RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 DKC1O60832 514 aaKnown RBP eCLIP22.94■■□□□ 1.263e-8■■■■■ 43.4
HDAC4-209ENST00000487617 P4HBP07237 508 aaKnown RBP22.94■■□□□ 1.26
HDAC4-209ENST00000487617 POU3F3P20264 500 aaPredicted RBP22.94■■□□□ 1.26
HDAC4-209ENST00000487617 NLRP11P59045 1033 aaKnown RBP22.94■■□□□ 1.26
HDAC4-209ENST00000487617 EPHA7Q15375 998 aa22.94■■□□□ 1.26
HDAC4-209ENST00000487617 CALCRLQ16602 461 aa22.94■■□□□ 1.26
HDAC4-209ENST00000487617 NCAPH2Q6IBW4 605 aa22.94■■□□□ 1.26
HDAC4-209ENST00000487617 GDPD5Q8WTR4 605 aa22.94■■□□□ 1.26
HDAC4-209ENST00000487617 SH2D3AQ9BRG2 576 aa22.94■■□□□ 1.26
HDAC4-209ENST00000487617 C17orf80Q9BSJ5 609 aa22.94■■□□□ 1.26
HDAC4-209ENST00000487617 TSPYL2Q9H2G4 693 aaPredicted RBP22.94■■□□□ 1.26
HDAC4-209ENST00000487617 TMX1Q9H3N1 280 aa22.94■■□□□ 1.26
HDAC4-209ENST00000487617 WNT7AO00755 349 aa22.93■■□□□ 1.26
HDAC4-209ENST00000487617 GPR182O15218 404 aa22.93■■□□□ 1.26
HDAC4-209ENST00000487617 NEMFO60524 1076 aa22.93■■□□□ 1.26
HDAC4-209ENST00000487617 ZNF710Q8N1W2 664 aa22.93■■□□□ 1.26
HDAC4-209ENST00000487617 FBXO22Q8NEZ5 403 aa22.93■■□□□ 1.26
HDAC4-209ENST00000487617 ST3GAL5Q9UNP4 418 aa22.93■■□□□ 1.26
HDAC4-209ENST00000487617 LPXNO60711 386 aa22.92■■□□□ 1.26
HDAC4-209ENST00000487617 ATP2B1P20020 1258 aa22.92■■□□□ 1.26
HDAC4-209ENST00000487617 PLA2G4FQ68DD2 849 aa22.92■■□□□ 1.26
HDAC4-209ENST00000487617 ANO5Q75V66 913 aa22.92■■□□□ 1.26
HDAC4-209ENST00000487617 FAM228AQ86W67 206 aa22.92■■□□□ 1.26
HDAC4-209ENST00000487617 NPAS4Q8IUM7 802 aa22.92■■□□□ 1.26
HDAC4-209ENST00000487617 FBXO18Q8NFZ0 1043 aa22.92■■□□□ 1.26
HDAC4-209ENST00000487617 ZNF668Q96K58 619 aaPredicted RBP22.92■■□□□ 1.26
HDAC4-209ENST00000487617 SCLT1Q96NL6 688 aa22.92■■□□□ 1.26
HDAC4-209ENST00000487617 SAMD11Q96NU1 681 aa22.92■■□□□ 1.26
HDAC4-209ENST00000487617 CEP89Q96ST8 783 aa22.92■■□□□ 1.26
HDAC4-209ENST00000487617 ADAMTS10Q9H324 1103 aa22.92■■□□□ 1.26
HDAC4-209ENST00000487617 PRDM6Q9NQX0 595 aa22.92■■□□□ 1.26
HDAC4-209ENST00000487617 PCDHA12Q9UN75 941 aa22.92■■□□□ 1.26
HDAC4-209ENST00000487617 CHD7Q9P2D1 2997 aa22.91■■□□□ 1.26
HDAC4-209ENST00000487617 DENND3A2RUS2 1198 aa22.91■■□□□ 1.26
HDAC4-209ENST00000487617 IBSPP21815 317 aaPredicted RBP22.91■■□□□ 1.26
HDAC4-209ENST00000487617 GPC3P51654 580 aa22.91■■□□□ 1.26
HDAC4-209ENST00000487617 SPIRE1Q08AE8 756 aa22.91■■□□□ 1.26
HDAC4-209ENST00000487617 GNL2Q13823 731 aaKnown RBP22.91■■□□□ 1.26
HDAC4-209ENST00000487617 FAM43BQ6ZT52 329 aaPredicted RBP22.91■■□□□ 1.26
HDAC4-209ENST00000487617 FIBCD1Q8N539 461 aa22.91■■□□□ 1.26
HDAC4-209ENST00000487617 IL27Q8NEV9 243 aa22.91■■□□□ 1.26
HDAC4-209ENST00000487617 DYDC2Q96IM9 177 aa22.91■■□□□ 1.26
HDAC4-209ENST00000487617 LXNQ9BS40 222 aa22.91■■□□□ 1.26
HDAC4-209ENST00000487617 FOXP1Q9H334 677 aaPredicted RBP22.91■■□□□ 1.26
HDAC4-209ENST00000487617 RGL1Q9NZL6 768 aa22.91■■□□□ 1.26
HDAC4-209ENST00000487617 WRAP73Q9P2S5 460 aaPredicted RBP22.91■■□□□ 1.26
HDAC4-209ENST00000487617 EVPLQ92817 2033 aa22.91■■□□□ 1.26
HDAC4-209ENST00000487617 ADGRA3Q8IWK6 1321 aa22.9■■□□□ 1.26
HDAC4-209ENST00000487617 MGEA5O60502 916 aa22.9■■□□□ 1.26
HDAC4-209ENST00000487617 STAG3L1P0CL83 205 aa22.9■■□□□ 1.26
HDAC4-209ENST00000487617 MCM7P33993 719 aa22.9■■□□□ 1.26
HDAC4-209ENST00000487617 TXKP42681 527 aa22.9■■□□□ 1.26
HDAC4-209ENST00000487617 DNM2P50570 870 aa22.9■■□□□ 1.26
HDAC4-209ENST00000487617 DRP2Q13474 957 aa22.9■■□□□ 1.26
HDAC4-209ENST00000487617 EPC2Q52LR7 807 aa22.9■■□□□ 1.26
HDAC4-209ENST00000487617 NLRP7Q8WX94 980 aa22.9■■□□□ 1.26
HDAC4-209ENST00000487617 TBC1D32Q96NH3 1257 aa22.9■■□□□ 1.26
HDAC4-209ENST00000487617 ADAM2Q99965 735 aa22.9■■□□□ 1.26
HDAC4-209ENST00000487617 TTC12Q9H892 705 aaPredicted RBP22.9■■□□□ 1.26
HDAC4-209ENST00000487617 CYP26B1Q9NR63 512 aa22.9■■□□□ 1.26
HDAC4-209ENST00000487617 LRFN2Q9ULH4 789 aa22.9■■□□□ 1.26
HDAC4-209ENST00000487617 IGKV6-21A0A0C4DH24 114 aa22.89■■□□□ 1.25
HDAC4-209ENST00000487617 MAFO75444 373 aaPredicted RBP22.89■■□□□ 1.25
HDAC4-209ENST00000487617 DGKIO75912 1065 aa22.89■■□□□ 1.25
HDAC4-209ENST00000487617 EIF4BP23588 611 aaKnown RBP22.89■■□□□ 1.25
HDAC4-209ENST00000487617 SARSP49591 514 aaKnown RBP22.89■■□□□ 1.25
HDAC4-209ENST00000487617 NPEPPSP55786 919 aa22.89■■□□□ 1.25
HDAC4-209ENST00000487617 CYP4A11Q02928 519 aa22.89■■□□□ 1.25
HDAC4-209ENST00000487617 BTG3Q14201 252 aaPredicted RBP22.89■■□□□ 1.25
HDAC4-209ENST00000487617 CTTNQ14247 550 aaKnown RBP22.89■■□□□ 1.25
HDAC4-209ENST00000487617 SKIV2LQ15477 1246 aaKnown RBP22.89■■□□□ 1.25
HDAC4-209ENST00000487617 C4orf19Q8IY42 314 aa22.89■■□□□ 1.25
HDAC4-209ENST00000487617 TMEM192Q8IY95 271 aa22.89■■□□□ 1.25
HDAC4-209ENST00000487617 ZNF689Q96CS4 500 aaPredicted RBP22.89■■□□□ 1.25
HDAC4-209ENST00000487617 CEP170P1Q96L14 293 aa22.89■■□□□ 1.25
HDAC4-209ENST00000487617 MTMR9Q96QG7 549 aa22.89■■□□□ 1.25
HDAC4-209ENST00000487617 JPH2Q9BR39 696 aaPredicted RBP22.89■■□□□ 1.25
HDAC4-209ENST00000487617 ZSWIM4Q9H7M6 989 aa22.89■■□□□ 1.25
HDAC4-209ENST00000487617 RC3H2Q9HBD1 1191 aaKnown RBP22.89■■□□□ 1.25
HDAC4-209ENST00000487617 C1orf112Q9NSG2 853 aa22.89■■□□□ 1.25
HDAC4-209ENST00000487617 WDR81Q562E7 1941 aa22.88■■□□□ 1.25
HDAC4-209ENST00000487617 YWHABP31946 246 aaKnown RBP22.88■■□□□ 1.25
HDAC4-209ENST00000487617 OTUD6AQ7L8S5 288 aa22.88■■□□□ 1.25
HDAC4-209ENST00000487617 TPH2Q8IWU9 490 aa22.88■■□□□ 1.25
HDAC4-209ENST00000487617 CRIPAKQ8N1N5 446 aa22.88■■□□□ 1.25
HDAC4-209ENST00000487617 TMX3Q96JJ7 454 aa22.88■■□□□ 1.25
HDAC4-209ENST00000487617 EIF2AK1Q9BQI3 630 aaKnown RBP22.88■■□□□ 1.25
HDAC4-209ENST00000487617 TMEM60Q9H2L4 133 aa22.88■■□□□ 1.25
HDAC4-209ENST00000487617 RGS18Q9NS28 235 aa22.88■■□□□ 1.25
HDAC4-209ENST00000487617 LMCD1Q9NZU5 365 aa22.88■■□□□ 1.25
HDAC4-209ENST00000487617 SUCLA2Q9P2R7 463 aaPredicted RBP22.88■■□□□ 1.25
HDAC4-209ENST00000487617 PCDHB7Q9Y5E2 793 aa22.88■■□□□ 1.25
HDAC4-209ENST00000487617 COL4A6Q14031 1691 aa22.87■■□□□ 1.25
HDAC4-209ENST00000487617 DLL1O00548 723 aa22.87■■□□□ 1.25
HDAC4-209ENST00000487617 CD2BP2O95400 341 aaKnown RBP22.87■■□□□ 1.25
HDAC4-209ENST00000487617 DARSP14868 501 aaKnown RBP22.87■■□□□ 1.25
HDAC4-209ENST00000487617 CDC42EP1Q00587 391 aa22.87■■□□□ 1.25
HDAC4-209ENST00000487617 ZNF174Q15697 407 aa22.87■■□□□ 1.25
HDAC4-209ENST00000487617 SLC24A5Q71RS6 500 aa22.87■■□□□ 1.25
HDAC4-209ENST00000487617 NOSTRINQ8IVI9 506 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms