RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 ELAC1Q9H777 363 aaKnown RBP13.56□□□□□ -0.24
TRIM56-204ENST00000487252 SPATA6Q9NWH7 488 aaPredicted RBP13.56□□□□□ -0.24
TRIM56-204ENST00000487252 TMEM161AQ9NX61 479 aa13.56□□□□□ -0.24
TRIM56-204ENST00000487252 SPATA31C2B4DYI2 1134 aa13.55□□□□□ -0.24
TRIM56-204ENST00000487252 TAF4O00268 1085 aa13.55□□□□□ -0.24
TRIM56-204ENST00000487252 CFBP00751 764 aa13.55□□□□□ -0.24
TRIM56-204ENST00000487252 FGFR1P11362 822 aa13.55□□□□□ -0.24
TRIM56-204ENST00000487252 PBX3P40426 434 aa13.55□□□□□ -0.24
TRIM56-204ENST00000487252 RING1Q06587 406 aa13.55□□□□□ -0.24
TRIM56-204ENST00000487252 ZKSCAN2Q63HK3 967 aa13.55□□□□□ -0.24
TRIM56-204ENST00000487252 CABP7Q86V35 215 aa13.55□□□□□ -0.24
TRIM56-204ENST00000487252 GLG1Q92896 1179 aa13.55□□□□□ -0.24
TRIM56-204ENST00000487252 MAP4K1Q92918 833 aa13.55□□□□□ -0.24
TRIM56-204ENST00000487252 INPP4AQ96PE3 977 aaPredicted RBP13.55□□□□□ -0.24
TRIM56-204ENST00000487252 BCO2Q9BYV7 579 aa13.55□□□□□ -0.24
TRIM56-204ENST00000487252 RHOBTB2Q9BYZ6 727 aa13.55□□□□□ -0.24
TRIM56-204ENST00000487252 CELF4Q9BZC1 486 aaKnown RBP13.55□□□□□ -0.24
TRIM56-204ENST00000487252 OSBPL6Q9BZF3 934 aa13.55□□□□□ -0.24
TRIM56-204ENST00000487252 UBA5Q9GZZ9 404 aa13.55□□□□□ -0.24
TRIM56-204ENST00000487252 TMEM117Q9H0C3 514 aa13.55□□□□□ -0.24
TRIM56-204ENST00000487252 RNF19AQ9NV58 838 aa13.55□□□□□ -0.24
TRIM56-204ENST00000487252 NAV2Q8IVL1 2488 aa13.55□□□□□ -0.24
TRIM56-204ENST00000487252 LAMA4Q16363 1823 aa13.55□□□□□ -0.24
TRIM56-204ENST00000487252 GDF9O60383 454 aa13.54□□□□□ -0.24
TRIM56-204ENST00000487252 CXCL14O95715 111 aa13.54□□□□□ -0.24
TRIM56-204ENST00000487252 PTPN14Q15678 1187 aa13.54□□□□□ -0.24
TRIM56-204ENST00000487252 CSRP2Q16527 193 aa13.54□□□□□ -0.24
TRIM56-204ENST00000487252 QRICH1Q2TAL8 776 aa13.54□□□□□ -0.24
TRIM56-204ENST00000487252 UTP14CQ5TAP6 766 aaKnown RBP13.54□□□□□ -0.24
TRIM56-204ENST00000487252 LAIR1Q6GTX8 287 aa13.54□□□□□ -0.24
TRIM56-204ENST00000487252 PRR23CQ6ZRP0 262 aa13.54□□□□□ -0.24
TRIM56-204ENST00000487252 SAMD3Q8N6K7 520 aa13.54□□□□□ -0.24
TRIM56-204ENST00000487252 ZFP91Q96JP5 570 aaPredicted RBP13.54□□□□□ -0.24
TRIM56-204ENST00000487252 TTC14Q96N46 770 aa13.54□□□□□ -0.24
TRIM56-204ENST00000487252 ADAM2Q99965 735 aa13.54□□□□□ -0.24
TRIM56-204ENST00000487252 FAM126AQ9BYI3 521 aaPredicted RBP13.54□□□□□ -0.24
TRIM56-204ENST00000487252 ZBP1Q9H171 429 aa13.54□□□□□ -0.24
TRIM56-204ENST00000487252 PRMT8Q9NR22 394 aaPredicted RBP13.54□□□□□ -0.24
TRIM56-204ENST00000487252 SEMA4GQ9NTN9 838 aa13.54□□□□□ -0.24
TRIM56-204ENST00000487252 COL4A3Q01955 1670 aa13.53□□□□□ -0.24
TRIM56-204ENST00000487252 AKAP13Q12802 2813 aa13.53□□□□□ -0.24
TRIM56-204ENST00000487252 KANSL1LA0AUZ9 987 aa13.53□□□□□ -0.24
TRIM56-204ENST00000487252 SRRM3A6NNA2 597 aaPredicted RBP13.53□□□□□ -0.24
TRIM56-204ENST00000487252 ANHXE9PGG2 379 aa13.53□□□□□ -0.24
TRIM56-204ENST00000487252 RAB11FIP3O75154 756 aa13.53□□□□□ -0.24
TRIM56-204ENST00000487252 RETP07949 1114 aa13.53□□□□□ -0.24
TRIM56-204ENST00000487252 GOLGA8HP0CJ92 632 aa13.53□□□□□ -0.24
TRIM56-204ENST00000487252 RLBP1P12271 317 aa13.53□□□□□ -0.24
TRIM56-204ENST00000487252 CCND2P30279 289 aa13.53□□□□□ -0.24
TRIM56-204ENST00000487252 MAGEA9P43362 315 aa13.53□□□□□ -0.24
TRIM56-204ENST00000487252 LIMK1P53667 647 aa13.53□□□□□ -0.24
TRIM56-204ENST00000487252 MRPS9P82933 396 aaKnown RBP13.53□□□□□ -0.24
TRIM56-204ENST00000487252 GIT2Q14161 759 aa13.53□□□□□ -0.24
TRIM56-204ENST00000487252 TMEM266Q2M3C6 531 aa13.53□□□□□ -0.24
TRIM56-204ENST00000487252 ADGRF4Q8IZF3 695 aa13.53□□□□□ -0.24
TRIM56-204ENST00000487252 LRRC43Q8N309 656 aa13.53□□□□□ -0.24
TRIM56-204ENST00000487252 CMASQ8NFW8 434 aaPredicted RBP13.53□□□□□ -0.24
TRIM56-204ENST00000487252 ZBTB10Q96DT7 871 aa13.53□□□□□ -0.24
TRIM56-204ENST00000487252 SHDQ96IW2 340 aa13.53□□□□□ -0.24
TRIM56-204ENST00000487252 FAM49AQ9H0Q0 323 aaPredicted RBP13.53□□□□□ -0.24
TRIM56-204ENST00000487252 ATP6V0A4Q9HBG4 840 aa13.53□□□□□ -0.24
TRIM56-204ENST00000487252 LHX6Q9UPM6 363 aa13.53□□□□□ -0.24
TRIM56-204ENST00000487252 IGSF10Q6WRI0 2623 aa13.53□□□□□ -0.24
TRIM56-204ENST00000487252 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.52□□□□□ -0.25
TRIM56-204ENST00000487252 TMEM8BA6NDV4 472 aa13.52□□□□□ -0.25
TRIM56-204ENST00000487252 M0QZ92 97 aa13.52□□□□□ -0.25
TRIM56-204ENST00000487252 TDGF1P13385 188 aa13.52□□□□□ -0.25
TRIM56-204ENST00000487252 TMEM62Q0P6H9 643 aa13.52□□□□□ -0.25
TRIM56-204ENST00000487252 WTAPQ15007 396 aa13.52□□□□□ -0.25
TRIM56-204ENST00000487252 PPFIBP1Q86W92 1011 aa13.52□□□□□ -0.25
TRIM56-204ENST00000487252 CLDN23Q96B33 292 aa13.52□□□□□ -0.25
TRIM56-204ENST00000487252 MYADMQ96S97 322 aa13.52□□□□□ -0.25
TRIM56-204ENST00000487252 SEC62Q99442 399 aaKnown RBP13.52□□□□□ -0.25
TRIM56-204ENST00000487252 SENP7Q9BQF6 1050 aa13.52□□□□□ -0.25
TRIM56-204ENST00000487252 WDR6Q9NNW5 1121 aaKnown RBP13.52□□□□□ -0.25
TRIM56-204ENST00000487252 ERAP1Q9NZ08 941 aa13.52□□□□□ -0.25
TRIM56-204ENST00000487252 WASF3Q9UPY6 502 aa13.52□□□□□ -0.25
TRIM56-204ENST00000487252 MTF2Q9Y483 593 aaPredicted RBP13.52□□□□□ -0.25
TRIM56-204ENST00000487252 PCDHA2Q9Y5H9 948 aa13.52□□□□□ -0.25
TRIM56-204ENST00000487252 FRMPD4Q14CM0 1322 aa13.52□□□□□ -0.25
TRIM56-204ENST00000487252 RALGAPA1Q6GYQ0 2036 aa13.52□□□□□ -0.25
TRIM56-204ENST00000487252 DENND3A2RUS2 1198 aa13.51□□□□□ -0.25
TRIM56-204ENST00000487252 RRN3P2A6NIE6 340 aa13.51□□□□□ -0.25
TRIM56-204ENST00000487252 FOXD2O60548 495 aaPredicted RBP13.51□□□□□ -0.25
TRIM56-204ENST00000487252 STAM2O75886 525 aa13.51□□□□□ -0.25
TRIM56-204ENST00000487252 ZIC2O95409 532 aaPredicted RBP13.51□□□□□ -0.25
TRIM56-204ENST00000487252 PAPLNO95428 1278 aa13.51□□□□□ -0.25
TRIM56-204ENST00000487252 CTSAP10619 480 aa13.51□□□□□ -0.25
TRIM56-204ENST00000487252 TCF7P36402 384 aaPredicted RBP13.51□□□□□ -0.25
TRIM56-204ENST00000487252 NFX1Q12986 1120 aaKnown RBP13.51□□□□□ -0.25
TRIM56-204ENST00000487252 BMS1Q14692 1282 aaKnown RBP13.51□□□□□ -0.25
TRIM56-204ENST00000487252 GNPTABQ3T906 1256 aa13.51□□□□□ -0.25
TRIM56-204ENST00000487252 ITPRIPQ8IWB1 547 aa13.51□□□□□ -0.25
TRIM56-204ENST00000487252 VPS52Q8N1B4 723 aa13.51□□□□□ -0.25
TRIM56-204ENST00000487252 JMJD4Q9H9V9 463 aa13.51□□□□□ -0.25
TRIM56-204ENST00000487252 NOC2LQ9Y3T9 749 aaKnown RBP13.51□□□□□ -0.25
TRIM56-204ENST00000487252 PCDHA1Q9Y5I3 950 aa13.51□□□□□ -0.25
TRIM56-204ENST00000487252 U3KPZ7 1027 aaPredicted RBP13.51□□□□□ -0.25
TRIM56-204ENST00000487252 HOXA2O43364 376 aa13.5□□□□□ -0.25
TRIM56-204ENST00000487252 FIBPO43427 364 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms