RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 TAP1Q03518 808 aa21.43■■□□□ 1.02
EPHB4-207ENST00000489808 CTTNQ14247 550 aaKnown RBP21.43■■□□□ 1.02
EPHB4-207ENST00000489808 TPH2Q8IWU9 490 aa21.43■■□□□ 1.02
EPHB4-207ENST00000489808 C4orf32Q8N8J7 132 aa21.43■■□□□ 1.02
EPHB4-207ENST00000489808 TMEM40Q8WWA1 233 aa21.43■■□□□ 1.02
EPHB4-207ENST00000489808 PPP1R16BQ96T49 567 aa21.43■■□□□ 1.02
EPHB4-207ENST00000489808 FTHL17Q9BXU8 183 aa21.43■■□□□ 1.02
EPHB4-207ENST00000489808 ADAMTS10Q9H324 1103 aa21.43■■□□□ 1.02
EPHB4-207ENST00000489808 PRDM12Q9H4Q4 367 aa21.43■■□□□ 1.02
EPHB4-207ENST00000489808 CYP26B1Q9NR63 512 aa21.43■■□□□ 1.02
EPHB4-207ENST00000489808 NOC2LQ9Y3T9 749 aaKnown RBP21.43■■□□□ 1.02
EPHB4-207ENST00000489808 INSL6Q9Y581 213 aa21.43■■□□□ 1.02
EPHB4-207ENST00000489808 LCHNA4D1U4 455 aa21.42■■□□□ 1.02
EPHB4-207ENST00000489808 H3BQV1 296 aa21.42■■□□□ 1.02
EPHB4-207ENST00000489808 MAFO75444 373 aaPredicted RBP21.42■■□□□ 1.02
EPHB4-207ENST00000489808 RPS6KA5O75582 802 aa21.42■■□□□ 1.02
EPHB4-207ENST00000489808 ARHGEF15O94989 841 aa21.42■■□□□ 1.02
EPHB4-207ENST00000489808 YWHABP31946 246 aaKnown RBP21.42■■□□□ 1.02
EPHB4-207ENST00000489808 NPEPPSP55786 919 aa21.42■■□□□ 1.02
EPHB4-207ENST00000489808 NLRP11P59045 1033 aaKnown RBP21.42■■□□□ 1.02
EPHB4-207ENST00000489808 HTRA4P83105 476 aaPredicted RBP21.42■■□□□ 1.02
EPHB4-207ENST00000489808 CYP4A11Q02928 519 aa21.42■■□□□ 1.02
EPHB4-207ENST00000489808 PAK2Q13177 524 aa21.42■■□□□ 1.02
EPHB4-207ENST00000489808 TMEM266Q2M3C6 531 aa21.42■■□□□ 1.02
EPHB4-207ENST00000489808 LARP1BQ659C4 914 aaKnown RBP21.42■■□□□ 1.02
EPHB4-207ENST00000489808 PLA2G4FQ68DD2 849 aa21.42■■□□□ 1.02
EPHB4-207ENST00000489808 MCTP1Q6DN14 999 aa21.42■■□□□ 1.02
EPHB4-207ENST00000489808 FAM43BQ6ZT52 329 aaPredicted RBP21.42■■□□□ 1.02
EPHB4-207ENST00000489808 OTUD6AQ7L8S5 288 aa21.42■■□□□ 1.02
EPHB4-207ENST00000489808 CEP170P1Q96L14 293 aa21.42■■□□□ 1.02
EPHB4-207ENST00000489808 OSMRQ99650 979 aa21.42■■□□□ 1.02
EPHB4-207ENST00000489808 CDH23Q9H251 3354 aa21.41■■□□□ 1.02
EPHB4-207ENST00000489808 ZBTB39O15060 712 aa21.41■■□□□ 1.02
EPHB4-207ENST00000489808 GPR182O15218 404 aa21.41■■□□□ 1.02
EPHB4-207ENST00000489808 UPP2O95045 317 aa21.41■■□□□ 1.02
EPHB4-207ENST00000489808 LYPLA2O95372 231 aa21.41■■□□□ 1.02
EPHB4-207ENST00000489808 OR52Z1P0C646 297 aa21.41■■□□□ 1.02
EPHB4-207ENST00000489808 TECP42680 631 aa21.41■■□□□ 1.02
EPHB4-207ENST00000489808 DNM2P50570 870 aa21.41■■□□□ 1.02
EPHB4-207ENST00000489808 CDC42EP1Q00587 391 aa21.41■■□□□ 1.02
EPHB4-207ENST00000489808 NFX1Q12986 1120 aaKnown RBP21.41■■□□□ 1.02
EPHB4-207ENST00000489808 DRP2Q13474 957 aa21.41■■□□□ 1.02
EPHB4-207ENST00000489808 NBR1Q14596 966 aa21.41■■□□□ 1.02
EPHB4-207ENST00000489808 ODR4Q5SWX8 454 aa21.41■■□□□ 1.02
EPHB4-207ENST00000489808 ZNF579Q8NAF0 562 aaKnown RBP21.41■■□□□ 1.02
EPHB4-207ENST00000489808 JPH2Q9BR39 696 aaPredicted RBP21.41■■□□□ 1.02
EPHB4-207ENST00000489808 TMX1Q9H3N1 280 aa21.41■■□□□ 1.02
EPHB4-207ENST00000489808 ERVK-5Q9HDB9 667 aa21.41■■□□□ 1.02
EPHB4-207ENST00000489808 ST3GAL5Q9UNP4 418 aa21.41■■□□□ 1.02
EPHB4-207ENST00000489808 PPME1Q9Y570 386 aa21.41■■□□□ 1.02
EPHB4-207ENST00000489808 EXOC8Q8IYI6 725 aa21.4■■□□□ 1.02
EPHB4-207ENST00000489808 NEK9Q8TD19 979 aa21.4■■□□□ 1.02
EPHB4-207ENST00000489808 LINC01599Q8WXQ3 324 aa21.4■■□□□ 1.02
EPHB4-207ENST00000489808 SUCLA2Q9P2R7 463 aaPredicted RBP21.4■■□□□ 1.02
EPHB4-207ENST00000489808 MYH9P35579 1960 aaKnown RBP21.39■■□□□ 1.02
EPHB4-207ENST00000489808 POTEMA6NI47 508 aa21.39■■□□□ 1.01
EPHB4-207ENST00000489808 FOSL2P15408 326 aa21.39■■□□□ 1.01
EPHB4-207ENST00000489808 EIF4BP23588 611 aaKnown RBP21.39■■□□□ 1.01
EPHB4-207ENST00000489808 GPC3P51654 580 aa21.39■■□□□ 1.01
EPHB4-207ENST00000489808 FAM228AQ86W67 206 aa21.39■■□□□ 1.01
EPHB4-207ENST00000489808 TSPYL2Q9H2G4 693 aaPredicted RBP21.39■■□□□ 1.01
EPHB4-207ENST00000489808 DHX33Q9H6R0 707 aaKnown RBP21.39■■□□□ 1.01
EPHB4-207ENST00000489808 CERS4Q9HA82 394 aa21.39■■□□□ 1.01
EPHB4-207ENST00000489808 PCDHB6Q9Y5E3 794 aa21.39■■□□□ 1.01
EPHB4-207ENST00000489808 CHD9Q3L8U1 2897 aa21.38■■□□□ 1.01
EPHB4-207ENST00000489808 LINC01553A4QN01 128 aa21.38■■□□□ 1.01
EPHB4-207ENST00000489808 SPATA31C1P0DKV0 1188 aa21.38■■□□□ 1.01
EPHB4-207ENST00000489808 XRCC6P12956 609 aaKnown RBP eCLIP21.38■■□□□ 1.01
EPHB4-207ENST00000489808 RFC5P40937 340 aa21.38■■□□□ 1.01
EPHB4-207ENST00000489808 ADGRE1Q14246 886 aa21.38■■□□□ 1.01
EPHB4-207ENST00000489808 XKR9Q5GH70 373 aa21.38■■□□□ 1.01
EPHB4-207ENST00000489808 SP7Q8TDD2 431 aaPredicted RBP21.38■■□□□ 1.01
EPHB4-207ENST00000489808 SLC7A3Q8WY07 619 aa21.38■■□□□ 1.01
EPHB4-207ENST00000489808 ZNF668Q96K58 619 aaPredicted RBP21.38■■□□□ 1.01
EPHB4-207ENST00000489808 YME1L1Q96TA2 773 aa21.38■■□□□ 1.01
EPHB4-207ENST00000489808 GAS2L1Q99501 681 aaPredicted RBP21.38■■□□□ 1.01
EPHB4-207ENST00000489808 ANKEF1Q9NU02 776 aa21.38■■□□□ 1.01
EPHB4-207ENST00000489808 COL6A3P12111 3177 aa21.37■■□□□ 1.01
EPHB4-207ENST00000489808 DARSP14868 501 aaKnown RBP21.37■■□□□ 1.01
EPHB4-207ENST00000489808 PTGDRQ13258 359 aa21.37■■□□□ 1.01
EPHB4-207ENST00000489808 RILPL1Q5EBL4 403 aa21.37■■□□□ 1.01
EPHB4-207ENST00000489808 CATSPER3Q86XQ3 398 aa21.37■■□□□ 1.01
EPHB4-207ENST00000489808 CRIPAKQ8N1N5 446 aa21.37■■□□□ 1.01
EPHB4-207ENST00000489808 NLRP7Q8WX94 980 aa21.37■■□□□ 1.01
EPHB4-207ENST00000489808 ARNTL2Q8WYA1 636 aa21.37■■□□□ 1.01
EPHB4-207ENST00000489808 TUFT1Q9NNX1 390 aa21.37■■□□□ 1.01
EPHB4-207ENST00000489808 A0A087WWV3 80 aa21.36■■□□□ 1.01
EPHB4-207ENST00000489808 RFXAPO00287 272 aa21.36■■□□□ 1.01
EPHB4-207ENST00000489808 MGEA5O60502 916 aa21.36■■□□□ 1.01
EPHB4-207ENST00000489808 FXR2P51116 673 aaKnown RBP eCLIP21.36■■□□□ 1.01
EPHB4-207ENST00000489808 POLGP54098 1239 aaPredicted RBP21.36■■□□□ 1.01
EPHB4-207ENST00000489808 ERVK-21P61565 698 aa21.36■■□□□ 1.01
EPHB4-207ENST00000489808 SPRED2Q7Z698 418 aa21.36■■□□□ 1.01
EPHB4-207ENST00000489808 TGS1Q96RS0 853 aaKnown RBP21.36■■□□□ 1.01
EPHB4-207ENST00000489808 ADAM2Q99965 735 aa21.36■■□□□ 1.01
EPHB4-207ENST00000489808 POLR3CQ9BUI4 534 aaPredicted RBP21.36■■□□□ 1.01
EPHB4-207ENST00000489808 GCOM2Q9BZD3 368 aaPredicted RBP21.36■■□□□ 1.01
EPHB4-207ENST00000489808 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.36■■□□□ 1.01
EPHB4-207ENST00000489808 RGS18Q9NS28 235 aa21.36■■□□□ 1.01
EPHB4-207ENST00000489808 EPOPA6NHQ4 379 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms