RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 AMHP03971 560 aa20.36■□□□□ 0.85
COL1A1-207ENST00000486572 CD52P31358 61 aa20.36■□□□□ 0.85
COL1A1-207ENST00000486572 FXR2P51116 673 aaKnown RBP eCLIP20.36■□□□□ 0.85
COL1A1-207ENST00000486572 RABGGTBP53611 331 aa20.36■□□□□ 0.85
COL1A1-207ENST00000486572 NPEPPSP55786 919 aa20.36■□□□□ 0.85
COL1A1-207ENST00000486572 KIZQ2M2Z5 673 aa20.36■□□□□ 0.85
COL1A1-207ENST00000486572 BRAPQ7Z569 592 aa20.36■□□□□ 0.85
COL1A1-207ENST00000486572 ZNF710Q8N1W2 664 aa20.36■□□□□ 0.85
COL1A1-207ENST00000486572 ERMNQ8TAM6 284 aa20.36■□□□□ 0.85
COL1A1-207ENST00000486572 CEP170P1Q96L14 293 aa20.36■□□□□ 0.85
COL1A1-207ENST00000486572 PPP1R16BQ96T49 567 aa20.36■□□□□ 0.85
COL1A1-207ENST00000486572 JPH2Q9BR39 696 aaPredicted RBP20.36■□□□□ 0.85
COL1A1-207ENST00000486572 GBF1Q92538 1859 aa20.36■□□□□ 0.85
COL1A1-207ENST00000486572 GPR32O75388 356 aa20.35■□□□□ 0.85
COL1A1-207ENST00000486572 SLC34A2O95436 690 aa20.35■□□□□ 0.85
COL1A1-207ENST00000486572 SYT1P21579 422 aa20.35■□□□□ 0.85
COL1A1-207ENST00000486572 RFC5P40937 340 aa20.35■□□□□ 0.85
COL1A1-207ENST00000486572 DNM2P50570 870 aa20.35■□□□□ 0.85
COL1A1-207ENST00000486572 CRYBB1P53674 252 aaPredicted RBP20.35■□□□□ 0.85
COL1A1-207ENST00000486572 PAK2Q13177 524 aa20.35■□□□□ 0.85
COL1A1-207ENST00000486572 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.35■□□□□ 0.85
COL1A1-207ENST00000486572 EXOC8Q8IYI6 725 aa20.35■□□□□ 0.85
COL1A1-207ENST00000486572 SLC7A3Q8WY07 619 aa20.35■□□□□ 0.85
COL1A1-207ENST00000486572 TTYH1Q9H313 450 aaPredicted RBP20.35■□□□□ 0.85
COL1A1-207ENST00000486572 CDHR5Q9HBB8 845 aa20.35■□□□□ 0.85
COL1A1-207ENST00000486572 TUFT1Q9NNX1 390 aa20.35■□□□□ 0.85
COL1A1-207ENST00000486572 YBX2Q9Y2T7 364 aaKnown RBP20.35■□□□□ 0.85
COL1A1-207ENST00000486572 ARID2Q68CP9 1835 aa20.34■□□□□ 0.85
COL1A1-207ENST00000486572 PRPHP41219 470 aa20.34■□□□□ 0.85
COL1A1-207ENST00000486572 POLGP54098 1239 aaPredicted RBP20.34■□□□□ 0.85
COL1A1-207ENST00000486572 NLRP11P59045 1033 aaKnown RBP20.34■□□□□ 0.85
COL1A1-207ENST00000486572 DRP2Q13474 957 aa20.34■□□□□ 0.85
COL1A1-207ENST00000486572 XKR9Q5GH70 373 aa20.34■□□□□ 0.85
COL1A1-207ENST00000486572 HAUS3Q68CZ6 603 aa20.34■□□□□ 0.85
COL1A1-207ENST00000486572 TMCO2Q7Z6W1 182 aaPredicted RBP20.34■□□□□ 0.85
COL1A1-207ENST00000486572 FERMT3Q86UX7 667 aa20.34■□□□□ 0.85
COL1A1-207ENST00000486572 MYOCDQ8IZQ8 938 aa20.34■□□□□ 0.85
COL1A1-207ENST00000486572 ZNF579Q8NAF0 562 aaKnown RBP20.34■□□□□ 0.85
COL1A1-207ENST00000486572 TMEM40Q8WWA1 233 aa20.34■□□□□ 0.85
COL1A1-207ENST00000486572 FAM161BQ96MY7 647 aa20.34■□□□□ 0.85
COL1A1-207ENST00000486572 OSMRQ99650 979 aa20.34■□□□□ 0.85
COL1A1-207ENST00000486572 POLR3CQ9BUI4 534 aaPredicted RBP20.34■□□□□ 0.85
COL1A1-207ENST00000486572 RAB34Q9BZG1 259 aa20.34■□□□□ 0.85
COL1A1-207ENST00000486572 NKX2-4Q9H2Z4 354 aa20.34■□□□□ 0.85
COL1A1-207ENST00000486572 PADI3Q9ULW8 664 aa20.34■□□□□ 0.85
COL1A1-207ENST00000486572 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.33■□□□□ 0.85
COL1A1-207ENST00000486572 ZBTB39O15060 712 aa20.33■□□□□ 0.85
COL1A1-207ENST00000486572 RPS6KA5O75582 802 aa20.33■□□□□ 0.85
COL1A1-207ENST00000486572 GJB5O95377 273 aa20.33■□□□□ 0.85
COL1A1-207ENST00000486572 SPATA31C1P0DKV0 1188 aa20.33■□□□□ 0.85
COL1A1-207ENST00000486572 MYOGP15173 224 aa20.33■□□□□ 0.85
COL1A1-207ENST00000486572 GPC3P51654 580 aa20.33■□□□□ 0.85
COL1A1-207ENST00000486572 ATP2C1P98194 919 aaPredicted RBP20.33■□□□□ 0.85
COL1A1-207ENST00000486572 CATSPER3Q86XQ3 398 aa20.33■□□□□ 0.85
COL1A1-207ENST00000486572 CCDC43Q96MW1 224 aaKnown RBP20.33■□□□□ 0.85
COL1A1-207ENST00000486572 SCLT1Q96NL6 688 aa20.33■□□□□ 0.85
COL1A1-207ENST00000486572 ZBED2Q9BTP6 218 aa20.33■□□□□ 0.85
COL1A1-207ENST00000486572 FTHL17Q9BXU8 183 aa20.33■□□□□ 0.85
COL1A1-207ENST00000486572 ADAMTS10Q9H324 1103 aa20.33■□□□□ 0.85
COL1A1-207ENST00000486572 SEMA6BQ9H3T3 888 aa20.33■□□□□ 0.85
COL1A1-207ENST00000486572 DHX33Q9H6R0 707 aaKnown RBP20.33■□□□□ 0.85
COL1A1-207ENST00000486572 SLC28A3Q9HAS3 691 aa20.33■□□□□ 0.85
COL1A1-207ENST00000486572 ANKEF1Q9NU02 776 aa20.33■□□□□ 0.85
COL1A1-207ENST00000486572 MTMR10Q9NXD2 777 aa20.33■□□□□ 0.85
COL1A1-207ENST00000486572 LRWD1Q9UFC0 647 aa20.33■□□□□ 0.85
COL1A1-207ENST00000486572 LOXHD1Q8IVV2 1947 aa20.32■□□□□ 0.84
COL1A1-207ENST00000486572 TLL1O43897 1013 aa20.32■□□□□ 0.84
COL1A1-207ENST00000486572 MED24O75448 989 aa20.32■□□□□ 0.84
COL1A1-207ENST00000486572 HSP90AA1P07900 732 aaKnown RBP20.32■□□□□ 0.84
COL1A1-207ENST00000486572 RPA1P27694 616 aa20.32■□□□□ 0.84
COL1A1-207ENST00000486572 CDC42EP1Q00587 391 aa20.32■□□□□ 0.84
COL1A1-207ENST00000486572 PDIA5Q14554 519 aa20.32■□□□□ 0.84
COL1A1-207ENST00000486572 EMC2Q15006 297 aa20.32■□□□□ 0.84
COL1A1-207ENST00000486572 ODR4Q5SWX8 454 aa20.32■□□□□ 0.84
COL1A1-207ENST00000486572 DTHD1Q6ZMT9 781 aa20.32■□□□□ 0.84
COL1A1-207ENST00000486572 FAM43BQ6ZT52 329 aaPredicted RBP20.32■□□□□ 0.84
COL1A1-207ENST00000486572 IGSF22Q8N9C0 903 aa20.32■□□□□ 0.84
COL1A1-207ENST00000486572 ZNF576Q9H609 170 aa20.32■□□□□ 0.84
COL1A1-207ENST00000486572 ERVK-5Q9HDB9 667 aa20.32■□□□□ 0.84
COL1A1-207ENST00000486572 NOC2LQ9Y3T9 749 aaKnown RBP20.32■□□□□ 0.84
COL1A1-207ENST00000486572 GPR182O15218 404 aa20.31■□□□□ 0.84
COL1A1-207ENST00000486572 GAS2O43903 313 aaKnown RBP20.31■□□□□ 0.84
COL1A1-207ENST00000486572 CA3P07451 260 aa20.31■□□□□ 0.84
COL1A1-207ENST00000486572 XRCC6P12956 609 aaKnown RBP eCLIP20.31■□□□□ 0.84
COL1A1-207ENST00000486572 RARRES1P49788 294 aa20.31■□□□□ 0.84
COL1A1-207ENST00000486572 NFX1Q12986 1120 aaKnown RBP20.31■□□□□ 0.84
COL1A1-207ENST00000486572 PPP2R2DQ66LE6 453 aa20.31■□□□□ 0.84
COL1A1-207ENST00000486572 POTEGQ6S5H5 508 aa20.31■□□□□ 0.84
COL1A1-207ENST00000486572 PIGOQ8TEQ8 1089 aa20.31■□□□□ 0.84
COL1A1-207ENST00000486572 NLRP7Q8WX94 980 aa20.31■□□□□ 0.84
COL1A1-207ENST00000486572 BMP2KQ9NSY1 1161 aaPredicted RBP20.31■□□□□ 0.84
COL1A1-207ENST00000486572 SUCLA2Q9P2R7 463 aaPredicted RBP20.31■□□□□ 0.84
COL1A1-207ENST00000486572 STK24Q9Y6E0 443 aa20.31■□□□□ 0.84
COL1A1-207ENST00000486572 MUTP22033 750 aa20.3■□□□□ 0.84
COL1A1-207ENST00000486572 EIF4BP23588 611 aaKnown RBP20.3■□□□□ 0.84
COL1A1-207ENST00000486572 RESTQ13127 1097 aa20.3■□□□□ 0.84
COL1A1-207ENST00000486572 IL17AQ16552 155 aa20.3■□□□□ 0.84
COL1A1-207ENST00000486572 FAM117BQ6P1L5 589 aa20.3■□□□□ 0.84
COL1A1-207ENST00000486572 FAM228AQ86W67 206 aa20.3■□□□□ 0.84
COL1A1-207ENST00000486572 RHPN2Q8IUC4 686 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms