RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 LRRC71Q8N4P6 559 aa13.69□□□□□ -0.22
TRAIP-209ENST00000488860 PAGE5Q96GU1 130 aa13.69□□□□□ -0.22
TRAIP-209ENST00000488860 ABHD8Q96I13 439 aa13.69□□□□□ -0.22
TRAIP-209ENST00000488860 LRRC27Q9C0I9 530 aa13.69□□□□□ -0.22
TRAIP-209ENST00000488860 NUP62CLQ9H1M0 184 aa13.69□□□□□ -0.22
TRAIP-209ENST00000488860 BLZF1Q9H2G9 400 aa13.69□□□□□ -0.22
TRAIP-209ENST00000488860 ZHX3Q9H4I2 956 aa13.69□□□□□ -0.22
TRAIP-209ENST00000488860 C11orf49Q9H6J7 331 aa13.69□□□□□ -0.22
TRAIP-209ENST00000488860 GTF2IRD1Q9UHL9 959 aa13.69□□□□□ -0.22
TRAIP-209ENST00000488860 TANC1Q9C0D5 1861 aa13.69□□□□□ -0.22
TRAIP-209ENST00000488860 GRIN2DO15399 1336 aa13.68□□□□□ -0.22
TRAIP-209ENST00000488860 TBCAO75347 108 aaKnown RBP13.68□□□□□ -0.22
TRAIP-209ENST00000488860 DGAT1O75907 488 aa13.68□□□□□ -0.22
TRAIP-209ENST00000488860 C22orf31O95567 290 aa13.68□□□□□ -0.22
TRAIP-209ENST00000488860 GNAT1P11488 350 aa13.68□□□□□ -0.22
TRAIP-209ENST00000488860 KLRC1P26715 233 aa13.68□□□□□ -0.22
TRAIP-209ENST00000488860 CLCN3P51790 818 aa13.68□□□□□ -0.22
TRAIP-209ENST00000488860 SOX10P56693 466 aa13.68□□□□□ -0.22
TRAIP-209ENST00000488860 AMPD3Q01432 767 aa13.68□□□□□ -0.22
TRAIP-209ENST00000488860 PNOCQ13519 176 aa13.68□□□□□ -0.22
TRAIP-209ENST00000488860 HIC1Q14526 733 aa13.68□□□□□ -0.22
TRAIP-209ENST00000488860 POSTNQ15063 836 aa13.68□□□□□ -0.22
TRAIP-209ENST00000488860 FAM102BQ5T8I3 360 aa13.68□□□□□ -0.22
TRAIP-209ENST00000488860 KANK3Q6NY19 840 aa13.68□□□□□ -0.22
TRAIP-209ENST00000488860 CAVIN1Q6NZI2 390 aaKnown RBP13.68□□□□□ -0.22
TRAIP-209ENST00000488860 MTHFD1LQ6UB35 978 aa13.68□□□□□ -0.22
TRAIP-209ENST00000488860 METTL13Q8N6R0 699 aa13.68□□□□□ -0.22
TRAIP-209ENST00000488860 RETREG2Q8NC44 543 aa13.68□□□□□ -0.22
TRAIP-209ENST00000488860 DDX12PQ92771 950 aa13.68□□□□□ -0.22
TRAIP-209ENST00000488860 PAWRQ96IZ0 340 aaKnown RBP13.68□□□□□ -0.22
TRAIP-209ENST00000488860 TIGD1Q96MW7 591 aa13.68□□□□□ -0.22
TRAIP-209ENST00000488860 REEP2Q9BRK0 252 aa13.68□□□□□ -0.22
TRAIP-209ENST00000488860 CLSTN2Q9H4D0 955 aa13.68□□□□□ -0.22
TRAIP-209ENST00000488860 SUGCTQ9HAC7 445 aa13.68□□□□□ -0.22
TRAIP-209ENST00000488860 POLD4Q9HCU8 107 aa13.68□□□□□ -0.22
TRAIP-209ENST00000488860 KBTBD4Q9NVX7 518 aa13.68□□□□□ -0.22
TRAIP-209ENST00000488860 HOOK1Q9UJC3 728 aaKnown RBP13.68□□□□□ -0.22
TRAIP-209ENST00000488860 NOD1Q9Y239 953 aa13.68□□□□□ -0.22
TRAIP-209ENST00000488860 PPME1Q9Y570 386 aa13.68□□□□□ -0.22
TRAIP-209ENST00000488860 CCDC85CA6NKD9 419 aa13.67□□□□□ -0.22
TRAIP-209ENST00000488860 ARVCFO00192 962 aa13.67□□□□□ -0.22
TRAIP-209ENST00000488860 TREHO43280 583 aa13.67□□□□□ -0.22
TRAIP-209ENST00000488860 GTPBP6O43824 516 aaPredicted RBP13.67□□□□□ -0.22
TRAIP-209ENST00000488860 HIP1RO75146 1068 aa13.67□□□□□ -0.22
TRAIP-209ENST00000488860 CYP2C9P11712 490 aa13.67□□□□□ -0.22
TRAIP-209ENST00000488860 IDEP14735 1019 aa13.67□□□□□ -0.22
TRAIP-209ENST00000488860 CUL4BQ13620 913 aa13.67□□□□□ -0.22
TRAIP-209ENST00000488860 PTGISQ16647 500 aa13.67□□□□□ -0.22
TRAIP-209ENST00000488860 ARSHQ5FYA8 562 aa13.67□□□□□ -0.22
TRAIP-209ENST00000488860 EFCAB12Q6NXP0 572 aa13.67□□□□□ -0.22
TRAIP-209ENST00000488860 RUFY4Q6ZNE9 571 aa13.67□□□□□ -0.22
TRAIP-209ENST00000488860 C1orf186Q6ZWK4 172 aa13.67□□□□□ -0.22
TRAIP-209ENST00000488860 NECAB2Q7Z6G3 386 aa13.67□□□□□ -0.22
TRAIP-209ENST00000488860 SESTD1Q86VW0 696 aa13.67□□□□□ -0.22
TRAIP-209ENST00000488860 TNS4Q8IZW8 715 aa13.67□□□□□ -0.22
TRAIP-209ENST00000488860 MCPH1Q8NEM0 835 aa13.67□□□□□ -0.22
TRAIP-209ENST00000488860 ERCC4Q92889 916 aaPredicted RBP13.67□□□□□ -0.22
TRAIP-209ENST00000488860 TMEM143Q96AN5 459 aa13.67□□□□□ -0.22
TRAIP-209ENST00000488860 CEP89Q96ST8 783 aa13.67□□□□□ -0.22
TRAIP-209ENST00000488860 JPH2Q9BR39 696 aaPredicted RBP13.67□□□□□ -0.22
TRAIP-209ENST00000488860 TRIM9Q9C026 710 aa13.67□□□□□ -0.22
TRAIP-209ENST00000488860 FAM49AQ9H0Q0 323 aaPredicted RBP13.67□□□□□ -0.22
TRAIP-209ENST00000488860 POLR3FQ9H1D9 316 aaPredicted RBP13.67□□□□□ -0.22
TRAIP-209ENST00000488860 DHX33Q9H6R0 707 aaKnown RBP13.67□□□□□ -0.22
TRAIP-209ENST00000488860 GPRC5CQ9NQ84 441 aa13.67□□□□□ -0.22
TRAIP-209ENST00000488860 XPNPEP1Q9NQW7 623 aa13.67□□□□□ -0.22
TRAIP-209ENST00000488860 TRMT13Q9NUP7 481 aaKnown RBP13.67□□□□□ -0.22
TRAIP-209ENST00000488860 KCND2Q9NZV8 630 aa13.67□□□□□ -0.22
TRAIP-209ENST00000488860 RSPH10B2B2RC85 870 aa13.66□□□□□ -0.22
TRAIP-209ENST00000488860 MAGEB2O15479 319 aa13.66□□□□□ -0.22
TRAIP-209ENST00000488860 TRAK2O60296 914 aa13.66□□□□□ -0.22
TRAIP-209ENST00000488860 PQBP1O60828 265 aaKnown RBP13.66□□□□□ -0.22
TRAIP-209ENST00000488860 MAFO75444 373 aaPredicted RBP13.66□□□□□ -0.22
TRAIP-209ENST00000488860 FAM13AO94988 1023 aa13.66□□□□□ -0.22
TRAIP-209ENST00000488860 RSPH10BP0C881 870 aa13.66□□□□□ -0.22
TRAIP-209ENST00000488860 CAPN2P17655 700 aa13.66□□□□□ -0.22
TRAIP-209ENST00000488860 GUCY2CP25092 1073 aa13.66□□□□□ -0.22
TRAIP-209ENST00000488860 PTPN11Q06124 597 aaPredicted RBP13.66□□□□□ -0.22
TRAIP-209ENST00000488860 DRP2Q13474 957 aa13.66□□□□□ -0.22
TRAIP-209ENST00000488860 KLHL40Q2TBA0 621 aa13.66□□□□□ -0.22
TRAIP-209ENST00000488860 MARCH8Q5T0T0 291 aa13.66□□□□□ -0.22
TRAIP-209ENST00000488860 CCDC183Q5T5S1 534 aa13.66□□□□□ -0.22
TRAIP-209ENST00000488860 SH3RF1Q7Z6J0 888 aa13.66□□□□□ -0.22
TRAIP-209ENST00000488860 EXOC8Q8IYI6 725 aa13.66□□□□□ -0.22
TRAIP-209ENST00000488860 SYAP1Q96A49 352 aaPredicted RBP13.66□□□□□ -0.22
TRAIP-209ENST00000488860 PPP1R16BQ96T49 567 aa13.66□□□□□ -0.22
TRAIP-209ENST00000488860 AKT3Q9Y243 479 aa13.66□□□□□ -0.22
TRAIP-209ENST00000488860 MBLAC1A4D2B0 266 aaPredicted RBP13.65□□□□□ -0.22
TRAIP-209ENST00000488860 GAS2O43903 313 aaKnown RBP13.65□□□□□ -0.22
TRAIP-209ENST00000488860 B4GALT4O60513 344 aa13.65□□□□□ -0.22
TRAIP-209ENST00000488860 COL6A1P12109 1028 aa13.65□□□□□ -0.22
TRAIP-209ENST00000488860 TMOD1P28289 359 aa13.65□□□□□ -0.22
TRAIP-209ENST00000488860 HOXC8P31273 242 aa13.65□□□□□ -0.22
TRAIP-209ENST00000488860 DNM2P50570 870 aa13.65□□□□□ -0.22
TRAIP-209ENST00000488860 GIT2Q14161 759 aa13.65□□□□□ -0.22
TRAIP-209ENST00000488860 SKOR2Q2VWA4 1001 aaPredicted RBP13.65□□□□□ -0.22
TRAIP-209ENST00000488860 TRIM60Q495X7 471 aa13.65□□□□□ -0.22
TRAIP-209ENST00000488860 SLC39A5Q6ZMH5 540 aa13.65□□□□□ -0.22
TRAIP-209ENST00000488860 CCDC65Q8IXS2 484 aa13.65□□□□□ -0.22
TRAIP-209ENST00000488860 TCP11Q8WWU5 503 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms