 376 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 TOM1O60784 492 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 TJP3O95049 919 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 ASLP04424 464 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 SRGNP10124 158 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 TROVE2P10155 538 aaKnown RBP eCLIP5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 ECHS1P30084 290 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 VHLP40337 213 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 SLC19A1P41440 591 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 PAK1Q13153 545 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 PRPF4BQ13523 1007 aaKnown RBP5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 MRPL58Q14197 206 aaKnown RBP5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 MYBPC2Q14324 1141 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms