RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 ALS2CLQ60I27 953 aa12.78□□□□□ -0.36
TRA2B-214ENST00000487615 APOBEC3HQ6NTF7 200 aaKnown RBP12.78□□□□□ -0.36
TRA2B-214ENST00000487615 KCND2Q9NZV8 630 aa12.78□□□□□ -0.36
TRA2B-214ENST00000487615 NFU1Q9UMS0 254 aa12.78□□□□□ -0.36
TRA2B-214ENST00000487615 LRRC10BA6NIK2 292 aa12.78□□□□□ -0.36
TRA2B-214ENST00000487615 RGS16O15492 202 aaPredicted RBP12.78□□□□□ -0.36
TRA2B-214ENST00000487615 ECM2O94769 699 aaPredicted RBP12.78□□□□□ -0.36
TRA2B-214ENST00000487615 MAPK4P31152 587 aa12.78□□□□□ -0.36
TRA2B-214ENST00000487615 SREBF1P36956 1147 aa12.78□□□□□ -0.36
TRA2B-214ENST00000487615 PAF1Q8N7H5 531 aa12.78□□□□□ -0.36
TRA2B-214ENST00000487615 GRK7Q8WTQ7 553 aa12.78□□□□□ -0.36
TRA2B-214ENST00000487615 TNFRSF25Q93038 417 aa12.78□□□□□ -0.36
TRA2B-214ENST00000487615 POLR3CQ9BUI4 534 aaPredicted RBP12.78□□□□□ -0.36
TRA2B-214ENST00000487615 TMEM39BQ9GZU3 492 aa12.78□□□□□ -0.36
TRA2B-214ENST00000487615 PCDHB4Q9Y5E5 795 aa12.78□□□□□ -0.36
TRA2B-214ENST00000487615 TARSL2A2RTX5 802 aaKnown RBP12.78□□□□□ -0.36
TRA2B-214ENST00000487615 WNT7AO00755 349 aa12.78□□□□□ -0.36
TRA2B-214ENST00000487615 MED24O75448 989 aa12.78□□□□□ -0.36
TRA2B-214ENST00000487615 TM4SF1P30408 202 aa12.78□□□□□ -0.36
TRA2B-214ENST00000487615 TRIM65Q6PJ69 517 aa12.78□□□□□ -0.36
TRA2B-214ENST00000487615 INTS2Q9H0H0 1204 aaKnown RBP12.78□□□□□ -0.36
TRA2B-214ENST00000487615 INTS13Q9NVM9 706 aa12.78□□□□□ -0.36
TRA2B-214ENST00000487615 E7EVH7 732 aa12.78□□□□□ -0.36
TRA2B-214ENST00000487615 K7ERI5 159 aa12.78□□□□□ -0.36
TRA2B-214ENST00000487615 PPFIA4O75335 1185 aa12.78□□□□□ -0.36
TRA2B-214ENST00000487615 RFX1P22670 979 aa12.78□□□□□ -0.36
TRA2B-214ENST00000487615 HAUS6Q7Z4H7 955 aa12.78□□□□□ -0.36
TRA2B-214ENST00000487615 KIAA0895Q8NCT3 520 aa12.78□□□□□ -0.36
TRA2B-214ENST00000487615 SPATA20Q8TB22 786 aa12.78□□□□□ -0.36
TRA2B-214ENST00000487615 RUNDC3BQ96NL0 473 aa12.78□□□□□ -0.36
TRA2B-214ENST00000487615 P4HA1P13674 534 aa12.77□□□□□ -0.36
TRA2B-214ENST00000487615 SLC15A2Q16348 729 aa12.77□□□□□ -0.36
TRA2B-214ENST00000487615 GMCL1P1Q8NEA9 526 aa12.77□□□□□ -0.36
TRA2B-214ENST00000487615 ACER1Q8TDN7 264 aa12.77□□□□□ -0.36
TRA2B-214ENST00000487615 JPH2Q9BR39 696 aaPredicted RBP12.77□□□□□ -0.36
TRA2B-214ENST00000487615 DENND3A2RUS2 1198 aa12.77□□□□□ -0.37
TRA2B-214ENST00000487615 ZNF185O15231 689 aa12.77□□□□□ -0.37
TRA2B-214ENST00000487615 ZBTB7AO95365 584 aa12.77□□□□□ -0.37
TRA2B-214ENST00000487615 FGGP02679 453 aa12.77□□□□□ -0.37
TRA2B-214ENST00000487615 ECE1P42892 770 aa12.77□□□□□ -0.37
TRA2B-214ENST00000487615 VPS41P49754 854 aa12.77□□□□□ -0.37
TRA2B-214ENST00000487615 GLYCTKQ8IVS8 523 aa12.77□□□□□ -0.37
TRA2B-214ENST00000487615 NKX2-3Q8TAU0 364 aa12.77□□□□□ -0.37
TRA2B-214ENST00000487615 PNMA5Q96PV4 448 aa12.77□□□□□ -0.37
TRA2B-214ENST00000487615 RIT2Q99578 217 aa12.77□□□□□ -0.37
TRA2B-214ENST00000487615 ZCCHC17Q9NP64 241 aaKnown RBP12.77□□□□□ -0.37
TRA2B-214ENST00000487615 RAB20Q9NX57 234 aa12.77□□□□□ -0.37
TRA2B-214ENST00000487615 HOXC10Q9NYD6 342 aa12.77□□□□□ -0.37
TRA2B-214ENST00000487615 ACTN1P12814 892 aa12.77□□□□□ -0.37
TRA2B-214ENST00000487615 SOX5P35711 763 aa12.77□□□□□ -0.37
TRA2B-214ENST00000487615 CUL1Q13616 776 aa12.77□□□□□ -0.37
TRA2B-214ENST00000487615 BRDTQ58F21 947 aaPredicted RBP12.77□□□□□ -0.37
TRA2B-214ENST00000487615 RPAP3Q9H6T3 665 aaPredicted RBP12.77□□□□□ -0.37
TRA2B-214ENST00000487615 ATP6V0A4Q9HBG4 840 aa12.77□□□□□ -0.37
TRA2B-214ENST00000487615 PPANQ9NQ55 473 aaKnown RBP12.77□□□□□ -0.37
TRA2B-214ENST00000487615 PACSIN2Q9UNF0 486 aaPredicted RBP12.77□□□□□ -0.37
TRA2B-214ENST00000487615 GRID2IPA4D2P6 1211 aa12.76□□□□□ -0.37
TRA2B-214ENST00000487615 SLC9A1P19634 815 aa12.76□□□□□ -0.37
TRA2B-214ENST00000487615 DHX37Q8IY37 1157 aaKnown RBP12.76□□□□□ -0.37
TRA2B-214ENST00000487615 GSPT2Q8IYD1 628 aaKnown RBP12.76□□□□□ -0.37
TRA2B-214ENST00000487615 CABS1Q96KC9 395 aa12.76□□□□□ -0.37
TRA2B-214ENST00000487615 IDI2Q9BXS1 227 aa12.76□□□□□ -0.37
TRA2B-214ENST00000487615 GABBR1Q9UBS5 961 aa12.76□□□□□ -0.37
TRA2B-214ENST00000487615 TFR2Q9UP52 801 aa12.76□□□□□ -0.37
TRA2B-214ENST00000487615 EMSYQ7Z589 1322 aa12.76□□□□□ -0.37
TRA2B-214ENST00000487615 ANXA13P27216 316 aa12.76□□□□□ -0.37
TRA2B-214ENST00000487615 POLR2BP30876 1174 aaKnown RBP12.76□□□□□ -0.37
TRA2B-214ENST00000487615 INPP5BP32019 993 aa12.76□□□□□ -0.37
TRA2B-214ENST00000487615 ADCY8P40145 1251 aa12.76□□□□□ -0.37
TRA2B-214ENST00000487615 GYS2P54840 703 aa12.76□□□□□ -0.37
TRA2B-214ENST00000487615 SYN2Q92777 582 aaPredicted RBP12.76□□□□□ -0.37
TRA2B-214ENST00000487615 DUSP9Q99956 384 aaKnown RBP12.76□□□□□ -0.37
TRA2B-214ENST00000487615 TRIM6Q9C030 488 aaPredicted RBP12.76□□□□□ -0.37
TRA2B-214ENST00000487615 PCDHA10Q9Y5I2 948 aa12.76□□□□□ -0.37
TRA2B-214ENST00000487615 MIF4GDA9UHW6 222 aaKnown RBP12.76□□□□□ -0.37
TRA2B-214ENST00000487615 EIF3DO15371 548 aaKnown RBP eCLIP12.76□□□□□ -0.37
TRA2B-214ENST00000487615 PLEKP08567 350 aaPredicted RBP12.76□□□□□ -0.37
TRA2B-214ENST00000487615 H2AFXP16104 143 aaPredicted RBP12.76□□□□□ -0.37
TRA2B-214ENST00000487615 MNAT1P51948 309 aa12.76□□□□□ -0.37
TRA2B-214ENST00000487615 LACTBP83111 547 aaPredicted RBP12.76□□□□□ -0.37
TRA2B-214ENST00000487615 MTMR2Q13614 643 aa12.76□□□□□ -0.37
TRA2B-214ENST00000487615 STXBP2Q15833 593 aa12.76□□□□□ -0.37
TRA2B-214ENST00000487615 IL17AQ16552 155 aa12.76□□□□□ -0.37
TRA2B-214ENST00000487615 IPO4Q8TEX9 1081 aaKnown RBP12.76□□□□□ -0.37
TRA2B-214ENST00000487615 BLOC1S4Q9NUP1 217 aa12.76□□□□□ -0.37
TRA2B-214ENST00000487615 FHOD1Q9Y613 1164 aa12.76□□□□□ -0.37
TRA2B-214ENST00000487615 INO80B-WBP1J3KQ70 363 aa12.76□□□□□ -0.37
TRA2B-214ENST00000487615 ATF7P17544 494 aaPredicted RBP12.76□□□□□ -0.37
TRA2B-214ENST00000487615 YWHABP31946 246 aaKnown RBP12.76□□□□□ -0.37
TRA2B-214ENST00000487615 PLTPP55058 493 aa12.76□□□□□ -0.37
TRA2B-214ENST00000487615 SNX16P57768 344 aa12.76□□□□□ -0.37
TRA2B-214ENST00000487615 MAPK8IP2Q13387 824 aaPredicted RBP12.76□□□□□ -0.37
TRA2B-214ENST00000487615 TFDP1Q14186 410 aa12.76□□□□□ -0.37
TRA2B-214ENST00000487615 SLFN12LQ6IEE8 588 aa12.76□□□□□ -0.37
TRA2B-214ENST00000487615 DPY19L2Q6NUT2 758 aa12.76□□□□□ -0.37
TRA2B-214ENST00000487615 EEPD1Q7L9B9 569 aa12.76□□□□□ -0.37
TRA2B-214ENST00000487615 NOA1Q8NC60 698 aaKnown RBP12.76□□□□□ -0.37
TRA2B-214ENST00000487615 MXRA8Q9BRK3 442 aa12.76□□□□□ -0.37
TRA2B-214ENST00000487615 MKNK1Q9BUB5 465 aa12.76□□□□□ -0.37
TRA2B-214ENST00000487615 INO80BQ9C086 356 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms