RNA–Protein interactions for RNA: ENST00000486536.6

USP41-204, Transcript of ubiquitin specific peptidase 41, humanhuman

TSL 2

Gene USP41, Length 1,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-204ENST00000486536 SLC35F1Q5T1Q4 408 aa7.06□□□□□ -1.28
USP41-204ENST00000486536 CDCA2Q69YH5 1023 aaPredicted RBP7.06□□□□□ -1.28
USP41-204ENST00000486536 CDPF1Q6NVV7 123 aa7.06□□□□□ -1.28
USP41-204ENST00000486536 CWC27Q6UX04 472 aaKnown RBP7.06□□□□□ -1.28
USP41-204ENST00000486536 USP53Q70EK8 1073 aa7.06□□□□□ -1.28
USP41-204ENST00000486536 MAMDC2Q7Z304 686 aaPredicted RBP7.06□□□□□ -1.28
USP41-204ENST00000486536 SPATA5Q8NB90 893 aa7.06□□□□□ -1.28
USP41-204ENST00000486536 EDC3Q96F86 508 aaKnown RBP7.06□□□□□ -1.28
USP41-204ENST00000486536 FAM84BQ96KN1 310 aaPredicted RBP7.06□□□□□ -1.28
USP41-204ENST00000486536 ZDHHC15Q96MV8 337 aa7.06□□□□□ -1.28
USP41-204ENST00000486536 ASPSCR1Q9BZE9 553 aa7.06□□□□□ -1.28
USP41-204ENST00000486536 PRR13Q9NZ81 148 aa7.06□□□□□ -1.28
USP41-204ENST00000486536 GPR55Q9Y2T6 319 aaPredicted RBP7.06□□□□□ -1.28
USP41-204ENST00000486536 TRAF6Q9Y4K3 522 aa7.06□□□□□ -1.28
USP41-204ENST00000486536 PCDHA9Q9Y5H5 950 aa7.06□□□□□ -1.28
USP41-204ENST00000486536 C10orf71Q711Q0 1435 aa7.06□□□□□ -1.28
USP41-204ENST00000486536 TNRC6CQ9HCJ0 1690 aaKnown RBP7.06□□□□□ -1.28
USP41-204ENST00000486536 IRS2Q9Y4H2 1338 aa7.05□□□□□ -1.28
USP41-204ENST00000486536 SNAP23O00161 211 aa7.05□□□□□ -1.28
USP41-204ENST00000486536 GPR39O43194 453 aa7.05□□□□□ -1.28
USP41-204ENST00000486536 PRC1O43663 620 aa7.05□□□□□ -1.28
USP41-204ENST00000486536 CRTAMO95727 393 aa7.05□□□□□ -1.28
USP41-204ENST00000486536 ITIH2P19823 946 aa7.05□□□□□ -1.28
USP41-204ENST00000486536 CYP7A1P22680 504 aa7.05□□□□□ -1.28
USP41-204ENST00000486536 GYG1P46976 350 aa7.05□□□□□ -1.28
USP41-204ENST00000486536 GPSM2P81274 684 aa7.05□□□□□ -1.28
USP41-204ENST00000486536 AMPD2Q01433 879 aa7.05□□□□□ -1.28
USP41-204ENST00000486536 ITKQ08881 620 aa7.05□□□□□ -1.28
USP41-204ENST00000486536 MAP3K12Q12852 859 aa7.05□□□□□ -1.28
USP41-204ENST00000486536 UBE3CQ15386 1083 aa7.05□□□□□ -1.28
USP41-204ENST00000486536 PRSS53Q2L4Q9 553 aa7.05□□□□□ -1.28
USP41-204ENST00000486536 MCMDC2Q4G0Z9 681 aa7.05□□□□□ -1.28
USP41-204ENST00000486536 ZMYM1Q5SVZ6 1142 aa7.05□□□□□ -1.28
USP41-204ENST00000486536 ZNF804AQ7Z570 1209 aa7.05□□□□□ -1.28
USP41-204ENST00000486536 WDR75Q8IWA0 830 aaKnown RBP7.05□□□□□ -1.28
USP41-204ENST00000486536 DCAF4Q8WV16 495 aa7.05□□□□□ -1.28
USP41-204ENST00000486536 ZNF622Q969S3 477 aaKnown RBP eCLIP7.05□□□□□ -1.28
USP41-204ENST00000486536 IL17RAQ96F46 866 aa7.05□□□□□ -1.28
USP41-204ENST00000486536 C1orf159Q96HA4 380 aa7.05□□□□□ -1.28
USP41-204ENST00000486536 DSCC1Q9BVC3 393 aa7.05□□□□□ -1.28
USP41-204ENST00000486536 LSG1Q9H089 658 aaKnown RBP7.05□□□□□ -1.28
USP41-204ENST00000486536 SEMA6CQ9H3T2 930 aa7.05□□□□□ -1.28
USP41-204ENST00000486536 ENAMQ9NRM1 1142 aa7.05□□□□□ -1.28
USP41-204ENST00000486536 MED23Q9ULK4 1368 aa7.05□□□□□ -1.28
USP41-204ENST00000486536 COL4A1P02462 1669 aa7.04□□□□□ -1.28
USP41-204ENST00000486536 MYH3P11055 1940 aa7.04□□□□□ -1.28
USP41-204ENST00000486536 A0A0D9SFI3 127 aa7.04□□□□□ -1.28
USP41-204ENST00000486536 B4E1Z4 1266 aa7.04□□□□□ -1.28
USP41-204ENST00000486536 RBAK-RBAKDNI3L0D1 243 aa7.04□□□□□ -1.28
USP41-204ENST00000486536 TSPAN6O43657 245 aa7.04□□□□□ -1.28
USP41-204ENST00000486536 GAS2O43903 313 aaKnown RBP7.04□□□□□ -1.28
USP41-204ENST00000486536 UFL1O94874 794 aa7.04□□□□□ -1.28
USP41-204ENST00000486536 APPP05067 770 aa7.04□□□□□ -1.28
USP41-204ENST00000486536 HSPA4P34932 840 aa7.04□□□□□ -1.28
USP41-204ENST00000486536 ADD2P35612 726 aa7.04□□□□□ -1.28
USP41-204ENST00000486536 TBX4P57082 545 aa7.04□□□□□ -1.28
USP41-204ENST00000486536 TGFB2P61812 414 aa7.04□□□□□ -1.28
USP41-204ENST00000486536 SNRPNP63162 240 aaKnown RBP7.04□□□□□ -1.28
USP41-204ENST00000486536 MCL1Q07820 350 aa7.04□□□□□ -1.28
USP41-204ENST00000486536 CYP4F3Q08477 520 aa7.04□□□□□ -1.28
USP41-204ENST00000486536 MTMR1Q13613 665 aa7.04□□□□□ -1.28
USP41-204ENST00000486536 PPP2R5AQ15172 486 aa7.04□□□□□ -1.28
USP41-204ENST00000486536 DPY19L1Q2PZI1 675 aa7.04□□□□□ -1.28
USP41-204ENST00000486536 ZNF787Q6DD87 383 aa7.04□□□□□ -1.28
USP41-204ENST00000486536 DENND5AQ6IQ26 1287 aa7.04□□□□□ -1.28
USP41-204ENST00000486536 SHISA2Q6UWI4 295 aa7.04□□□□□ -1.28
USP41-204ENST00000486536 TMC3Q7Z5M5 1100 aa7.04□□□□□ -1.28
USP41-204ENST00000486536 ZGPATQ8N5A5 531 aaKnown RBP7.04□□□□□ -1.28
USP41-204ENST00000486536 TDRD7Q8NHU6 1098 aaKnown RBP7.04□□□□□ -1.28
USP41-204ENST00000486536 TBC1D16Q8TBP0 767 aa7.04□□□□□ -1.28
USP41-204ENST00000486536 FBLIM1Q8WUP2 373 aa7.04□□□□□ -1.28
USP41-204ENST00000486536 MAP4K1Q92918 833 aa7.04□□□□□ -1.28
USP41-204ENST00000486536 USP7Q93009 1102 aa7.04□□□□□ -1.28
USP41-204ENST00000486536 WNK4Q96J92 1243 aa7.04□□□□□ -1.28
USP41-204ENST00000486536 FAM227BQ96M60 508 aa7.04□□□□□ -1.28
USP41-204ENST00000486536 EYA3Q99504 573 aa7.04□□□□□ -1.28
USP41-204ENST00000486536 TTC1Q99614 292 aa7.04□□□□□ -1.28
USP41-204ENST00000486536 IL25Q9H293 177 aa7.04□□□□□ -1.28
USP41-204ENST00000486536 AKTIPQ9H8T0 292 aa7.04□□□□□ -1.28
USP41-204ENST00000486536 PIH1D3Q9NQM4 214 aaKnown RBP7.04□□□□□ -1.28
USP41-204ENST00000486536 SPEF2Q9C093 1822 aa7.04□□□□□ -1.28
USP41-204ENST00000486536 CCDC171Q6TFL3 1326 aa7.03□□□□□ -1.28
USP41-204ENST00000486536 SALL1Q9NSC2 1324 aa7.03□□□□□ -1.28
USP41-204ENST00000486536 AQP7O14520 342 aa7.03□□□□□ -1.28
USP41-204ENST00000486536 DYNC1LI2O43237 492 aaPredicted RBP7.03□□□□□ -1.28
USP41-204ENST00000486536 FRAT2O75474 233 aaPredicted RBP7.03□□□□□ -1.28
USP41-204ENST00000486536 IDH1O75874 414 aaKnown RBP7.03□□□□□ -1.28
USP41-204ENST00000486536 EOMESO95936 686 aa7.03□□□□□ -1.28
USP41-204ENST00000486536 IL1R1P14778 569 aa7.03□□□□□ -1.28
USP41-204ENST00000486536 SCNN1BP51168 640 aa7.03□□□□□ -1.28
USP41-204ENST00000486536 BECN1Q14457 450 aa7.03□□□□□ -1.28
USP41-204ENST00000486536 RABEP1Q15276 862 aa7.03□□□□□ -1.28
USP41-204ENST00000486536 SLC9C2Q5TAH2 1124 aa7.03□□□□□ -1.28
USP41-204ENST00000486536 PIK3R6Q5UE93 754 aa7.03□□□□□ -1.28
USP41-204ENST00000486536 SPTY2D1Q68D10 685 aaPredicted RBP7.03□□□□□ -1.28
USP41-204ENST00000486536 KCNT2Q6UVM3 1135 aa7.03□□□□□ -1.28
USP41-204ENST00000486536 DPP8Q6V1X1 898 aaPredicted RBP7.03□□□□□ -1.28
USP41-204ENST00000486536 CCAR1Q8IX12 1150 aaKnown RBP7.03□□□□□ -1.28
USP41-204ENST00000486536 KREMEN2Q8NCW0 462 aa7.03□□□□□ -1.28
USP41-204ENST00000486536 SUPT20HQ8NEM7 779 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms