RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 TUBE1Q9UJT0 475 aa15.84■□□□□ 0.13
CLDN11-209ENST00000489485 KLRC1P26715 233 aa15.84■□□□□ 0.13
CLDN11-209ENST00000489485 SLC12A3P55017 1021 aa15.84■□□□□ 0.13
CLDN11-209ENST00000489485 ZNF200P98182 395 aaPredicted RBP15.84■□□□□ 0.13
CLDN11-209ENST00000489485 HIC1Q14526 733 aa15.84■□□□□ 0.13
CLDN11-209ENST00000489485 MARCH8Q5T0T0 291 aa15.84■□□□□ 0.13
CLDN11-209ENST00000489485 CCDC183Q5T5S1 534 aa15.84■□□□□ 0.13
CLDN11-209ENST00000489485 GDF6Q6KF10 455 aaPredicted RBP15.84■□□□□ 0.13
CLDN11-209ENST00000489485 SLC39A5Q6ZMH5 540 aa15.84■□□□□ 0.13
CLDN11-209ENST00000489485 METTL13Q8N6R0 699 aa15.84■□□□□ 0.13
CLDN11-209ENST00000489485 PAGE5Q96GU1 130 aa15.84■□□□□ 0.13
CLDN11-209ENST00000489485 MTRQ99707 1265 aa15.84■□□□□ 0.13
CLDN11-209ENST00000489485 SUGCTQ9HAC7 445 aa15.84■□□□□ 0.13
CLDN11-209ENST00000489485 USP25Q9UHP3 1055 aa15.84■□□□□ 0.13
CLDN11-209ENST00000489485 NOD1Q9Y239 953 aa15.84■□□□□ 0.13
CLDN11-209ENST00000489485 TREHO43280 583 aa15.83■□□□□ 0.12
CLDN11-209ENST00000489485 DGAT1O75907 488 aa15.83■□□□□ 0.12
CLDN11-209ENST00000489485 RAD51AP2Q09MP3 1159 aa15.83■□□□□ 0.12
CLDN11-209ENST00000489485 PTGISQ16647 500 aa15.83■□□□□ 0.12
CLDN11-209ENST00000489485 KANK3Q6NY19 840 aa15.83■□□□□ 0.12
CLDN11-209ENST00000489485 MAEAQ7L5Y9 396 aa15.83■□□□□ 0.12
CLDN11-209ENST00000489485 SESTD1Q86VW0 696 aa15.83■□□□□ 0.12
CLDN11-209ENST00000489485 GPBP1Q86WP2 473 aa15.83■□□□□ 0.12
CLDN11-209ENST00000489485 TRMT13Q9NUP7 481 aaKnown RBP15.83■□□□□ 0.12
CLDN11-209ENST00000489485 C22orf31O95567 290 aa15.82■□□□□ 0.12
CLDN11-209ENST00000489485 CASP1P29466 404 aa15.82■□□□□ 0.12
CLDN11-209ENST00000489485 RFC5P40937 340 aa15.82■□□□□ 0.12
CLDN11-209ENST00000489485 PTPN11Q06124 597 aaPredicted RBP15.82■□□□□ 0.12
CLDN11-209ENST00000489485 PNOCQ13519 176 aa15.82■□□□□ 0.12
CLDN11-209ENST00000489485 RINT1Q6NUQ1 792 aa15.82■□□□□ 0.12
CLDN11-209ENST00000489485 EFCAB12Q6NXP0 572 aa15.82■□□□□ 0.12
CLDN11-209ENST00000489485 MTHFD1LQ6UB35 978 aa15.82■□□□□ 0.12
CLDN11-209ENST00000489485 SLC43A3Q8NBI5 491 aa15.82■□□□□ 0.12
CLDN11-209ENST00000489485 RETREG2Q8NC44 543 aa15.82■□□□□ 0.12
CLDN11-209ENST00000489485 CCDC34Q96HJ3 373 aa15.82■□□□□ 0.12
CLDN11-209ENST00000489485 CEP89Q96ST8 783 aa15.82■□□□□ 0.12
CLDN11-209ENST00000489485 RUSC1Q9BVN2 902 aa15.82■□□□□ 0.12
CLDN11-209ENST00000489485 SEZ6LQ9BYH1 1024 aa15.82■□□□□ 0.12
CLDN11-209ENST00000489485 DHX33Q9H6R0 707 aaKnown RBP15.82■□□□□ 0.12
CLDN11-209ENST00000489485 KBTBD4Q9NVX7 518 aa15.82■□□□□ 0.12
CLDN11-209ENST00000489485 PPME1Q9Y570 386 aa15.82■□□□□ 0.12
CLDN11-209ENST00000489485 MAGEB2O15479 319 aa15.82■□□□□ 0.12
CLDN11-209ENST00000489485 PQBP1O60828 265 aaKnown RBP15.82■□□□□ 0.12
CLDN11-209ENST00000489485 MAFO75444 373 aaPredicted RBP15.82■□□□□ 0.12
CLDN11-209ENST00000489485 KRT18P05783 430 aaKnown RBP15.82■□□□□ 0.12
CLDN11-209ENST00000489485 HOXC8P31273 242 aa15.82■□□□□ 0.12
CLDN11-209ENST00000489485 ADAM17P78536 824 aa15.82■□□□□ 0.12
CLDN11-209ENST00000489485 MDM2Q00987 491 aaPredicted RBP15.82■□□□□ 0.12
CLDN11-209ENST00000489485 AMPD3Q01432 767 aa15.82■□□□□ 0.12
CLDN11-209ENST00000489485 EMC2Q15006 297 aa15.82■□□□□ 0.12
CLDN11-209ENST00000489485 POSTNQ15063 836 aa15.82■□□□□ 0.12
CLDN11-209ENST00000489485 DYMQ7RTS9 669 aa15.82■□□□□ 0.12
CLDN11-209ENST00000489485 EXOC8Q8IYI6 725 aa15.82■□□□□ 0.12
CLDN11-209ENST00000489485 LRRC71Q8N4P6 559 aa15.82■□□□□ 0.12
CLDN11-209ENST00000489485 TRPV6Q9H1D0 765 aa15.82■□□□□ 0.12
CLDN11-209ENST00000489485 ATP6V0A4Q9HBG4 840 aa15.82■□□□□ 0.12
CLDN11-209ENST00000489485 POLD4Q9HCU8 107 aa15.82■□□□□ 0.12
CLDN11-209ENST00000489485 B4GALT4O60513 344 aa15.81■□□□□ 0.12
CLDN11-209ENST00000489485 PRR29P0C7W0 189 aa15.81■□□□□ 0.12
CLDN11-209ENST00000489485 CYP2C9P11712 490 aa15.81■□□□□ 0.12
CLDN11-209ENST00000489485 CYP11B2P19099 503 aa15.81■□□□□ 0.12
CLDN11-209ENST00000489485 CDK7P50613 346 aa15.81■□□□□ 0.12
CLDN11-209ENST00000489485 C1orf186Q6ZWK4 172 aa15.81■□□□□ 0.12
CLDN11-209ENST00000489485 SH3RF1Q7Z6J0 888 aa15.81■□□□□ 0.12
CLDN11-209ENST00000489485 JPH2Q9BR39 696 aaPredicted RBP15.81■□□□□ 0.12
CLDN11-209ENST00000489485 BLZF1Q9H2G9 400 aa15.81■□□□□ 0.12
CLDN11-209ENST00000489485 MAGEF1Q9HAY2 307 aa15.81■□□□□ 0.12
CLDN11-209ENST00000489485 KCND2Q9NZV8 630 aa15.81■□□□□ 0.12
CLDN11-209ENST00000489485 HOOK1Q9UJC3 728 aaKnown RBP15.81■□□□□ 0.12
CLDN11-209ENST00000489485 MROH7Q68CQ1 1323 aa15.81■□□□□ 0.12
CLDN11-209ENST00000489485 MYH11P35749 1972 aa15.81■□□□□ 0.12
CLDN11-209ENST00000489485 NPHP3-ACAD11A0A0J9YXS1 232 aa15.8■□□□□ 0.12
CLDN11-209ENST00000489485 MBLAC1A4D2B0 266 aaPredicted RBP15.8■□□□□ 0.12
CLDN11-209ENST00000489485 TMOD1P28289 359 aa15.8■□□□□ 0.12
CLDN11-209ENST00000489485 DNM2P50570 870 aa15.8■□□□□ 0.12
CLDN11-209ENST00000489485 CLCN3P51790 818 aa15.8■□□□□ 0.12
CLDN11-209ENST00000489485 CACNB1Q02641 598 aaPredicted RBP15.8■□□□□ 0.12
CLDN11-209ENST00000489485 CUL4BQ13620 913 aa15.8■□□□□ 0.12
CLDN11-209ENST00000489485 ZSCAN23Q3MJ62 389 aa15.8■□□□□ 0.12
CLDN11-209ENST00000489485 TRIM60Q495X7 471 aa15.8■□□□□ 0.12
CLDN11-209ENST00000489485 ARSHQ5FYA8 562 aa15.8■□□□□ 0.12
CLDN11-209ENST00000489485 FAM102BQ5T8I3 360 aa15.8■□□□□ 0.12
CLDN11-209ENST00000489485 MCPH1Q8NEM0 835 aa15.8■□□□□ 0.12
CLDN11-209ENST00000489485 DDX12PQ92771 950 aa15.8■□□□□ 0.12
CLDN11-209ENST00000489485 TMEM143Q96AN5 459 aa15.8■□□□□ 0.12
CLDN11-209ENST00000489485 LRRC27Q9C0I9 530 aa15.8■□□□□ 0.12
CLDN11-209ENST00000489485 FAM49AQ9H0Q0 323 aaPredicted RBP15.8■□□□□ 0.12
CLDN11-209ENST00000489485 XPNPEP1Q9NQW7 623 aa15.8■□□□□ 0.12
CLDN11-209ENST00000489485 ATP11BQ9Y2G3 1177 aa15.8■□□□□ 0.12
CLDN11-209ENST00000489485 MYMKA6NI61 221 aa15.8■□□□□ 0.12
CLDN11-209ENST00000489485 DRP2Q13474 957 aa15.8■□□□□ 0.12
CLDN11-209ENST00000489485 RUFY4Q6ZNE9 571 aa15.8■□□□□ 0.12
CLDN11-209ENST00000489485 UBE2Q1Q7Z7E8 422 aa15.8■□□□□ 0.12
CLDN11-209ENST00000489485 FAM126BQ8IXS8 530 aa15.8■□□□□ 0.12
CLDN11-209ENST00000489485 ELOA2Q8IYF1 753 aaPredicted RBP15.8■□□□□ 0.12
CLDN11-209ENST00000489485 GPRC5CQ9NQ84 441 aa15.8■□□□□ 0.12
CLDN11-209ENST00000489485 PCDHA2Q9Y5H9 948 aa15.8■□□□□ 0.12
CLDN11-209ENST00000489485 IGKV6-21A0A0C4DH24 114 aa15.79■□□□□ 0.12
CLDN11-209ENST00000489485 SYCE3A1L190 88 aa15.79■□□□□ 0.12
CLDN11-209ENST00000489485 DCDC2CA8MYV0 355 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms