RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 GTF3C6Q969F1 213 aa21.51■■□□□ 1.03
CLIP2-206ENST00000487091 FAM20AQ96MK3 541 aa21.51■■□□□ 1.03
CLIP2-206ENST00000487091 NAP1L4Q99733 375 aaKnown RBP21.51■■□□□ 1.03
CLIP2-206ENST00000487091 RNF216Q9NWF9 866 aaPredicted RBP21.51■■□□□ 1.03
CLIP2-206ENST00000487091 VTNP04004 478 aa21.5■■□□□ 1.03
CLIP2-206ENST00000487091 CTNNB1P35222 781 aa21.5■■□□□ 1.03
CLIP2-206ENST00000487091 CLCN3P51790 818 aa21.5■■□□□ 1.03
CLIP2-206ENST00000487091 TARBP2Q15633 366 aaKnown RBP21.5■■□□□ 1.03
CLIP2-206ENST00000487091 CMTR2Q8IYT2 770 aaKnown RBP21.5■■□□□ 1.03
CLIP2-206ENST00000487091 NECAB1Q8N987 351 aa21.5■■□□□ 1.03
CLIP2-206ENST00000487091 MAP7D2Q96T17 732 aa21.5■■□□□ 1.03
CLIP2-206ENST00000487091 OSMRQ99650 979 aa21.5■■□□□ 1.03
CLIP2-206ENST00000487091 NIFKQ9BYG3 293 aaKnown RBP21.5■■□□□ 1.03
CLIP2-206ENST00000487091 C1orf112Q9NSG2 853 aa21.5■■□□□ 1.03
CLIP2-206ENST00000487091 GJB4Q9NTQ9 266 aa21.5■■□□□ 1.03
CLIP2-206ENST00000487091 ST3GAL5Q9UNP4 418 aa21.5■■□□□ 1.03
CLIP2-206ENST00000487091 XIRP2A4UGR9 3374 aa21.5■■□□□ 1.03
CLIP2-206ENST00000487091 TCF20Q9UGU0 1960 aaKnown RBP21.49■■□□□ 1.03
CLIP2-206ENST00000487091 TNFRSF10AO00220 468 aa21.49■■□□□ 1.03
CLIP2-206ENST00000487091 SLC37A4O43826 429 aa21.49■■□□□ 1.03
CLIP2-206ENST00000487091 LARGE1O95461 756 aa21.49■■□□□ 1.03
CLIP2-206ENST00000487091 SEC24BO95487 1268 aa21.49■■□□□ 1.03
CLIP2-206ENST00000487091 FDPSP14324 419 aaKnown RBP21.49■■□□□ 1.03
CLIP2-206ENST00000487091 SARSP49591 514 aaKnown RBP21.49■■□□□ 1.03
CLIP2-206ENST00000487091 TIGD5Q53EQ6 642 aa21.49■■□□□ 1.03
CLIP2-206ENST00000487091 XKR3Q5GH77 459 aa21.49■■□□□ 1.03
CLIP2-206ENST00000487091 OXER1Q8TDS5 423 aa21.49■■□□□ 1.03
CLIP2-206ENST00000487091 C11orf84Q9BUA3 381 aaPredicted RBP21.49■■□□□ 1.03
CLIP2-206ENST00000487091 PLVAPQ9BX97 442 aa21.49■■□□□ 1.03
CLIP2-206ENST00000487091 KCNMB3Q9NPA1 279 aa21.49■■□□□ 1.03
CLIP2-206ENST00000487091 RGS18Q9NS28 235 aa21.49■■□□□ 1.03
CLIP2-206ENST00000487091 AKT3Q9Y243 479 aa21.49■■□□□ 1.03
CLIP2-206ENST00000487091 TBX3O15119 743 aa21.48■■□□□ 1.03
CLIP2-206ENST00000487091 MGEA5O60502 916 aa21.48■■□□□ 1.03
CLIP2-206ENST00000487091 STBD1O95210 358 aa21.48■■□□□ 1.03
CLIP2-206ENST00000487091 KCNQ1P51787 676 aa21.48■■□□□ 1.03
CLIP2-206ENST00000487091 NLRP11P59045 1033 aaKnown RBP21.48■■□□□ 1.03
CLIP2-206ENST00000487091 TBC1D8BQ0IIM8 1120 aa21.48■■□□□ 1.03
CLIP2-206ENST00000487091 PIK3AP1Q6ZUJ8 805 aa21.48■■□□□ 1.03
CLIP2-206ENST00000487091 FAM228AQ86W67 206 aa21.48■■□□□ 1.03
CLIP2-206ENST00000487091 LRRC71Q8N4P6 559 aa21.48■■□□□ 1.03
CLIP2-206ENST00000487091 PPP1R16BQ96T49 567 aa21.48■■□□□ 1.03
CLIP2-206ENST00000487091 UHRF1Q96T88 793 aaPredicted RBP21.48■■□□□ 1.03
CLIP2-206ENST00000487091 ADAM2Q99965 735 aa21.48■■□□□ 1.03
CLIP2-206ENST00000487091 LMAN2LQ9H0V9 348 aa21.48■■□□□ 1.03
CLIP2-206ENST00000487091 ADAMTS10Q9H324 1103 aa21.48■■□□□ 1.03
CLIP2-206ENST00000487091 LRFN2Q9ULH4 789 aa21.48■■□□□ 1.03
CLIP2-206ENST00000487091 MYO7AQ13402 2215 aa21.47■■□□□ 1.03
CLIP2-206ENST00000487091 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.47■■□□□ 1.03
CLIP2-206ENST00000487091 DENND3A2RUS2 1198 aa21.47■■□□□ 1.03
CLIP2-206ENST00000487091 DTNBO60941 627 aa21.47■■□□□ 1.03
CLIP2-206ENST00000487091 PPP2R5CQ13362 524 aa21.47■■□□□ 1.03
CLIP2-206ENST00000487091 SLC24A5Q71RS6 500 aa21.47■■□□□ 1.03
CLIP2-206ENST00000487091 BANK1Q8NDB2 785 aa21.47■■□□□ 1.03
CLIP2-206ENST00000487091 NSUN7Q8NE18 718 aaKnown RBP21.47■■□□□ 1.03
CLIP2-206ENST00000487091 CEP89Q96ST8 783 aa21.47■■□□□ 1.03
CLIP2-206ENST00000487091 BRMS1Q9HCU9 246 aa21.47■■□□□ 1.03
CLIP2-206ENST00000487091 PCDHB7Q9Y5E2 793 aa21.47■■□□□ 1.03
CLIP2-206ENST00000487091 C9IYK1 514 aa21.46■■□□□ 1.03
CLIP2-206ENST00000487091 CCNT1O60563 726 aaKnown RBP21.46■■□□□ 1.03
CLIP2-206ENST00000487091 EIF4BP23588 611 aaKnown RBP21.46■■□□□ 1.03
CLIP2-206ENST00000487091 KRT2P35908 639 aa21.46■■□□□ 1.03
CLIP2-206ENST00000487091 PSMC5P62195 406 aa21.46■■□□□ 1.03
CLIP2-206ENST00000487091 NAALADL2Q58DX5 795 aa21.46■■□□□ 1.03
CLIP2-206ENST00000487091 P2RX5Q93086 422 aa21.46■■□□□ 1.03
CLIP2-206ENST00000487091 SEPT9Q9UHD8 586 aaPredicted RBP21.46■■□□□ 1.03
CLIP2-206ENST00000487091 VAV3Q9UKW4 847 aa21.46■■□□□ 1.03
CLIP2-206ENST00000487091 MRPL42Q9Y6G3 142 aaKnown RBP21.46■■□□□ 1.03
CLIP2-206ENST00000487091 IGKV6-21A0A0C4DH24 114 aa21.45■■□□□ 1.02
CLIP2-206ENST00000487091 EML1O00423 815 aa21.45■■□□□ 1.02
CLIP2-206ENST00000487091 DKC1O60832 514 aaKnown RBP eCLIP21.45■■□□□ 1.02
CLIP2-206ENST00000487091 GPC3P51654 580 aa21.45■■□□□ 1.02
CLIP2-206ENST00000487091 FAM189BP81408 668 aa21.45■■□□□ 1.02
CLIP2-206ENST00000487091 CDC42EP1Q00587 391 aa21.45■■□□□ 1.02
CLIP2-206ENST00000487091 DSC3Q14574 896 aa21.45■■□□□ 1.02
CLIP2-206ENST00000487091 MTERF2Q49AM1 385 aa21.45■■□□□ 1.02
CLIP2-206ENST00000487091 EARS2Q5JPH6 523 aaKnown RBP21.45■■□□□ 1.02
CLIP2-206ENST00000487091 TNFRSF25Q93038 417 aa21.45■■□□□ 1.02
CLIP2-206ENST00000487091 NSUN3Q9H649 340 aaKnown RBP21.45■■□□□ 1.02
CLIP2-206ENST00000487091 UBE2ZQ9H832 354 aaPredicted RBP21.45■■□□□ 1.02
CLIP2-206ENST00000487091 MUC3AQ02505 3323 aa21.44■■□□□ 1.02
CLIP2-206ENST00000487091 DDX11L8A8MPP1 907 aa21.44■■□□□ 1.02
CLIP2-206ENST00000487091 GRM6O15303 877 aa21.44■■□□□ 1.02
CLIP2-206ENST00000487091 QARSP47897 775 aaKnown RBP21.44■■□□□ 1.02
CLIP2-206ENST00000487091 NR5A1Q13285 461 aa21.44■■□□□ 1.02
CLIP2-206ENST00000487091 HAS1Q92839 578 aa21.44■■□□□ 1.02
CLIP2-206ENST00000487091 ELAC1Q9H777 363 aaKnown RBP21.44■■□□□ 1.02
CLIP2-206ENST00000487091 MARCH6O60337 910 aa21.43■■□□□ 1.02
CLIP2-206ENST00000487091 P4HBP07237 508 aaKnown RBP21.43■■□□□ 1.02
CLIP2-206ENST00000487091 DARSP14868 501 aaKnown RBP21.43■■□□□ 1.02
CLIP2-206ENST00000487091 DNM2P50570 870 aa21.43■■□□□ 1.02
CLIP2-206ENST00000487091 PAN2Q504Q3 1202 aaKnown RBP21.43■■□□□ 1.02
CLIP2-206ENST00000487091 TCEAL5Q5H9L2 206 aa21.43■■□□□ 1.02
CLIP2-206ENST00000487091 SLFN12Q8IYM2 578 aa21.43■■□□□ 1.02
CLIP2-206ENST00000487091 TMEM161AQ9NX61 479 aa21.43■■□□□ 1.02
CLIP2-206ENST00000487091 PLAGL2Q9UPG8 496 aa21.43■■□□□ 1.02
CLIP2-206ENST00000487091 FNDC1Q4ZHG4 1894 aaPredicted RBP21.43■■□□□ 1.02
CLIP2-206ENST00000487091 NCK2O43639 380 aa21.42■■□□□ 1.02
CLIP2-206ENST00000487091 JAK2O60674 1132 aa21.42■■□□□ 1.02
CLIP2-206ENST00000487091 MAFO75444 373 aaPredicted RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms