RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 TBC1D8BQ0IIM8 1120 aa12.87□□□□□ -0.35
SPEN-205ENST00000487496 MTERF2Q49AM1 385 aa12.87□□□□□ -0.35
SPEN-205ENST00000487496 EPC2Q52LR7 807 aa12.87□□□□□ -0.35
SPEN-205ENST00000487496 FAM43BQ6ZT52 329 aaPredicted RBP12.87□□□□□ -0.35
SPEN-205ENST00000487496 SLFN12Q8IYM2 578 aa12.87□□□□□ -0.35
SPEN-205ENST00000487496 FIBCD1Q8N539 461 aa12.87□□□□□ -0.35
SPEN-205ENST00000487496 FBXO22Q8NEZ5 403 aa12.87□□□□□ -0.35
SPEN-205ENST00000487496 ZNF689Q96CS4 500 aaPredicted RBP12.87□□□□□ -0.35
SPEN-205ENST00000487496 SAMD11Q96NU1 681 aa12.87□□□□□ -0.35
SPEN-205ENST00000487496 CEP89Q96ST8 783 aa12.87□□□□□ -0.35
SPEN-205ENST00000487496 MAP7D2Q96T17 732 aa12.87□□□□□ -0.35
SPEN-205ENST00000487496 COL25A1Q9BXS0 654 aaPredicted RBP12.87□□□□□ -0.35
SPEN-205ENST00000487496 ADAMTS10Q9H324 1103 aa12.87□□□□□ -0.35
SPEN-205ENST00000487496 RC3H2Q9HBD1 1191 aaKnown RBP12.87□□□□□ -0.35
SPEN-205ENST00000487496 LMCD1Q9NZU5 365 aa12.87□□□□□ -0.35
SPEN-205ENST00000487496 SEPT9Q9UHD8 586 aaPredicted RBP12.87□□□□□ -0.35
SPEN-205ENST00000487496 AKT3Q9Y243 479 aa12.87□□□□□ -0.35
SPEN-205ENST00000487496 EYSQ5T1H1 3165 aa12.86□□□□□ -0.35
SPEN-205ENST00000487496 DGKIO75912 1065 aa12.86□□□□□ -0.35
SPEN-205ENST00000487496 QARSP47897 775 aaKnown RBP12.86□□□□□ -0.35
SPEN-205ENST00000487496 GUCY1B3Q02153 619 aa12.86□□□□□ -0.35
SPEN-205ENST00000487496 EPHA7Q15375 998 aa12.86□□□□□ -0.35
SPEN-205ENST00000487496 ODR4Q5SWX8 454 aa12.86□□□□□ -0.35
SPEN-205ENST00000487496 ANO5Q75V66 913 aa12.86□□□□□ -0.35
SPEN-205ENST00000487496 FAM228AQ86W67 206 aa12.86□□□□□ -0.35
SPEN-205ENST00000487496 NPAS4Q8IUM7 802 aa12.86□□□□□ -0.35
SPEN-205ENST00000487496 TMEM192Q8IY95 271 aa12.86□□□□□ -0.35
SPEN-205ENST00000487496 ZNF710Q8N1W2 664 aa12.86□□□□□ -0.35
SPEN-205ENST00000487496 ATXN2LQ8WWM7 1075 aaKnown RBP12.86□□□□□ -0.35
SPEN-205ENST00000487496 SH2D3AQ9BRG2 576 aa12.86□□□□□ -0.35
SPEN-205ENST00000487496 SH2B1Q9NRF2 756 aaPredicted RBP12.86□□□□□ -0.35
SPEN-205ENST00000487496 THEGQ9P2T0 379 aa12.86□□□□□ -0.35
SPEN-205ENST00000487496 TTC3P53804 2025 aa12.86□□□□□ -0.35
SPEN-205ENST00000487496 EVPLQ92817 2033 aa12.86□□□□□ -0.35
SPEN-205ENST00000487496 COL4A6Q14031 1691 aa12.86□□□□□ -0.35
SPEN-205ENST00000487496 ADGRA3Q8IWK6 1321 aa12.86□□□□□ -0.35
SPEN-205ENST00000487496 IGKV6-21A0A0C4DH24 114 aa12.85□□□□□ -0.35
SPEN-205ENST00000487496 WNT7AO00755 349 aa12.85□□□□□ -0.35
SPEN-205ENST00000487496 MGEA5O60502 916 aa12.85□□□□□ -0.35
SPEN-205ENST00000487496 BAG4O95429 457 aaKnown RBP12.85□□□□□ -0.35
SPEN-205ENST00000487496 P4HBP07237 508 aaKnown RBP12.85□□□□□ -0.35
SPEN-205ENST00000487496 LINC00271P0C7V0 271 aa12.85□□□□□ -0.35
SPEN-205ENST00000487496 STAG3L1P0CL83 205 aa12.85□□□□□ -0.35
SPEN-205ENST00000487496 GPC3P51654 580 aa12.85□□□□□ -0.35
SPEN-205ENST00000487496 SPIRE1Q08AE8 756 aa12.85□□□□□ -0.35
SPEN-205ENST00000487496 DRP2Q13474 957 aa12.85□□□□□ -0.35
SPEN-205ENST00000487496 BTG3Q14201 252 aaPredicted RBP12.85□□□□□ -0.35
SPEN-205ENST00000487496 RABEP1Q15276 862 aa12.85□□□□□ -0.35
SPEN-205ENST00000487496 SAFBQ15424 915 aaKnown RBP eCLIP12.85□□□□□ -0.35
SPEN-205ENST00000487496 SKIV2LQ15477 1246 aaKnown RBP12.85□□□□□ -0.35
SPEN-205ENST00000487496 C8orf76Q96K31 380 aa12.85□□□□□ -0.35
SPEN-205ENST00000487496 ZNF668Q96K58 619 aaPredicted RBP12.85□□□□□ -0.35
SPEN-205ENST00000487496 ADAM2Q99965 735 aa12.85□□□□□ -0.35
SPEN-205ENST00000487496 RGS18Q9NS28 235 aa12.85□□□□□ -0.35
SPEN-205ENST00000487496 WRAP73Q9P2S5 460 aaPredicted RBP12.85□□□□□ -0.35
SPEN-205ENST00000487496 WDR81Q562E7 1941 aa12.84□□□□□ -0.35
SPEN-205ENST00000487496 DENND3A2RUS2 1198 aa12.84□□□□□ -0.35
SPEN-205ENST00000487496 H3BNC9 293 aa12.84□□□□□ -0.35
SPEN-205ENST00000487496 DKC1O60832 514 aaKnown RBP eCLIP12.84□□□□□ -0.35
SPEN-205ENST00000487496 MAFO75444 373 aaPredicted RBP12.84□□□□□ -0.35
SPEN-205ENST00000487496 EIF4BP23588 611 aaKnown RBP12.84□□□□□ -0.35
SPEN-205ENST00000487496 BMPR1AP36894 532 aa12.84□□□□□ -0.35
SPEN-205ENST00000487496 SARSP49591 514 aaKnown RBP12.84□□□□□ -0.35
SPEN-205ENST00000487496 HMGN5P82970 282 aaKnown RBP12.84□□□□□ -0.35
SPEN-205ENST00000487496 GPM6BQ13491 265 aa12.84□□□□□ -0.35
SPEN-205ENST00000487496 CALCRLQ16602 461 aa12.84□□□□□ -0.35
SPEN-205ENST00000487496 TJAP1Q5JTD0 557 aa12.84□□□□□ -0.35
SPEN-205ENST00000487496 PLA2G4FQ68DD2 849 aa12.84□□□□□ -0.35
SPEN-205ENST00000487496 NCAPH2Q6IBW4 605 aa12.84□□□□□ -0.35
SPEN-205ENST00000487496 SLC24A5Q71RS6 500 aa12.84□□□□□ -0.35
SPEN-205ENST00000487496 FBXO18Q8NFZ0 1043 aa12.84□□□□□ -0.35
SPEN-205ENST00000487496 CLP1Q92989 425 aaKnown RBP12.84□□□□□ -0.35
SPEN-205ENST00000487496 LXNQ9BS40 222 aa12.84□□□□□ -0.35
SPEN-205ENST00000487496 C1orf112Q9NSG2 853 aa12.84□□□□□ -0.35
SPEN-205ENST00000487496 RGL1Q9NZL6 768 aa12.84□□□□□ -0.35
SPEN-205ENST00000487496 PCDHA12Q9UN75 941 aa12.84□□□□□ -0.35
SPEN-205ENST00000487496 PCDHB7Q9Y5E2 793 aa12.84□□□□□ -0.35
SPEN-205ENST00000487496 UNC80Q8N2C7 3258 aa12.84□□□□□ -0.35
SPEN-205ENST00000487496 LOXHD1Q8IVV2 1947 aa12.84□□□□□ -0.35
SPEN-205ENST00000487496 C9IYK1 514 aa12.83□□□□□ -0.36
SPEN-205ENST00000487496 C5orf67F2Z3F1 127 aa12.83□□□□□ -0.36
SPEN-205ENST00000487496 NEMFO60524 1076 aa12.83□□□□□ -0.36
SPEN-205ENST00000487496 RB1P06400 928 aa12.83□□□□□ -0.36
SPEN-205ENST00000487496 DARSP14868 501 aaKnown RBP12.83□□□□□ -0.36
SPEN-205ENST00000487496 IBSPP21815 317 aaPredicted RBP12.83□□□□□ -0.36
SPEN-205ENST00000487496 CTNNB1P35222 781 aa12.83□□□□□ -0.36
SPEN-205ENST00000487496 GATMP50440 423 aa12.83□□□□□ -0.36
SPEN-205ENST00000487496 DNM2P50570 870 aa12.83□□□□□ -0.36
SPEN-205ENST00000487496 NPEPPSP55786 919 aa12.83□□□□□ -0.36
SPEN-205ENST00000487496 MRPS5P82675 430 aaKnown RBP12.83□□□□□ -0.36
SPEN-205ENST00000487496 CDC42EP1Q00587 391 aa12.83□□□□□ -0.36
SPEN-205ENST00000487496 DSC3Q14574 896 aa12.83□□□□□ -0.36
SPEN-205ENST00000487496 C4orf19Q8IY42 314 aa12.83□□□□□ -0.36
SPEN-205ENST00000487496 CMTR2Q8IYT2 770 aaKnown RBP12.83□□□□□ -0.36
SPEN-205ENST00000487496 ZNF579Q8NAF0 562 aaKnown RBP12.83□□□□□ -0.36
SPEN-205ENST00000487496 FAM184AQ8NB25 1140 aa12.83□□□□□ -0.36
SPEN-205ENST00000487496 NLRP7Q8WX94 980 aa12.83□□□□□ -0.36
SPEN-205ENST00000487496 DYDC2Q96IM9 177 aa12.83□□□□□ -0.36
SPEN-205ENST00000487496 ASB2Q96Q27 587 aa12.83□□□□□ -0.36
SPEN-205ENST00000487496 MTMR9Q96QG7 549 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms