RNA–Protein interactions for RNA: ENST00000488828.1

NUP98-212, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-212ENST00000488828 MAP3K7O43318 606 aa12.36□□□□□ -0.43
NUP98-212ENST00000488828 ZNF862O60290 1169 aa12.36□□□□□ -0.43
NUP98-212ENST00000488828 CAND2O75155 1236 aa12.36□□□□□ -0.43
NUP98-212ENST00000488828 PFKMP08237 780 aa12.36□□□□□ -0.43
NUP98-212ENST00000488828 SYT1P21579 422 aa12.36□□□□□ -0.43
NUP98-212ENST00000488828 TMOD1P28289 359 aa12.36□□□□□ -0.43
NUP98-212ENST00000488828 TBC1D8BQ0IIM8 1120 aa12.36□□□□□ -0.43
NUP98-212ENST00000488828 PTGDRQ13258 359 aa12.36□□□□□ -0.43
NUP98-212ENST00000488828 ORC2Q13416 577 aaPredicted RBP12.36□□□□□ -0.43
NUP98-212ENST00000488828 TRIM71Q2Q1W2 868 aaKnown RBP12.36□□□□□ -0.43
NUP98-212ENST00000488828 XKR3Q5GH77 459 aa12.36□□□□□ -0.43
NUP98-212ENST00000488828 C6orf132Q5T0Z8 1188 aa12.36□□□□□ -0.43
NUP98-212ENST00000488828 OTUD6AQ7L8S5 288 aa12.36□□□□□ -0.43
NUP98-212ENST00000488828 ERMNQ8TAM6 284 aa12.36□□□□□ -0.43
NUP98-212ENST00000488828 DYDC2Q96IM9 177 aa12.36□□□□□ -0.43
NUP98-212ENST00000488828 CCDC43Q96MW1 224 aaKnown RBP12.36□□□□□ -0.43
NUP98-212ENST00000488828 MTMR9Q96QG7 549 aa12.36□□□□□ -0.43
NUP98-212ENST00000488828 SH2D3AQ9BRG2 576 aa12.36□□□□□ -0.43
NUP98-212ENST00000488828 RGL1Q9NZL6 768 aa12.36□□□□□ -0.43
NUP98-212ENST00000488828 SLC4A7Q9Y6M7 1214 aa12.36□□□□□ -0.43
NUP98-212ENST00000488828 COL1A2P08123 1366 aa12.35□□□□□ -0.43
NUP98-212ENST00000488828 SMIM35A0A1B0GVV1 85 aa12.35□□□□□ -0.43
NUP98-212ENST00000488828 MBLAC1A4D2B0 266 aaPredicted RBP12.35□□□□□ -0.43
NUP98-212ENST00000488828 TMEM150BA6NC51 233 aa12.35□□□□□ -0.43
NUP98-212ENST00000488828 NBNO60934 754 aa12.35□□□□□ -0.43
NUP98-212ENST00000488828 RPLP2P05387 115 aaKnown RBP12.35□□□□□ -0.43
NUP98-212ENST00000488828 KCNJ6P48051 423 aa12.35□□□□□ -0.43
NUP98-212ENST00000488828 DNM2P50570 870 aa12.35□□□□□ -0.43
NUP98-212ENST00000488828 TOB1P50616 345 aaPredicted RBP12.35□□□□□ -0.43
NUP98-212ENST00000488828 RBL2Q08999 1139 aa12.35□□□□□ -0.43
NUP98-212ENST00000488828 IKBKEQ14164 716 aa12.35□□□□□ -0.43
NUP98-212ENST00000488828 AMHR2Q16671 573 aa12.35□□□□□ -0.43
NUP98-212ENST00000488828 EFCAB12Q6NXP0 572 aa12.35□□□□□ -0.43
NUP98-212ENST00000488828 B3GNT9Q6UX72 402 aa12.35□□□□□ -0.43
NUP98-212ENST00000488828 NME8Q8N427 588 aa12.35□□□□□ -0.43
NUP98-212ENST00000488828 HERVK_113Q902F9 699 aa12.35□□□□□ -0.43
NUP98-212ENST00000488828 SEPT8Q92599 483 aa12.35□□□□□ -0.43
NUP98-212ENST00000488828 PPP1R16BQ96T49 567 aa12.35□□□□□ -0.43
NUP98-212ENST00000488828 EIF2AK1Q9BQI3 630 aaKnown RBP12.35□□□□□ -0.43
NUP98-212ENST00000488828 ZSWIM4Q9H7M6 989 aa12.35□□□□□ -0.43
NUP98-212ENST00000488828 TRIOBPQ9H2D6 2365 aa12.35□□□□□ -0.43
NUP98-212ENST00000488828 KAT6AQ92794 2004 aa12.35□□□□□ -0.43
NUP98-212ENST00000488828 IGSF9BQ9UPX0 1349 aa12.35□□□□□ -0.43
NUP98-212ENST00000488828 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.34□□□□□ -0.43
NUP98-212ENST00000488828 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.34□□□□□ -0.43
NUP98-212ENST00000488828 CHRNA1P02708 482 aa12.34□□□□□ -0.43
NUP98-212ENST00000488828 MRPS6P82932 125 aaKnown RBP12.34□□□□□ -0.43
NUP98-212ENST00000488828 TSR1Q2NL82 804 aaKnown RBP12.34□□□□□ -0.43
NUP98-212ENST00000488828 LRIT3Q3SXY7 679 aa12.34□□□□□ -0.43
NUP98-212ENST00000488828 XKR9Q5GH70 373 aa12.34□□□□□ -0.43
NUP98-212ENST00000488828 PLA2G4FQ68DD2 849 aa12.34□□□□□ -0.43
NUP98-212ENST00000488828 DTHD1Q6ZMT9 781 aa12.34□□□□□ -0.43
NUP98-212ENST00000488828 BRAPQ7Z569 592 aa12.34□□□□□ -0.43
NUP98-212ENST00000488828 SPNS2Q8IVW8 549 aa12.34□□□□□ -0.43
NUP98-212ENST00000488828 LRCH3Q96II8 777 aa12.34□□□□□ -0.43
NUP98-212ENST00000488828 CEP170P1Q96L14 293 aa12.34□□□□□ -0.43
NUP98-212ENST00000488828 SCLT1Q96NL6 688 aa12.34□□□□□ -0.43
NUP98-212ENST00000488828 MAP7D2Q96T17 732 aa12.34□□□□□ -0.43
NUP98-212ENST00000488828 LXNQ9BS40 222 aa12.34□□□□□ -0.43
NUP98-212ENST00000488828 NIFKQ9BYG3 293 aaKnown RBP12.34□□□□□ -0.43
NUP98-212ENST00000488828 RAB34Q9BZG1 259 aa12.34□□□□□ -0.43
NUP98-212ENST00000488828 CXXC1Q9P0U4 656 aaPredicted RBP12.34□□□□□ -0.43
NUP98-212ENST00000488828 LRWD1Q9UFC0 647 aa12.34□□□□□ -0.43
NUP98-212ENST00000488828 AKT3Q9Y243 479 aa12.34□□□□□ -0.43
NUP98-212ENST00000488828 CDY2AQ9Y6F7 541 aa12.34□□□□□ -0.43
NUP98-212ENST00000488828 LTBP2Q14767 1821 aa12.33□□□□□ -0.44
NUP98-212ENST00000488828 TRIP12Q14669 1992 aaPredicted RBP12.33□□□□□ -0.44
NUP98-212ENST00000488828 A0A087WWV3 80 aa12.33□□□□□ -0.44
NUP98-212ENST00000488828 ZBTB42B2RXF5 422 aa12.33□□□□□ -0.44
NUP98-212ENST00000488828 PPP1R3GB7ZBB8 358 aa12.33□□□□□ -0.44
NUP98-212ENST00000488828 LAD1O00515 517 aa12.33□□□□□ -0.44
NUP98-212ENST00000488828 STX6O43752 255 aa12.33□□□□□ -0.44
NUP98-212ENST00000488828 SLITRK3O94933 977 aa12.33□□□□□ -0.44
NUP98-212ENST00000488828 C22orf31O95567 290 aa12.33□□□□□ -0.44
NUP98-212ENST00000488828 GHRP10912 638 aa12.33□□□□□ -0.44
NUP98-212ENST00000488828 COL9A1P20849 921 aa12.33□□□□□ -0.44
NUP98-212ENST00000488828 YWHABP31946 246 aaKnown RBP12.33□□□□□ -0.44
NUP98-212ENST00000488828 CLCN3P51790 818 aa12.33□□□□□ -0.44
NUP98-212ENST00000488828 NPEPPSP55786 919 aa12.33□□□□□ -0.44
NUP98-212ENST00000488828 SPIRE1Q08AE8 756 aa12.33□□□□□ -0.44
NUP98-212ENST00000488828 MBTPS1Q14703 1052 aa12.33□□□□□ -0.44
NUP98-212ENST00000488828 ZRSR1Q15695 479 aaKnown RBP12.33□□□□□ -0.44
NUP98-212ENST00000488828 FOXD4L5Q5VV16 416 aaPredicted RBP12.33□□□□□ -0.44
NUP98-212ENST00000488828 CNKSR3Q6P9H4 555 aa12.33□□□□□ -0.44
NUP98-212ENST00000488828 ANO5Q75V66 913 aa12.33□□□□□ -0.44
NUP98-212ENST00000488828 RPAINQ86UA6 219 aa12.33□□□□□ -0.44
NUP98-212ENST00000488828 KIAA0319LQ8IZA0 1049 aa12.33□□□□□ -0.44
NUP98-212ENST00000488828 LRRC71Q8N4P6 559 aa12.33□□□□□ -0.44
NUP98-212ENST00000488828 DBF4BQ8NFT6 615 aa12.33□□□□□ -0.44
NUP98-212ENST00000488828 FOXD4L4Q8WXT5 416 aaPredicted RBP12.33□□□□□ -0.44
NUP98-212ENST00000488828 ZBED2Q9BTP6 218 aa12.33□□□□□ -0.44
NUP98-212ENST00000488828 CELF4Q9BZC1 486 aaKnown RBP12.33□□□□□ -0.44
NUP98-212ENST00000488828 TRPV2Q9Y5S1 764 aa12.33□□□□□ -0.44
NUP98-212ENST00000488828 GRXCR1A8MXD5 290 aa12.32□□□□□ -0.44
NUP98-212ENST00000488828 RBAK-RBAKDNI3L0D1 243 aa12.32□□□□□ -0.44
NUP98-212ENST00000488828 SOX1O00570 391 aaPredicted RBP12.32□□□□□ -0.44
NUP98-212ENST00000488828 ZBTB39O15060 712 aa12.32□□□□□ -0.44
NUP98-212ENST00000488828 CXCL10P02778 98 aa12.32□□□□□ -0.44
NUP98-212ENST00000488828 VTNP04004 478 aa12.32□□□□□ -0.44
NUP98-212ENST00000488828 ATP2A2P16615 1042 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms