RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 ABCD1P33897 745 aa14.68□□□□□ -0.06
VTI1BP1-201ENST00000486325 POLGP54098 1239 aaPredicted RBP14.68□□□□□ -0.06
VTI1BP1-201ENST00000486325 RTP1P59025 263 aa14.68□□□□□ -0.06
VTI1BP1-201ENST00000486325 NKX3-2P78367 333 aa14.68□□□□□ -0.06
VTI1BP1-201ENST00000486325 STK4Q13043 487 aa14.68□□□□□ -0.06
VTI1BP1-201ENST00000486325 MAP3K21Q5TCX8 1036 aa14.68□□□□□ -0.06
VTI1BP1-201ENST00000486325 PLA2G4FQ68DD2 849 aa14.68□□□□□ -0.06
VTI1BP1-201ENST00000486325 C11orf57Q6ZUT1 292 aaPredicted RBP14.68□□□□□ -0.06
VTI1BP1-201ENST00000486325 GUF1Q8N442 669 aaKnown RBP14.68□□□□□ -0.06
VTI1BP1-201ENST00000486325 ENOX1Q8TC92 643 aaKnown RBP14.68□□□□□ -0.06
VTI1BP1-201ENST00000486325 C16orf70Q9BSU1 422 aa14.68□□□□□ -0.06
VTI1BP1-201ENST00000486325 UPF3AQ9H1J1 476 aaKnown RBP14.68□□□□□ -0.06
VTI1BP1-201ENST00000486325 DHX33Q9H6R0 707 aaKnown RBP14.68□□□□□ -0.06
VTI1BP1-201ENST00000486325 GRPEL1Q9HAV7 217 aa14.68□□□□□ -0.06
VTI1BP1-201ENST00000486325 SLC39A2Q9NP94 309 aa14.68□□□□□ -0.06
VTI1BP1-201ENST00000486325 TRPC6Q9Y210 931 aa14.68□□□□□ -0.06
VTI1BP1-201ENST00000486325 BICDL2A1A5D9 508 aa14.67□□□□□ -0.06
VTI1BP1-201ENST00000486325 RRN3P2A6NIE6 340 aa14.67□□□□□ -0.06
VTI1BP1-201ENST00000486325 MAGEB2O15479 319 aa14.67□□□□□ -0.06
VTI1BP1-201ENST00000486325 ADCY6O43306 1168 aa14.67□□□□□ -0.06
VTI1BP1-201ENST00000486325 MAFO75444 373 aaPredicted RBP14.67□□□□□ -0.06
VTI1BP1-201ENST00000486325 PLS3P13797 630 aa14.67□□□□□ -0.06
VTI1BP1-201ENST00000486325 PRCPP42785 496 aa14.67□□□□□ -0.06
VTI1BP1-201ENST00000486325 SMTNP53814 917 aa14.67□□□□□ -0.06
VTI1BP1-201ENST00000486325 TBC1D8BQ0IIM8 1120 aa14.67□□□□□ -0.06
VTI1BP1-201ENST00000486325 ALCAMQ13740 583 aa14.67□□□□□ -0.06
VTI1BP1-201ENST00000486325 IQCB1Q15051 598 aa14.67□□□□□ -0.06
VTI1BP1-201ENST00000486325 FSCN1Q16658 493 aaKnown RBP14.67□□□□□ -0.06
VTI1BP1-201ENST00000486325 ODR4Q5SWX8 454 aa14.67□□□□□ -0.06
VTI1BP1-201ENST00000486325 FAM102BQ5T8I3 360 aa14.67□□□□□ -0.06
VTI1BP1-201ENST00000486325 MYOCDQ8IZQ8 938 aa14.67□□□□□ -0.06
VTI1BP1-201ENST00000486325 RNF214Q8ND24 703 aa14.67□□□□□ -0.06
VTI1BP1-201ENST00000486325 TCP11Q8WWU5 503 aa14.67□□□□□ -0.06
VTI1BP1-201ENST00000486325 IFT74Q96LB3 600 aa14.67□□□□□ -0.06
VTI1BP1-201ENST00000486325 KATNAL1Q9BW62 490 aa14.67□□□□□ -0.06
VTI1BP1-201ENST00000486325 MRPL44Q9H9J2 332 aaKnown RBP14.67□□□□□ -0.06
VTI1BP1-201ENST00000486325 RWDD2AQ9UIY3 292 aa14.67□□□□□ -0.06
VTI1BP1-201ENST00000486325 GDAQ9Y2T3 454 aa14.67□□□□□ -0.06
VTI1BP1-201ENST00000486325 PCDHB13Q9Y5F0 798 aa14.67□□□□□ -0.06
VTI1BP1-201ENST00000486325 COL1A2P08123 1366 aa14.67□□□□□ -0.06
VTI1BP1-201ENST00000486325 TMEM150BA6NC51 233 aa14.66□□□□□ -0.06
VTI1BP1-201ENST00000486325 SFI1A8K8P3 1242 aa14.66□□□□□ -0.06
VTI1BP1-201ENST00000486325 H0YCG3 227 aa14.66□□□□□ -0.06
VTI1BP1-201ENST00000486325 MARK3P27448 753 aa14.66□□□□□ -0.06
VTI1BP1-201ENST00000486325 DNM2P50570 870 aa14.66□□□□□ -0.06
VTI1BP1-201ENST00000486325 MYL5Q02045 173 aa14.66□□□□□ -0.06
VTI1BP1-201ENST00000486325 CACNB1Q02641 598 aaPredicted RBP14.66□□□□□ -0.06
VTI1BP1-201ENST00000486325 TRIM32Q13049 653 aa14.66□□□□□ -0.06
VTI1BP1-201ENST00000486325 PAK1Q13153 545 aa14.66□□□□□ -0.06
VTI1BP1-201ENST00000486325 EMC2Q15006 297 aa14.66□□□□□ -0.06
VTI1BP1-201ENST00000486325 PPP2R5AQ15172 486 aa14.66□□□□□ -0.06
VTI1BP1-201ENST00000486325 GNASQ5JWF2 1037 aa14.66□□□□□ -0.06
VTI1BP1-201ENST00000486325 IER5Q5VY09 327 aa14.66□□□□□ -0.06
VTI1BP1-201ENST00000486325 FOXR2Q6PJQ5 311 aa14.66□□□□□ -0.06
VTI1BP1-201ENST00000486325 SFR1Q86XK3 245 aa14.66□□□□□ -0.06
VTI1BP1-201ENST00000486325 TRIM50Q86XT4 487 aa14.66□□□□□ -0.06
VTI1BP1-201ENST00000486325 FAM178BQ8IXR5 827 aa14.66□□□□□ -0.06
VTI1BP1-201ENST00000486325 RETREG2Q8NC44 543 aa14.66□□□□□ -0.06
VTI1BP1-201ENST00000486325 CEP89Q96ST8 783 aa14.66□□□□□ -0.06
VTI1BP1-201ENST00000486325 SH2D3AQ9BRG2 576 aa14.66□□□□□ -0.06
VTI1BP1-201ENST00000486325 NTPCRQ9BSD7 190 aaKnown RBP14.66□□□□□ -0.06
VTI1BP1-201ENST00000486325 RNPEPQ9H4A4 650 aa14.66□□□□□ -0.06
VTI1BP1-201ENST00000486325 HMX1Q9NP08 348 aaPredicted RBP14.66□□□□□ -0.06
VTI1BP1-201ENST00000486325 TSKSQ9UJT2 592 aa14.66□□□□□ -0.06
VTI1BP1-201ENST00000486325 PTPN22Q9Y2R2 807 aa14.66□□□□□ -0.06
VTI1BP1-201ENST00000486325 PCDHA2Q9Y5H9 948 aa14.66□□□□□ -0.06
VTI1BP1-201ENST00000486325 RSPH10B2B2RC85 870 aa14.65□□□□□ -0.06
VTI1BP1-201ENST00000486325 EIF3DO15371 548 aaKnown RBP eCLIP14.65□□□□□ -0.06
VTI1BP1-201ENST00000486325 MYL3P08590 195 aa14.65□□□□□ -0.06
VTI1BP1-201ENST00000486325 C6orf222P0C671 652 aaPredicted RBP14.65□□□□□ -0.06
VTI1BP1-201ENST00000486325 RSPH10BP0C881 870 aa14.65□□□□□ -0.06
VTI1BP1-201ENST00000486325 INSRRP14616 1297 aa14.65□□□□□ -0.06
VTI1BP1-201ENST00000486325 CD44P16070 742 aaKnown RBP14.65□□□□□ -0.06
VTI1BP1-201ENST00000486325 CCNE1P24864 410 aa14.65□□□□□ -0.06
VTI1BP1-201ENST00000486325 MAPK7Q13164 816 aa14.65□□□□□ -0.06
VTI1BP1-201ENST00000486325 SPATA1Q5VX52 437 aa14.65□□□□□ -0.06
VTI1BP1-201ENST00000486325 KLHL10Q6JEL2 608 aa14.65□□□□□ -0.06
VTI1BP1-201ENST00000486325 MAEAQ7L5Y9 396 aa14.65□□□□□ -0.06
VTI1BP1-201ENST00000486325 ZNF720Q7Z2F6 126 aa14.65□□□□□ -0.06
VTI1BP1-201ENST00000486325 SMYD4Q8IYR2 804 aaPredicted RBP14.65□□□□□ -0.06
VTI1BP1-201ENST00000486325 DAW1Q8N136 415 aa14.65□□□□□ -0.06
VTI1BP1-201ENST00000486325 PCSK9Q8NBP7 692 aaKnown RBP14.65□□□□□ -0.06
VTI1BP1-201ENST00000486325 KIAA0895Q8NCT3 520 aa14.65□□□□□ -0.06
VTI1BP1-201ENST00000486325 ZNF507Q8TCN5 953 aa14.65□□□□□ -0.06
VTI1BP1-201ENST00000486325 SPIRE2Q8WWL2 714 aa14.65□□□□□ -0.06
VTI1BP1-201ENST00000486325 NELFBQ8WX92 580 aa14.65□□□□□ -0.06
VTI1BP1-201ENST00000486325 ANP32BQ92688 251 aaKnown RBP14.65□□□□□ -0.06
VTI1BP1-201ENST00000486325 ST6GALNAC4Q9H4F1 302 aa14.65□□□□□ -0.06
VTI1BP1-201ENST00000486325 XPNPEP3Q9NQH7 507 aa14.65□□□□□ -0.06
VTI1BP1-201ENST00000486325 DDX20Q9UHI6 824 aaKnown RBP14.65□□□□□ -0.06
VTI1BP1-201ENST00000486325 ZSWIM8A7E2V4 1837 aa14.64□□□□□ -0.07
VTI1BP1-201ENST00000486325 IGKV6-21A0A0C4DH24 114 aa14.64□□□□□ -0.07
VTI1BP1-201ENST00000486325 ASAP2O43150 1006 aa14.64□□□□□ -0.07
VTI1BP1-201ENST00000486325 FGFR1OPO95684 399 aaKnown RBP14.64□□□□□ -0.07
VTI1BP1-201ENST00000486325 F2P00734 622 aa14.64□□□□□ -0.07
VTI1BP1-201ENST00000486325 INHAP05111 366 aa14.64□□□□□ -0.07
VTI1BP1-201ENST00000486325 ZNF286BP0CG31 522 aa14.64□□□□□ -0.07
VTI1BP1-201ENST00000486325 PTGS1P23219 599 aa14.64□□□□□ -0.07
VTI1BP1-201ENST00000486325 TMOD1P28289 359 aa14.64□□□□□ -0.07
VTI1BP1-201ENST00000486325 CCND3P30281 292 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms