RNA–Protein interactions for RNA: ENST00000485780.1

SHROOM3-207, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-207ENST00000485780 TPH2Q8IWU9 490 aa10.41□□□□□ -0.74
SHROOM3-207ENST00000485780 CCDC155Q8N6L0 562 aa10.41□□□□□ -0.74
SHROOM3-207ENST00000485780 RETREG2Q8NC44 543 aa10.41□□□□□ -0.74
SHROOM3-207ENST00000485780 DHX38Q92620 1227 aaKnown RBP10.41□□□□□ -0.74
SHROOM3-207ENST00000485780 SYMPKQ92797 1274 aaKnown RBP10.41□□□□□ -0.74
SHROOM3-207ENST00000485780 SCLYQ96I15 445 aa10.41□□□□□ -0.74
SHROOM3-207ENST00000485780 SPATA32Q96LK8 384 aa10.41□□□□□ -0.74
SHROOM3-207ENST00000485780 CLIC6Q96NY7 704 aa10.41□□□□□ -0.74
SHROOM3-207ENST00000485780 PNMA5Q96PV4 448 aa10.41□□□□□ -0.74
SHROOM3-207ENST00000485780 NACC1Q96RE7 527 aa10.41□□□□□ -0.74
SHROOM3-207ENST00000485780 DHX33Q9H6R0 707 aaKnown RBP10.41□□□□□ -0.74
SHROOM3-207ENST00000485780 CYP26B1Q9NR63 512 aa10.41□□□□□ -0.74
SHROOM3-207ENST00000485780 NRBP2Q9NSY0 501 aa10.41□□□□□ -0.74
SHROOM3-207ENST00000485780 SETD4Q9NVD3 440 aa10.41□□□□□ -0.74
SHROOM3-207ENST00000485780 TUBE1Q9UJT0 475 aa10.41□□□□□ -0.74
SHROOM3-207ENST00000485780 STXBP5LQ9Y2K9 1186 aa10.41□□□□□ -0.74
SHROOM3-207ENST00000485780 PCDHA2Q9Y5H9 948 aa10.41□□□□□ -0.74
SHROOM3-207ENST00000485780 SCN5AQ14524 2016 aa10.4□□□□□ -0.74
SHROOM3-207ENST00000485780 TMEM150BA6NC51 233 aa10.4□□□□□ -0.74
SHROOM3-207ENST00000485780 ZBBXA8MT70 800 aa10.4□□□□□ -0.74
SHROOM3-207ENST00000485780 PITPNM1O00562 1244 aa10.4□□□□□ -0.74
SHROOM3-207ENST00000485780 ZBTB39O15060 712 aa10.4□□□□□ -0.74
SHROOM3-207ENST00000485780 TREHO43280 583 aa10.4□□□□□ -0.74
SHROOM3-207ENST00000485780 CAND2O75155 1236 aa10.4□□□□□ -0.74
SHROOM3-207ENST00000485780 RPLP2P05387 115 aaKnown RBP10.4□□□□□ -0.74
SHROOM3-207ENST00000485780 UBA7P41226 1012 aa10.4□□□□□ -0.74
SHROOM3-207ENST00000485780 ZNF200P98182 395 aaPredicted RBP10.4□□□□□ -0.74
SHROOM3-207ENST00000485780 RESP18Q5W5W9 173 aa10.4□□□□□ -0.74
SHROOM3-207ENST00000485780 PLA2G4FQ68DD2 849 aa10.4□□□□□ -0.74
SHROOM3-207ENST00000485780 ADALQ6DHV7 355 aa10.4□□□□□ -0.74
SHROOM3-207ENST00000485780 TAF2Q6P1X5 1199 aa10.4□□□□□ -0.74
SHROOM3-207ENST00000485780 MTHFD1LQ6UB35 978 aa10.4□□□□□ -0.74
SHROOM3-207ENST00000485780 OTUD6AQ7L8S5 288 aa10.4□□□□□ -0.74
SHROOM3-207ENST00000485780 KCNK18Q7Z418 384 aa10.4□□□□□ -0.74
SHROOM3-207ENST00000485780 CABP7Q86V35 215 aa10.4□□□□□ -0.74
SHROOM3-207ENST00000485780 CKAP2LQ8IYA6 745 aa10.4□□□□□ -0.74
SHROOM3-207ENST00000485780 TMEM87AQ8NBN3 555 aa10.4□□□□□ -0.74
SHROOM3-207ENST00000485780 CAGE1Q8TC20 777 aa10.4□□□□□ -0.74
SHROOM3-207ENST00000485780 LRRC15Q8TF66 581 aa10.4□□□□□ -0.74
SHROOM3-207ENST00000485780 TRAPPC12Q8WVT3 735 aa10.4□□□□□ -0.74
SHROOM3-207ENST00000485780 EPSTI1Q96J88 318 aa10.4□□□□□ -0.74
SHROOM3-207ENST00000485780 WNT8AQ9H1J5 351 aa10.4□□□□□ -0.74
SHROOM3-207ENST00000485780 BLOC1S4Q9NUP1 217 aa10.4□□□□□ -0.74
SHROOM3-207ENST00000485780 SEPT9Q9UHD8 586 aaPredicted RBP10.4□□□□□ -0.74
SHROOM3-207ENST00000485780 TMEM265A0A087WTH1 108 aa10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 A0A087X0B3 334 aa10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 SMIM35A0A1B0GVV1 85 aa10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 A0A1W2PQ27 194 aa10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 A0A1W2PQ64 194 aa10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 A0A1W2PQD8 194 aa10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 DDX11L8A8MPP1 907 aa10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 MAGEB2O15479 319 aa10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 GAS2O43903 313 aaKnown RBP10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 MAFO75444 373 aaPredicted RBP10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 EYA4O95677 639 aa10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 PFKMP08237 780 aa10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 ACTN1P12814 892 aa10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 NCLP19338 710 aaKnown RBP10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 DNAJB2P25686 324 aa10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 RFC5P40937 340 aa10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 ME1P48163 572 aa10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 NPEPPSP55786 919 aa10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 KARSQ15046 597 aaKnown RBP10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 NAALADL2Q58DX5 795 aa10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 SPECC1Q5M775 1068 aa10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 TRAF7Q6Q0C0 670 aa10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 RUFY4Q6ZNE9 571 aa10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 C16orf59Q7L2K0 433 aa10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 OTOP2Q7RTS6 562 aa10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 DEFB128Q7Z7B8 93 aa10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 EXOC8Q8IYI6 725 aa10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 PIGOQ8TEQ8 1089 aa10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 HERVK_113Q902F9 699 aa10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 WNT8BQ93098 351 aa10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 CALML4Q96GE6 196 aa10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 CEP170P1Q96L14 293 aa10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 SEMA6BQ9H3T3 888 aa10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 XPNPEP1Q9NQW7 623 aa10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 DDX19AQ9NUU7 478 aaKnown RBP10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 STK17AQ9UEE5 414 aa10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 KIAA1024Q9UPX6 916 aa10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 HPSEQ9Y251 543 aa10.39□□□□□ -0.75
SHROOM3-207ENST00000485780 DGAT1O75907 488 aa10.38□□□□□ -0.75
SHROOM3-207ENST00000485780 PLCG1P19174 1290 aa10.38□□□□□ -0.75
SHROOM3-207ENST00000485780 CMA1P23946 247 aa10.38□□□□□ -0.75
SHROOM3-207ENST00000485780 KLRC1P26715 233 aa10.38□□□□□ -0.75
SHROOM3-207ENST00000485780 RFC2P35250 354 aa10.38□□□□□ -0.75
SHROOM3-207ENST00000485780 TXLNAP40222 546 aa10.38□□□□□ -0.75
SHROOM3-207ENST00000485780 TBC1D8BQ0IIM8 1120 aa10.38□□□□□ -0.75
SHROOM3-207ENST00000485780 MKRN4PQ13434 485 aaPredicted RBP10.38□□□□□ -0.75
SHROOM3-207ENST00000485780 E2F4Q16254 413 aa10.38□□□□□ -0.75
SHROOM3-207ENST00000485780 MTERF2Q49AM1 385 aa10.38□□□□□ -0.75
SHROOM3-207ENST00000485780 FAM26DQ5JW98 314 aa10.38□□□□□ -0.75
SHROOM3-207ENST00000485780 SLC17A8Q8NDX2 589 aa10.38□□□□□ -0.75
SHROOM3-207ENST00000485780 TET1Q8NFU7 2136 aa10.38□□□□□ -0.75
SHROOM3-207ENST00000485780 TIFAQ96CG3 184 aa10.38□□□□□ -0.75
SHROOM3-207ENST00000485780 GUCD1Q96NT3 240 aa10.38□□□□□ -0.75
SHROOM3-207ENST00000485780 JPH2Q9BR39 696 aaPredicted RBP10.38□□□□□ -0.75
SHROOM3-207ENST00000485780 BHMT2Q9H2M3 363 aa10.38□□□□□ -0.75
SHROOM3-207ENST00000485780 GDPD2Q9HCC8 539 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms