RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 TOMM22Q9NS69 142 aa5.36□□□□□ -1.55
RFC4-213ENST00000489028 ZKSCAN5Q9Y2L8 839 aa5.36□□□□□ -1.55
RFC4-213ENST00000489028 NPEPPSL1A6NEC2 478 aa5.35□□□□□ -1.55
RFC4-213ENST00000489028 PDE8AO60658 829 aa5.35□□□□□ -1.55
RFC4-213ENST00000489028 GAS7O60861 476 aa5.35□□□□□ -1.55
RFC4-213ENST00000489028 MYCLP1P12525 358 aaPredicted RBP5.35□□□□□ -1.55
RFC4-213ENST00000489028 ADCYAP1R1P41586 468 aa5.35□□□□□ -1.55
RFC4-213ENST00000489028 ANTXR2P58335 489 aa5.35□□□□□ -1.55
RFC4-213ENST00000489028 ROM1Q03395 351 aa5.35□□□□□ -1.55
RFC4-213ENST00000489028 ICAM4Q14773 271 aa5.35□□□□□ -1.55
RFC4-213ENST00000489028 TTC38Q5R3I4 469 aa5.35□□□□□ -1.55
RFC4-213ENST00000489028 ERICH6BQ5W0A0 696 aa5.35□□□□□ -1.55
RFC4-213ENST00000489028 SLFN13Q68D06 897 aa5.35□□□□□ -1.55
RFC4-213ENST00000489028 SLFN12LQ6IEE8 588 aa5.35□□□□□ -1.55
RFC4-213ENST00000489028 GLB1LQ6UWU2 654 aa5.35□□□□□ -1.55
RFC4-213ENST00000489028 IFNL2Q8IZJ0 200 aa5.35□□□□□ -1.55
RFC4-213ENST00000489028 EFHBQ8N7U6 833 aa5.35□□□□□ -1.55
RFC4-213ENST00000489028 WDR48Q8TAF3 677 aa5.35□□□□□ -1.55
RFC4-213ENST00000489028 CFHR4Q92496 578 aa5.35□□□□□ -1.55
RFC4-213ENST00000489028 RTF1Q92541 710 aaKnown RBP5.35□□□□□ -1.55
RFC4-213ENST00000489028 NEIL1Q96FI4 390 aaPredicted RBP5.35□□□□□ -1.55
RFC4-213ENST00000489028 GPR101Q96P66 508 aaPredicted RBP5.35□□□□□ -1.55
RFC4-213ENST00000489028 LRRC37BQ96QE4 947 aa5.35□□□□□ -1.55
RFC4-213ENST00000489028 SEMA4AQ9H3S1 761 aa5.35□□□□□ -1.55
RFC4-213ENST00000489028 SEC61A2Q9H9S3 476 aa5.35□□□□□ -1.55
RFC4-213ENST00000489028 JADE2Q9NQC1 790 aa5.35□□□□□ -1.55
RFC4-213ENST00000489028 SPTLC3Q9NUV7 552 aa5.35□□□□□ -1.55
RFC4-213ENST00000489028 CNOT11Q9UKZ1 510 aaKnown RBP5.35□□□□□ -1.55
RFC4-213ENST00000489028 TMA7Q9Y2S6 64 aaKnown RBP5.35□□□□□ -1.55
RFC4-213ENST00000489028 LCHNA4D1U4 455 aa5.34□□□□□ -1.55
RFC4-213ENST00000489028 MRE11P49959 708 aa5.34□□□□□ -1.55
RFC4-213ENST00000489028 SMAD3P84022 425 aaKnown RBP5.34□□□□□ -1.55
RFC4-213ENST00000489028 AGBL4Q5VU57 503 aa5.34□□□□□ -1.55
RFC4-213ENST00000489028 PRAMEF9Q5VWM5 478 aa5.34□□□□□ -1.55
RFC4-213ENST00000489028 THNSL2Q86YJ6 484 aa5.34□□□□□ -1.55
RFC4-213ENST00000489028 DNERQ8NFT8 737 aa5.34□□□□□ -1.55
RFC4-213ENST00000489028 OR5AN1Q8NGI8 311 aa5.34□□□□□ -1.55
RFC4-213ENST00000489028 LEO1Q8WVC0 666 aaPredicted RBP5.34□□□□□ -1.55
RFC4-213ENST00000489028 E2F7Q96AV8 911 aa5.34□□□□□ -1.55
RFC4-213ENST00000489028 LOXL4Q96JB6 756 aa5.34□□□□□ -1.55
RFC4-213ENST00000489028 SCYL1Q96KG9 808 aa5.34□□□□□ -1.55
RFC4-213ENST00000489028 TUBGCP5Q96RT8 1024 aa5.34□□□□□ -1.55
RFC4-213ENST00000489028 LMF1Q96S06 567 aa5.34□□□□□ -1.55
RFC4-213ENST00000489028 POFUT1Q9H488 388 aa5.34□□□□□ -1.55
RFC4-213ENST00000489028 CD248Q9HCU0 757 aa5.34□□□□□ -1.55
RFC4-213ENST00000489028 IFT57Q9NWB7 429 aa5.34□□□□□ -1.55
RFC4-213ENST00000489028 ST6GALNAC2Q9UJ37 374 aa5.34□□□□□ -1.55
RFC4-213ENST00000489028 HSD3B2P26439 372 aa5.33□□□□□ -1.56
RFC4-213ENST00000489028 MAGEA10P43363 369 aaPredicted RBP5.33□□□□□ -1.56
RFC4-213ENST00000489028 DUSP8Q13202 625 aa5.33□□□□□ -1.56
RFC4-213ENST00000489028 NFYCQ13952 458 aa5.33□□□□□ -1.56
RFC4-213ENST00000489028 SPATS1Q496A3 300 aa5.33□□□□□ -1.56
RFC4-213ENST00000489028 ZMAT1Q5H9K5 638 aa5.33□□□□□ -1.56
RFC4-213ENST00000489028 UNQ6494/PRO21346Q6UXR6 183 aa5.33□□□□□ -1.56
RFC4-213ENST00000489028 KANSL1Q7Z3B3 1105 aa5.33□□□□□ -1.56
RFC4-213ENST00000489028 RNF180Q86T96 592 aa5.33□□□□□ -1.56
RFC4-213ENST00000489028 CIR1Q86X95 450 aaPredicted RBP5.33□□□□□ -1.56
RFC4-213ENST00000489028 AHI1Q8N157 1196 aa5.33□□□□□ -1.56
RFC4-213ENST00000489028 C8orf49Q96NF6 230 aa5.33□□□□□ -1.56
RFC4-213ENST00000489028 WWC2-AS2Q96NR7 200 aa5.33□□□□□ -1.56
RFC4-213ENST00000489028 SAMD11Q96NU1 681 aa5.33□□□□□ -1.56
RFC4-213ENST00000489028 DPYSL5Q9BPU6 564 aa5.33□□□□□ -1.56
RFC4-213ENST00000489028 MYL10Q9BUA6 226 aa5.33□□□□□ -1.56
RFC4-213ENST00000489028 KRTAP17-1Q9BYP8 105 aa5.33□□□□□ -1.56
RFC4-213ENST00000489028 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.33□□□□□ -1.56
RFC4-213ENST00000489028 SMPD4Q9NXE4 827 aa5.33□□□□□ -1.56
RFC4-213ENST00000489028 PATE3B3GLJ2 98 aa5.32□□□□□ -1.56
RFC4-213ENST00000489028 ELL2O00472 640 aaPredicted RBP5.32□□□□□ -1.56
RFC4-213ENST00000489028 ARHGAP6O43182 974 aa5.32□□□□□ -1.56
RFC4-213ENST00000489028 FOXS1O43638 330 aa5.32□□□□□ -1.56
RFC4-213ENST00000489028 LSSP48449 732 aa5.32□□□□□ -1.56
RFC4-213ENST00000489028 SCNN1BP51168 640 aa5.32□□□□□ -1.56
RFC4-213ENST00000489028 KPNA1P52294 538 aaPredicted RBP5.32□□□□□ -1.56
RFC4-213ENST00000489028 ADAM17P78536 824 aa5.32□□□□□ -1.56
RFC4-213ENST00000489028 HGFACQ04756 655 aa5.32□□□□□ -1.56
RFC4-213ENST00000489028 TCTN3Q6NUS6 607 aa5.32□□□□□ -1.56
RFC4-213ENST00000489028 STRA8Q7Z7C7 330 aa5.32□□□□□ -1.56
RFC4-213ENST00000489028 NME9Q86XW9 330 aa5.32□□□□□ -1.56
RFC4-213ENST00000489028 RTKN2Q8IZC4 609 aa5.32□□□□□ -1.56
RFC4-213ENST00000489028 TTC9BQ8N6N2 239 aa5.32□□□□□ -1.56
RFC4-213ENST00000489028 UBR7Q8N806 425 aa5.32□□□□□ -1.56
RFC4-213ENST00000489028 OR14K1Q8NGZ2 314 aa5.32□□□□□ -1.56
RFC4-213ENST00000489028 OR2W6PQ8NHA6 318 aa5.32□□□□□ -1.56
RFC4-213ENST00000489028 ZNF496Q96IT1 587 aaPredicted RBP5.32□□□□□ -1.56
RFC4-213ENST00000489028 OR10A2Q9H208 303 aa5.32□□□□□ -1.56
RFC4-213ENST00000489028 OAZ3Q9UMX2 235 aa5.32□□□□□ -1.56
RFC4-213ENST00000489028 MAPRE3Q9UPY8 281 aa5.32□□□□□ -1.56
RFC4-213ENST00000489028 NR2E1Q9Y466 385 aa5.32□□□□□ -1.56
RFC4-213ENST00000489028 PRPF6O94906 941 aaKnown RBP5.31□□□□□ -1.56
RFC4-213ENST00000489028 FKBP9O95302 570 aa5.31□□□□□ -1.56
RFC4-213ENST00000489028 ID4P47928 161 aa5.31□□□□□ -1.56
RFC4-213ENST00000489028 MEOX1P50221 254 aa5.31□□□□□ -1.56
RFC4-213ENST00000489028 IL2P60568 153 aa5.31□□□□□ -1.56
RFC4-213ENST00000489028 RAC3P60763 192 aa5.31□□□□□ -1.56
RFC4-213ENST00000489028 ADCY1Q08828 1119 aa5.31□□□□□ -1.56
RFC4-213ENST00000489028 MAP3K12Q12852 859 aa5.31□□□□□ -1.56
RFC4-213ENST00000489028 ADAM15Q13444 863 aa5.31□□□□□ -1.56
RFC4-213ENST00000489028 LRRC32Q14392 662 aa5.31□□□□□ -1.56
RFC4-213ENST00000489028 ACAP1Q15027 740 aa5.31□□□□□ -1.56
RFC4-213ENST00000489028 ZBTB41Q5SVQ8 909 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms