RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 LYNP07948 512 aa6.86□□□□□ -1.31
SIK3-212ENST00000488337 FAM153BP0C7A2 387 aa6.86□□□□□ -1.31
SIK3-212ENST00000488337 GRIA2P42262 883 aa6.86□□□□□ -1.31
SIK3-212ENST00000488337 AP3M2P53677 418 aa6.86□□□□□ -1.31
SIK3-212ENST00000488337 RAD23BP54727 409 aa6.86□□□□□ -1.31
SIK3-212ENST00000488337 BIRC3Q13489 604 aa6.86□□□□□ -1.31
SIK3-212ENST00000488337 ITGA9Q13797 1035 aa6.86□□□□□ -1.31
SIK3-212ENST00000488337 CTC1Q2NKJ3 1217 aa6.86□□□□□ -1.31
SIK3-212ENST00000488337 FAM153CQ494X1 144 aa6.86□□□□□ -1.31
SIK3-212ENST00000488337 FKBP15Q5T1M5 1219 aa6.86□□□□□ -1.31
SIK3-212ENST00000488337 AGBL2Q5U5Z8 902 aa6.86□□□□□ -1.31
SIK3-212ENST00000488337 NKX2-3Q8TAU0 364 aa6.86□□□□□ -1.31
SIK3-212ENST00000488337 HCAR2Q8TDS4 363 aa6.86□□□□□ -1.31
SIK3-212ENST00000488337 FERMT2Q96AC1 680 aa6.86□□□□□ -1.31
SIK3-212ENST00000488337 SUCLG2Q96I99 432 aa6.86□□□□□ -1.31
SIK3-212ENST00000488337 MED15Q96RN5 788 aa6.86□□□□□ -1.31
SIK3-212ENST00000488337 FAM114A2Q9NRY5 505 aa6.86□□□□□ -1.31
SIK3-212ENST00000488337 CRNNQ9UBG3 495 aaPredicted RBP6.86□□□□□ -1.31
SIK3-212ENST00000488337 SEC63Q9UGP8 760 aaKnown RBP6.86□□□□□ -1.31
SIK3-212ENST00000488337 FAM153AQ9UHL3 310 aa6.86□□□□□ -1.31
SIK3-212ENST00000488337 GPC6Q9Y625 555 aaPredicted RBP6.86□□□□□ -1.31
SIK3-212ENST00000488337 FAM237AA0A1B0GTK4 181 aa6.86□□□□□ -1.31
SIK3-212ENST00000488337 ANO9A1A5B4 782 aa6.86□□□□□ -1.31
SIK3-212ENST00000488337 RASA4BC9J798 803 aa6.86□□□□□ -1.31
SIK3-212ENST00000488337 RASA4O43374 803 aa6.86□□□□□ -1.31
SIK3-212ENST00000488337 MFAP3LO75121 409 aa6.86□□□□□ -1.31
SIK3-212ENST00000488337 TATP17735 454 aaPredicted RBP6.86□□□□□ -1.31
SIK3-212ENST00000488337 BMP6P22004 513 aa6.86□□□□□ -1.31
SIK3-212ENST00000488337 PRCPP42785 496 aa6.86□□□□□ -1.31
SIK3-212ENST00000488337 RPS3AP61247 264 aaKnown RBP6.86□□□□□ -1.31
SIK3-212ENST00000488337 B2MP61769 119 aa6.86□□□□□ -1.31
SIK3-212ENST00000488337 ATP11AP98196 1134 aa6.86□□□□□ -1.31
SIK3-212ENST00000488337 WDR45BQ5MNZ6 344 aa6.86□□□□□ -1.31
SIK3-212ENST00000488337 ZNF598Q86UK7 904 aaKnown RBP6.86□□□□□ -1.31
SIK3-212ENST00000488337 DDX42Q86XP3 938 aaKnown RBP eCLIP6.86□□□□□ -1.31
SIK3-212ENST00000488337 ENOX1Q8TC92 643 aaKnown RBP6.86□□□□□ -1.31
SIK3-212ENST00000488337 KCNG4Q8TDN1 519 aa6.86□□□□□ -1.31
SIK3-212ENST00000488337 CCDC127Q96BQ5 260 aa6.86□□□□□ -1.31
SIK3-212ENST00000488337 TLCD1Q96CP7 247 aa6.86□□□□□ -1.31
SIK3-212ENST00000488337 GBP5Q96PP8 586 aa6.86□□□□□ -1.31
SIK3-212ENST00000488337 PRPF18Q99633 342 aaKnown RBP6.86□□□□□ -1.31
SIK3-212ENST00000488337 KLHL4Q9C0H6 718 aa6.86□□□□□ -1.31
SIK3-212ENST00000488337 DHX36Q9H2U1 1008 aaKnown RBP6.86□□□□□ -1.31
SIK3-212ENST00000488337 STIM2Q9P246 746 aa6.86□□□□□ -1.31
SIK3-212ENST00000488337 INTUQ9ULD6 942 aa6.86□□□□□ -1.31
SIK3-212ENST00000488337 PSME4Q14997 1843 aa6.86□□□□□ -1.31
SIK3-212ENST00000488337 A6NJR5 290 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 H7C1D1 291 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 RNF113AO15541 343 aaKnown RBP6.85□□□□□ -1.31
SIK3-212ENST00000488337 SRGAP2O75044 1071 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 ATP9AO75110 1047 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 ATP2C2O75185 946 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 LDHBP07195 334 aaKnown RBP6.85□□□□□ -1.31
SIK3-212ENST00000488337 ETS2P15036 469 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 GBP1P32455 592 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 GALK1P51570 392 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 PPP2R2AP63151 447 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 POU5F1Q01860 360 aaKnown RBP6.85□□□□□ -1.31
SIK3-212ENST00000488337 COG2Q14746 738 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 SF3B3Q15393 1217 aaKnown RBP6.85□□□□□ -1.31
SIK3-212ENST00000488337 C6orf183Q5T699 404 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 OLFML2BQ68BL8 750 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 OTUD7BQ6GQQ9 843 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 CCDC129Q6ZRS4 1044 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 RALYLQ86SE5 291 aaKnown RBP6.85□□□□□ -1.31
SIK3-212ENST00000488337 CRACR2BQ8N4Y2 399 aaPredicted RBP6.85□□□□□ -1.31
SIK3-212ENST00000488337 PDILTQ8N807 584 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 SUPT20HQ8NEM7 779 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 PLEKHO2Q8TD55 490 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 HAUS1Q96CS2 278 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 CDK5RAP3Q96JB5 506 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 TLR7Q9NYK1 1049 aaKnown RBP6.85□□□□□ -1.31
SIK3-212ENST00000488337 PCDHGB3Q9Y5G1 929 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 TMEM131LA2VDJ0 1609 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 SH3PXD2BA1X283 911 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 ANKRD34BA5PLL1 514 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 CBFA2T3O75081 653 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 GJB6O95452 261 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 MZF1P28698 734 aaPredicted RBP6.85□□□□□ -1.31
SIK3-212ENST00000488337 MTMR3Q13615 1198 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 TGFBIQ15582 683 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 Q3C1V9 767 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 AKAP4Q5JQC9 854 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 OLFM4Q6UX06 510 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 UNC13DQ70J99 1090 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 MARK2Q7KZI7 788 aaKnown RBP6.85□□□□□ -1.31
SIK3-212ENST00000488337 HS6ST3Q8IZP7 471 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 EIF1ADQ8N9N8 165 aaKnown RBP6.85□□□□□ -1.31
SIK3-212ENST00000488337 PIGOQ8TEQ8 1089 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 EFHD2Q96C19 240 aaPredicted RBP6.85□□□□□ -1.31
SIK3-212ENST00000488337 CCDC51Q96ER9 411 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 MED30Q96HR3 178 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 C1orf74Q96LT6 269 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 CCDC43Q96MW1 224 aaKnown RBP6.85□□□□□ -1.31
SIK3-212ENST00000488337 TMEM237Q96Q45 408 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 UIMC1Q96RL1 719 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 ADAM7Q9H2U9 754 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 PRKAG3Q9UGI9 489 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 NDUFB9Q9Y6M9 179 aa6.85□□□□□ -1.31
SIK3-212ENST00000488337 USP31Q70CQ4 1352 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms