RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 CASKIN1Q8WXD9 1431 aa5.16□□□□□ -1.58
PTCD3-216ENST00000487043 PRG4Q92954 1404 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-216ENST00000487043 TCAF2A6NFQ2 919 aa5.16□□□□□ -1.58
PTCD3-216ENST00000487043 PRAMEF25A6NGN4 478 aa5.16□□□□□ -1.58
PTCD3-216ENST00000487043 FAM90A27PA6NNH2 459 aa5.16□□□□□ -1.58
PTCD3-216ENST00000487043 HGSO14964 777 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-216ENST00000487043 PTPN1P18031 435 aaKnown RBP5.16□□□□□ -1.58
PTCD3-216ENST00000487043 HDAC1Q13547 482 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-216ENST00000487043 ARHGAP29Q52LW3 1261 aa5.16□□□□□ -1.58
PTCD3-216ENST00000487043 BICRALQ6AI39 1079 aa5.16□□□□□ -1.58
PTCD3-216ENST00000487043 ATG14Q6ZNE5 492 aa5.16□□□□□ -1.58
PTCD3-216ENST00000487043 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-216ENST00000487043 CABP7Q86V35 215 aa5.16□□□□□ -1.58
PTCD3-216ENST00000487043 ABHD4Q8TB40 342 aa5.16□□□□□ -1.58
PTCD3-216ENST00000487043 ERCC4Q92889 916 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-216ENST00000487043 ZNF496Q96IT1 587 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-216ENST00000487043 TEKT5Q96M29 485 aa5.16□□□□□ -1.58
PTCD3-216ENST00000487043 MPHOSPH6Q99547 160 aaKnown RBP5.16□□□□□ -1.58
PTCD3-216ENST00000487043 ANO3Q9BYT9 981 aa5.16□□□□□ -1.58
PTCD3-216ENST00000487043 KCNK12Q9HB15 430 aa5.16□□□□□ -1.58
PTCD3-216ENST00000487043 RXFP1Q9HBX9 757 aa5.16□□□□□ -1.58
PTCD3-216ENST00000487043 CHST12Q9NRB3 414 aa5.16□□□□□ -1.58
PTCD3-216ENST00000487043 DNAJC28Q9NX36 388 aa5.16□□□□□ -1.58
PTCD3-216ENST00000487043 MYOTQ9UBF9 498 aa5.16□□□□□ -1.58
PTCD3-216ENST00000487043 KCNG1Q9UIX4 513 aa5.16□□□□□ -1.58
PTCD3-216ENST00000487043 ACSL6Q9UKU0 697 aa5.16□□□□□ -1.58
PTCD3-216ENST00000487043 SIT1Q9Y3P8 196 aa5.16□□□□□ -1.58
PTCD3-216ENST00000487043 NCANO14594 1321 aa5.16□□□□□ -1.58
PTCD3-216ENST00000487043 SHROOM2Q13796 1616 aa5.15□□□□□ -1.58
PTCD3-216ENST00000487043 MAP3K1Q13233 1512 aa5.15□□□□□ -1.58
PTCD3-216ENST00000487043 NRDCO43847 1150 aa5.15□□□□□ -1.59
PTCD3-216ENST00000487043 TADA3O75528 432 aa5.15□□□□□ -1.59
PTCD3-216ENST00000487043 C4BPAP04003 597 aaKnown RBP5.15□□□□□ -1.59
PTCD3-216ENST00000487043 KRT1P04264 644 aa5.15□□□□□ -1.59
PTCD3-216ENST00000487043 CLEC2LP0C7M8 214 aa5.15□□□□□ -1.59
PTCD3-216ENST00000487043 VCAM1P19320 739 aa5.15□□□□□ -1.59
PTCD3-216ENST00000487043 LPOP22079 712 aaPredicted RBP5.15□□□□□ -1.59
PTCD3-216ENST00000487043 GJA4P35212 333 aa5.15□□□□□ -1.59
PTCD3-216ENST00000487043 EPHA5P54756 1037 aa5.15□□□□□ -1.59
PTCD3-216ENST00000487043 CYP4F8P98187 520 aa5.15□□□□□ -1.59
PTCD3-216ENST00000487043 SRSF2Q01130 221 aaKnown RBP5.15□□□□□ -1.59
PTCD3-216ENST00000487043 CHRNEQ04844 493 aa5.15□□□□□ -1.59
PTCD3-216ENST00000487043 GRIN1Q05586 938 aa5.15□□□□□ -1.59
PTCD3-216ENST00000487043 OS9Q13438 667 aaPredicted RBP5.15□□□□□ -1.59
PTCD3-216ENST00000487043 GTF2H3Q13889 308 aa5.15□□□□□ -1.59
PTCD3-216ENST00000487043 KCNA10Q16322 511 aa5.15□□□□□ -1.59
PTCD3-216ENST00000487043 CT83Q5H943 113 aa5.15□□□□□ -1.59
PTCD3-216ENST00000487043 EMC4Q5J8M3 183 aa5.15□□□□□ -1.59
PTCD3-216ENST00000487043 TOR2AQ5JU69 321 aa5.15□□□□□ -1.59
PTCD3-216ENST00000487043 CATSPEREQ5SY80 951 aa5.15□□□□□ -1.59
PTCD3-216ENST00000487043 CIAPIN1Q6FI81 312 aa5.15□□□□□ -1.59
PTCD3-216ENST00000487043 CYP4F22Q6NT55 531 aa5.15□□□□□ -1.59
PTCD3-216ENST00000487043 TTLL10Q6ZVT0 673 aa5.15□□□□□ -1.59
PTCD3-216ENST00000487043 EPM2AIP1Q7L775 607 aaPredicted RBP5.15□□□□□ -1.59
PTCD3-216ENST00000487043 SPPL2CQ8IUH8 684 aa5.15□□□□□ -1.59
PTCD3-216ENST00000487043 OXR1Q8N573 874 aa5.15□□□□□ -1.59
PTCD3-216ENST00000487043 CLEC4DQ8WXI8 215 aa5.15□□□□□ -1.59
PTCD3-216ENST00000487043 JADE3Q92613 823 aa5.15□□□□□ -1.59
PTCD3-216ENST00000487043 TIFAQ96CG3 184 aa5.15□□□□□ -1.59
PTCD3-216ENST00000487043 C16orf92Q96LL3 132 aa5.15□□□□□ -1.59
PTCD3-216ENST00000487043 ACAP3Q96P50 834 aa5.15□□□□□ -1.59
PTCD3-216ENST00000487043 QRSL1Q9H0R6 528 aaKnown RBP5.15□□□□□ -1.59
PTCD3-216ENST00000487043 SEMA4AQ9H3S1 761 aa5.15□□□□□ -1.59
PTCD3-216ENST00000487043 PRDM11Q9NQV5 511 aa5.15□□□□□ -1.59
PTCD3-216ENST00000487043 ANLNQ9NQW6 1124 aa5.15□□□□□ -1.59
PTCD3-216ENST00000487043 ASH2LQ9UBL3 628 aa5.15□□□□□ -1.59
PTCD3-216ENST00000487043 RCAN3Q9UKA8 241 aa5.15□□□□□ -1.59
PTCD3-216ENST00000487043 EDARQ9UNE0 448 aa5.15□□□□□ -1.59
PTCD3-216ENST00000487043 PCDHB4Q9Y5E5 795 aa5.15□□□□□ -1.59
PTCD3-216ENST00000487043 FYCO1Q9BQS8 1478 aa5.14□□□□□ -1.59
PTCD3-216ENST00000487043 RASSF10A6NK89 507 aa5.14□□□□□ -1.59
PTCD3-216ENST00000487043 NOTOA8MTQ0 251 aa5.14□□□□□ -1.59
PTCD3-216ENST00000487043 FOXP2O15409 715 aa5.14□□□□□ -1.59
PTCD3-216ENST00000487043 ZRANB2O95218 330 aaKnown RBP eCLIP5.14□□□□□ -1.595e-6■□□□□ 9.3
PTCD3-216ENST00000487043 APOL3O95236 402 aa5.14□□□□□ -1.59
PTCD3-216ENST00000487043 GLI4P10075 376 aa5.14□□□□□ -1.59
PTCD3-216ENST00000487043 OSMP13725 252 aa5.14□□□□□ -1.59
PTCD3-216ENST00000487043 ENPP1P22413 925 aa5.14□□□□□ -1.59
PTCD3-216ENST00000487043 SDHAP31040 664 aa5.14□□□□□ -1.59
PTCD3-216ENST00000487043 SLC6A11P48066 632 aa5.14□□□□□ -1.59
PTCD3-216ENST00000487043 FNTBP49356 437 aa5.14□□□□□ -1.59
PTCD3-216ENST00000487043 ADCY1Q08828 1119 aa5.14□□□□□ -1.59
PTCD3-216ENST00000487043 BRD3Q15059 726 aa5.14□□□□□ -1.59
PTCD3-216ENST00000487043 EPHA7Q15375 998 aa5.14□□□□□ -1.59
PTCD3-216ENST00000487043 IFIT1BQ5T764 474 aaKnown RBP5.14□□□□□ -1.59
PTCD3-216ENST00000487043 MILR1Q7Z6M3 343 aa5.14□□□□□ -1.59
PTCD3-216ENST00000487043 CXorf67Q86X51 503 aaPredicted RBP5.14□□□□□ -1.59
PTCD3-216ENST00000487043 DCP2Q8IU60 420 aaKnown RBP5.14□□□□□ -1.59
PTCD3-216ENST00000487043 SIRT2Q8IXJ6 389 aa5.14□□□□□ -1.59
PTCD3-216ENST00000487043 PDZD8Q8NEN9 1154 aa5.14□□□□□ -1.59
PTCD3-216ENST00000487043 PHOSPHO1Q8TCT1 267 aa5.14□□□□□ -1.59
PTCD3-216ENST00000487043 SEC14L1Q92503 715 aa5.14□□□□□ -1.59
PTCD3-216ENST00000487043 EAF2Q96CJ1 260 aaPredicted RBP5.14□□□□□ -1.59
PTCD3-216ENST00000487043 AP5M1Q9H0R1 490 aa5.14□□□□□ -1.59
PTCD3-216ENST00000487043 SAP30BPQ9UHR5 308 aaKnown RBP5.14□□□□□ -1.59
PTCD3-216ENST00000487043 PALD1Q9ULE6 856 aa5.14□□□□□ -1.59
PTCD3-216ENST00000487043 PTPRGP23470 1445 aa5.14□□□□□ -1.59
PTCD3-216ENST00000487043 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.13□□□□□ -1.59
PTCD3-216ENST00000487043 FITM1A5D6W6 292 aa5.13□□□□□ -1.59
PTCD3-216ENST00000487043 SGSM2O43147 1006 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms