RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 RAD9AQ99638 391 aa14.99□□□□□ -0.01
CCL28-202ENST00000489442 EIF2AK1Q9BQI3 630 aaKnown RBP14.99□□□□□ -0.01
CCL28-202ENST00000489442 JPH2Q9BR39 696 aaPredicted RBP14.99□□□□□ -0.01
CCL28-202ENST00000489442 TMEM60Q9H2L4 133 aa14.99□□□□□ -0.01
CCL28-202ENST00000489442 ZSWIM4Q9H7M6 989 aa14.99□□□□□ -0.01
CCL28-202ENST00000489442 CDH23Q9H251 3354 aa14.99□□□□□ -0.01
CCL28-202ENST00000489442 KDM3AQ9Y4C1 1321 aa14.99□□□□□ -0.01
CCL28-202ENST00000489442 RPS6KA5O75582 802 aa14.98□□□□□ -0.01
CCL28-202ENST00000489442 GJB5O95377 273 aa14.98□□□□□ -0.01
CCL28-202ENST00000489442 OR52Z1P0C646 297 aa14.98□□□□□ -0.01
CCL28-202ENST00000489442 CRYBB1P53674 252 aaPredicted RBP14.98□□□□□ -0.01
CCL28-202ENST00000489442 NLRP11P59045 1033 aaKnown RBP14.98□□□□□ -0.01
CCL28-202ENST00000489442 GRIN2CQ14957 1233 aa14.98□□□□□ -0.01
CCL28-202ENST00000489442 TARBP2Q15633 366 aaKnown RBP14.98□□□□□ -0.01
CCL28-202ENST00000489442 TMEM266Q2M3C6 531 aa14.98□□□□□ -0.01
CCL28-202ENST00000489442 PLA2G4FQ68DD2 849 aa14.98□□□□□ -0.01
CCL28-202ENST00000489442 ANO5Q75V66 913 aa14.98□□□□□ -0.01
CCL28-202ENST00000489442 C4orf19Q8IY42 314 aa14.98□□□□□ -0.01
CCL28-202ENST00000489442 EXOC8Q8IYI6 725 aa14.98□□□□□ -0.01
CCL28-202ENST00000489442 ZNF710Q8N1W2 664 aa14.98□□□□□ -0.01
CCL28-202ENST00000489442 CEP170P1Q96L14 293 aa14.98□□□□□ -0.01
CCL28-202ENST00000489442 CCDC43Q96MW1 224 aaKnown RBP14.98□□□□□ -0.01
CCL28-202ENST00000489442 FTHL17Q9BXU8 183 aa14.98□□□□□ -0.01
CCL28-202ENST00000489442 AGO3Q9H9G7 860 aaKnown RBP14.98□□□□□ -0.01
CCL28-202ENST00000489442 PADI3Q9ULW8 664 aa14.98□□□□□ -0.01
CCL28-202ENST00000489442 STXBP5LQ9Y2K9 1186 aa14.98□□□□□ -0.01
CCL28-202ENST00000489442 COL6A3P12111 3177 aa14.98□□□□□ -0.01
CCL28-202ENST00000489442 CHD7Q9P2D1 2997 aa14.97□□□□□ -0.01
CCL28-202ENST00000489442 GPR182O15218 404 aa14.97□□□□□ -0.01
CCL28-202ENST00000489442 STBD1O95210 358 aa14.97□□□□□ -0.01
CCL28-202ENST00000489442 YWHABP31946 246 aaKnown RBP14.97□□□□□ -0.01
CCL28-202ENST00000489442 TECP42680 631 aa14.97□□□□□ -0.01
CCL28-202ENST00000489442 NPEPPSP55786 919 aa14.97□□□□□ -0.01
CCL28-202ENST00000489442 XKR9Q5GH70 373 aa14.97□□□□□ -0.01
CCL28-202ENST00000489442 NEK9Q8TD19 979 aa14.97□□□□□ -0.01
CCL28-202ENST00000489442 SLC7A3Q8WY07 619 aa14.97□□□□□ -0.01
CCL28-202ENST00000489442 MYLIPQ8WY64 445 aa14.97□□□□□ -0.01
CCL28-202ENST00000489442 GAS2L1Q99501 681 aaPredicted RBP14.97□□□□□ -0.01
CCL28-202ENST00000489442 OSMRQ99650 979 aa14.97□□□□□ -0.01
CCL28-202ENST00000489442 PRDM12Q9H4Q4 367 aa14.97□□□□□ -0.01
CCL28-202ENST00000489442 CDHR5Q9HBB8 845 aa14.97□□□□□ -0.01
CCL28-202ENST00000489442 CYP26B1Q9NR63 512 aa14.97□□□□□ -0.01
CCL28-202ENST00000489442 INSL6Q9Y581 213 aa14.97□□□□□ -0.01
CCL28-202ENST00000489442 TTC3P53804 2025 aa14.97□□□□□ -0.01
CCL28-202ENST00000489442 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.96□□□□□ -0.01
CCL28-202ENST00000489442 POTEMA6NI47 508 aa14.96□□□□□ -0.01
CCL28-202ENST00000489442 ENPP3O14638 875 aa14.96□□□□□ -0.01
CCL28-202ENST00000489442 MAFO75444 373 aaPredicted RBP14.96□□□□□ -0.01
CCL28-202ENST00000489442 SLITRK3O94933 977 aa14.96□□□□□ -0.01
CCL28-202ENST00000489442 FOSL2P15408 326 aa14.96□□□□□ -0.01
CCL28-202ENST00000489442 PDCP20941 246 aa14.96□□□□□ -0.01
CCL28-202ENST00000489442 POLGP54098 1239 aaPredicted RBP14.96□□□□□ -0.01
CCL28-202ENST00000489442 CDC42EP1Q00587 391 aa14.96□□□□□ -0.01
CCL28-202ENST00000489442 CUL4AQ13619 759 aa14.96□□□□□ -0.01
CCL28-202ENST00000489442 NBR1Q14596 966 aa14.96□□□□□ -0.01
CCL28-202ENST00000489442 RILPL1Q5EBL4 403 aa14.96□□□□□ -0.01
CCL28-202ENST00000489442 ERMNQ8TAM6 284 aa14.96□□□□□ -0.01
CCL28-202ENST00000489442 NLRP7Q8WX94 980 aa14.96□□□□□ -0.01
CCL28-202ENST00000489442 TOP1MTQ969P6 601 aa14.96□□□□□ -0.01
CCL28-202ENST00000489442 YME1L1Q96TA2 773 aa14.96□□□□□ -0.01
CCL28-202ENST00000489442 SUCLA2Q9P2R7 463 aaPredicted RBP14.96□□□□□ -0.01
CCL28-202ENST00000489442 WRAP73Q9P2S5 460 aaPredicted RBP14.96□□□□□ -0.01
CCL28-202ENST00000489442 ST3GAL5Q9UNP4 418 aa14.96□□□□□ -0.01
CCL28-202ENST00000489442 NOC2LQ9Y3T9 749 aaKnown RBP14.96□□□□□ -0.01
CCL28-202ENST00000489442 PPME1Q9Y570 386 aa14.96□□□□□ -0.01
CCL28-202ENST00000489442 TRANK1O15050 2925 aa14.96□□□□□ -0.01
CCL28-202ENST00000489442 DENND3A2RUS2 1198 aa14.95□□□□□ -0.02
CCL28-202ENST00000489442 GPR32O75388 356 aa14.95□□□□□ -0.02
CCL28-202ENST00000489442 IBSPP21815 317 aaPredicted RBP14.95□□□□□ -0.02
CCL28-202ENST00000489442 RFC5P40937 340 aa14.95□□□□□ -0.02
CCL28-202ENST00000489442 TOB1P50616 345 aaPredicted RBP14.95□□□□□ -0.02
CCL28-202ENST00000489442 PTGDRQ13258 359 aa14.95□□□□□ -0.02
CCL28-202ENST00000489442 MKRN4PQ13434 485 aaPredicted RBP14.95□□□□□ -0.02
CCL28-202ENST00000489442 LINC01465Q8N7H1 131 aa14.95□□□□□ -0.02
CCL28-202ENST00000489442 TMEM40Q8WWA1 233 aa14.95□□□□□ -0.02
CCL28-202ENST00000489442 ZNF668Q96K58 619 aaPredicted RBP14.95□□□□□ -0.02
CCL28-202ENST00000489442 HSD17B14Q9BPX1 270 aa14.95□□□□□ -0.02
CCL28-202ENST00000489442 RAB34Q9BZG1 259 aa14.95□□□□□ -0.02
CCL28-202ENST00000489442 CERS4Q9HA82 394 aa14.95□□□□□ -0.02
CCL28-202ENST00000489442 PCDHB6Q9Y5E3 794 aa14.95□□□□□ -0.02
CCL28-202ENST00000489442 ARID2Q68CP9 1835 aa14.94□□□□□ -0.02
CCL28-202ENST00000489442 LCHNA4D1U4 455 aa14.94□□□□□ -0.02
CCL28-202ENST00000489442 VPS37CA5D8V6 355 aaPredicted RBP14.94□□□□□ -0.02
CCL28-202ENST00000489442 K7ELQ4 463 aaPredicted RBP14.94□□□□□ -0.02
CCL28-202ENST00000489442 ZBTB39O15060 712 aa14.94□□□□□ -0.02
CCL28-202ENST00000489442 GPC3P51654 580 aa14.94□□□□□ -0.02
CCL28-202ENST00000489442 FAM43BQ6ZT52 329 aaPredicted RBP14.94□□□□□ -0.02
CCL28-202ENST00000489442 RHPN2Q8IUC4 686 aa14.94□□□□□ -0.02
CCL28-202ENST00000489442 ARNTL2Q8WYA1 636 aa14.94□□□□□ -0.02
CCL28-202ENST00000489442 CEP89Q96ST8 783 aa14.94□□□□□ -0.02
CCL28-202ENST00000489442 ADAMTS10Q9H324 1103 aa14.94□□□□□ -0.02
CCL28-202ENST00000489442 ERVK-5Q9HDB9 667 aa14.94□□□□□ -0.02
CCL28-202ENST00000489442 BMP2KQ9NSY1 1161 aaPredicted RBP14.94□□□□□ -0.02
CCL28-202ENST00000489442 LRFN2Q9ULH4 789 aa14.94□□□□□ -0.02
CCL28-202ENST00000489442 IGKV6-21A0A0C4DH24 114 aa14.93□□□□□ -0.02
CCL28-202ENST00000489442 LAD1O00515 517 aa14.93□□□□□ -0.02
CCL28-202ENST00000489442 LYPLA2O95372 231 aa14.93□□□□□ -0.02
CCL28-202ENST00000489442 STAG3L1P0CL83 205 aa14.93□□□□□ -0.02
CCL28-202ENST00000489442 IGFBP4P22692 258 aa14.93□□□□□ -0.02
CCL28-202ENST00000489442 EIF4BP23588 611 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms