RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 MAP7D2Q96T17 732 aa13.73□□□□□ -0.21
SMARCD3-213ENST00000489503 HSD17B14Q9BPX1 270 aa13.73□□□□□ -0.21
SMARCD3-213ENST00000489503 NKX2-4Q9H2Z4 354 aa13.73□□□□□ -0.21
SMARCD3-213ENST00000489503 ZSWIM4Q9H7M6 989 aa13.73□□□□□ -0.21
SMARCD3-213ENST00000489503 CYP26B1Q9NR63 512 aa13.73□□□□□ -0.21
SMARCD3-213ENST00000489503 SZT2Q5T011 3432 aa13.73□□□□□ -0.21
SMARCD3-213ENST00000489503 MYH15Q9Y2K3 1946 aa13.72□□□□□ -0.21
SMARCD3-213ENST00000489503 MAGEB2O15479 319 aa13.72□□□□□ -0.21
SMARCD3-213ENST00000489503 HSP90AA1P07900 732 aaKnown RBP13.72□□□□□ -0.21
SMARCD3-213ENST00000489503 SPATA31C1P0DKV0 1188 aa13.72□□□□□ -0.21
SMARCD3-213ENST00000489503 IKBKEQ14164 716 aa13.72□□□□□ -0.21
SMARCD3-213ENST00000489503 XKR9Q5GH70 373 aa13.72□□□□□ -0.21
SMARCD3-213ENST00000489503 TSHZ1Q6ZSZ6 1077 aa13.72□□□□□ -0.21
SMARCD3-213ENST00000489503 NEK9Q8TD19 979 aa13.72□□□□□ -0.21
SMARCD3-213ENST00000489503 PIGOQ8TEQ8 1089 aa13.72□□□□□ -0.21
SMARCD3-213ENST00000489503 LINC01599Q8WXQ3 324 aa13.72□□□□□ -0.21
SMARCD3-213ENST00000489503 SLC9A7Q96T83 725 aa13.72□□□□□ -0.21
SMARCD3-213ENST00000489503 TTYH1Q9H313 450 aaPredicted RBP13.72□□□□□ -0.21
SMARCD3-213ENST00000489503 NOC2LQ9Y3T9 749 aaKnown RBP13.72□□□□□ -0.21
SMARCD3-213ENST00000489503 KDM3AQ9Y4C1 1321 aa13.71□□□□□ -0.21
SMARCD3-213ENST00000489503 ABHD14A-ACY1A0A1B0GW23 586 aa13.71□□□□□ -0.21
SMARCD3-213ENST00000489503 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.71□□□□□ -0.21
SMARCD3-213ENST00000489503 DKC1O60832 514 aaKnown RBP eCLIP13.71□□□□□ -0.21
SMARCD3-213ENST00000489503 GPR32O75388 356 aa13.71□□□□□ -0.21
SMARCD3-213ENST00000489503 MAFO75444 373 aaPredicted RBP13.71□□□□□ -0.21
SMARCD3-213ENST00000489503 ARHGEF15O94989 841 aa13.71□□□□□ -0.21
SMARCD3-213ENST00000489503 IBSPP21815 317 aaPredicted RBP13.71□□□□□ -0.21
SMARCD3-213ENST00000489503 CDC25AP30304 524 aa13.71□□□□□ -0.21
SMARCD3-213ENST00000489503 FXR2P51116 673 aaKnown RBP eCLIP13.71□□□□□ -0.21
SMARCD3-213ENST00000489503 POLGP54098 1239 aaPredicted RBP13.71□□□□□ -0.21
SMARCD3-213ENST00000489503 NLRP11P59045 1033 aaKnown RBP13.71□□□□□ -0.21
SMARCD3-213ENST00000489503 ATP2C1P98194 919 aaPredicted RBP13.71□□□□□ -0.21
SMARCD3-213ENST00000489503 PAK2Q13177 524 aa13.71□□□□□ -0.21
SMARCD3-213ENST00000489503 EMC2Q15006 297 aa13.71□□□□□ -0.21
SMARCD3-213ENST00000489503 ECM1Q16610 540 aa13.71□□□□□ -0.21
SMARCD3-213ENST00000489503 BRAPQ7Z569 592 aa13.71□□□□□ -0.21
SMARCD3-213ENST00000489503 CATSPER3Q86XQ3 398 aa13.71□□□□□ -0.21
SMARCD3-213ENST00000489503 KSR1Q8IVT5 923 aa13.71□□□□□ -0.21
SMARCD3-213ENST00000489503 HERC6Q8IVU3 1022 aa13.71□□□□□ -0.21
SMARCD3-213ENST00000489503 MYOCDQ8IZQ8 938 aa13.71□□□□□ -0.21
SMARCD3-213ENST00000489503 DEFB123Q8N688 67 aa13.71□□□□□ -0.21
SMARCD3-213ENST00000489503 TMEM143Q96AN5 459 aa13.71□□□□□ -0.21
SMARCD3-213ENST00000489503 TIFAQ96CG3 184 aa13.71□□□□□ -0.21
SMARCD3-213ENST00000489503 SCLT1Q96NL6 688 aa13.71□□□□□ -0.21
SMARCD3-213ENST00000489503 IGKV6-21A0A0C4DH24 114 aa13.7□□□□□ -0.22
SMARCD3-213ENST00000489503 LCHNA4D1U4 455 aa13.7□□□□□ -0.22
SMARCD3-213ENST00000489503 STX6O43752 255 aa13.7□□□□□ -0.22
SMARCD3-213ENST00000489503 CSDE1O75534 798 aaKnown RBP13.7□□□□□ -0.22
SMARCD3-213ENST00000489503 RPLP2P05387 115 aaKnown RBP13.7□□□□□ -0.22
SMARCD3-213ENST00000489503 FGFR4P22455 802 aa13.7□□□□□ -0.22
SMARCD3-213ENST00000489503 TMOD1P28289 359 aa13.7□□□□□ -0.22
SMARCD3-213ENST00000489503 CCT6AP40227 531 aaKnown RBP13.7□□□□□ -0.22
SMARCD3-213ENST00000489503 GPC3P51654 580 aa13.7□□□□□ -0.22
SMARCD3-213ENST00000489503 ZNF697Q5TEC3 545 aa13.7□□□□□ -0.22
SMARCD3-213ENST00000489503 SPRED2Q7Z698 418 aa13.7□□□□□ -0.22
SMARCD3-213ENST00000489503 FAM228AQ86W67 206 aa13.7□□□□□ -0.22
SMARCD3-213ENST00000489503 NME8Q8N427 588 aa13.7□□□□□ -0.22
SMARCD3-213ENST00000489503 ERMNQ8TAM6 284 aa13.7□□□□□ -0.22
SMARCD3-213ENST00000489503 SNX29Q8TEQ0 813 aa13.7□□□□□ -0.22
SMARCD3-213ENST00000489503 CCDC43Q96MW1 224 aaKnown RBP13.7□□□□□ -0.22
SMARCD3-213ENST00000489503 ADAMTS10Q9H324 1103 aa13.7□□□□□ -0.22
SMARCD3-213ENST00000489503 TMX1Q9H3N1 280 aa13.7□□□□□ -0.22
SMARCD3-213ENST00000489503 XPNPEP1Q9NQW7 623 aa13.7□□□□□ -0.22
SMARCD3-213ENST00000489503 SUCLA2Q9P2R7 463 aaPredicted RBP13.7□□□□□ -0.22
SMARCD3-213ENST00000489503 LRWD1Q9UFC0 647 aa13.7□□□□□ -0.22
SMARCD3-213ENST00000489503 PADI3Q9ULW8 664 aa13.7□□□□□ -0.22
SMARCD3-213ENST00000489503 VWA3AA6NCI4 1184 aa13.69□□□□□ -0.22
SMARCD3-213ENST00000489503 MGEA5O60502 916 aa13.69□□□□□ -0.22
SMARCD3-213ENST00000489503 USO1O60763 962 aaKnown RBP13.69□□□□□ -0.22
SMARCD3-213ENST00000489503 RPS6KA5O75582 802 aa13.69□□□□□ -0.22
SMARCD3-213ENST00000489503 UPP2O95045 317 aa13.69□□□□□ -0.22
SMARCD3-213ENST00000489503 LYPLA2O95372 231 aa13.69□□□□□ -0.22
SMARCD3-213ENST00000489503 CA3P07451 260 aa13.69□□□□□ -0.22
SMARCD3-213ENST00000489503 RARRES1P49788 294 aa13.69□□□□□ -0.22
SMARCD3-213ENST00000489503 CEBPZQ03701 1054 aaKnown RBP13.69□□□□□ -0.22
SMARCD3-213ENST00000489503 GRIN1Q05586 938 aa13.69□□□□□ -0.22
SMARCD3-213ENST00000489503 NFX1Q12986 1120 aaKnown RBP13.69□□□□□ -0.22
SMARCD3-213ENST00000489503 PKP1Q13835 747 aa13.69□□□□□ -0.22
SMARCD3-213ENST00000489503 SF3A1Q15459 793 aaKnown RBP13.69□□□□□ -0.22
SMARCD3-213ENST00000489503 RAB30Q15771 203 aa13.69□□□□□ -0.22
SMARCD3-213ENST00000489503 DTHD1Q6ZMT9 781 aa13.69□□□□□ -0.22
SMARCD3-213ENST00000489503 RHPN2Q8IUC4 686 aa13.69□□□□□ -0.22
SMARCD3-213ENST00000489503 IGSF22Q8N9C0 903 aa13.69□□□□□ -0.22
SMARCD3-213ENST00000489503 NLRP7Q8WX94 980 aa13.69□□□□□ -0.22
SMARCD3-213ENST00000489503 SLC7A3Q8WY07 619 aa13.69□□□□□ -0.22
SMARCD3-213ENST00000489503 APBB2Q92870 758 aa13.69□□□□□ -0.22
SMARCD3-213ENST00000489503 NLRP4Q96MN2 994 aa13.69□□□□□ -0.22
SMARCD3-213ENST00000489503 POLR3CQ9BUI4 534 aaPredicted RBP13.69□□□□□ -0.22
SMARCD3-213ENST00000489503 DHX33Q9H6R0 707 aaKnown RBP13.69□□□□□ -0.22
SMARCD3-213ENST00000489503 ERVK-5Q9HDB9 667 aa13.69□□□□□ -0.22
SMARCD3-213ENST00000489503 TUFT1Q9NNX1 390 aa13.69□□□□□ -0.22
SMARCD3-213ENST00000489503 MSRAQ9UJ68 235 aa13.69□□□□□ -0.22
SMARCD3-213ENST00000489503 CLIC4Q9Y696 253 aa13.69□□□□□ -0.22
SMARCD3-213ENST00000489503 CHD9Q3L8U1 2897 aa13.68□□□□□ -0.22
SMARCD3-213ENST00000489503 A0A087WZ62 844 aa13.68□□□□□ -0.22
SMARCD3-213ENST00000489503 LAD1O00515 517 aa13.68□□□□□ -0.22
SMARCD3-213ENST00000489503 TLL1O43897 1013 aa13.68□□□□□ -0.22
SMARCD3-213ENST00000489503 EFCAB14O75071 495 aa13.68□□□□□ -0.22
SMARCD3-213ENST00000489503 AMHP03971 560 aa13.68□□□□□ -0.22
SMARCD3-213ENST00000489503 RPA1P27694 616 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms