RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 TRIM43Q96BQ3 446 aaPredicted RBP22.19■■□□□ 1.14
COL6A2-208ENST00000485591 GAS2O43903 313 aaKnown RBP22.18■■□□□ 1.14
COL6A2-208ENST00000485591 EMC2Q15006 297 aa22.18■■□□□ 1.14
COL6A2-208ENST00000485591 CSPP1Q1MSJ5 1256 aa22.18■■□□□ 1.14
COL6A2-208ENST00000485591 EFCAB12Q6NXP0 572 aa22.18■■□□□ 1.14
COL6A2-208ENST00000485591 RSPH3Q86UC2 560 aa22.18■■□□□ 1.14
COL6A2-208ENST00000485591 METTL13Q8N6R0 699 aa22.18■■□□□ 1.14
COL6A2-208ENST00000485591 LRRC15Q8TF66 581 aa22.18■■□□□ 1.14
COL6A2-208ENST00000485591 DNAJB3Q8WWF6 145 aa22.18■■□□□ 1.14
COL6A2-208ENST00000485591 FAM49AQ9H0Q0 323 aaPredicted RBP22.18■■□□□ 1.14
COL6A2-208ENST00000485591 BLOC1S4Q9NUP1 217 aa22.18■■□□□ 1.14
COL6A2-208ENST00000485591 FAM13BQ9NYF5 915 aa22.18■■□□□ 1.14
COL6A2-208ENST00000485591 STK17AQ9UEE5 414 aa22.18■■□□□ 1.14
COL6A2-208ENST00000485591 A0A087X0B3 334 aa22.17■■□□□ 1.14
COL6A2-208ENST00000485591 A0A1W2PQ27 194 aa22.17■■□□□ 1.14
COL6A2-208ENST00000485591 A0A1W2PQ64 194 aa22.17■■□□□ 1.14
COL6A2-208ENST00000485591 A0A1W2PQD8 194 aa22.17■■□□□ 1.14
COL6A2-208ENST00000485591 TIMP1P01033 207 aa22.17■■□□□ 1.14
COL6A2-208ENST00000485591 CKBP12277 381 aa22.17■■□□□ 1.14
COL6A2-208ENST00000485591 RAG1P15918 1043 aa22.17■■□□□ 1.14
COL6A2-208ENST00000485591 CMA1P23946 247 aa22.17■■□□□ 1.14
COL6A2-208ENST00000485591 TMOD1P28289 359 aa22.17■■□□□ 1.14
COL6A2-208ENST00000485591 THPOP40225 353 aa22.17■■□□□ 1.14
COL6A2-208ENST00000485591 CLCN3P51790 818 aa22.17■■□□□ 1.14
COL6A2-208ENST00000485591 RRAGBQ5VZM2 374 aa22.17■■□□□ 1.14
COL6A2-208ENST00000485591 PADI6Q6TGC4 694 aa22.17■■□□□ 1.14
COL6A2-208ENST00000485591 CCDC73Q6ZRK6 1079 aa22.17■■□□□ 1.14
COL6A2-208ENST00000485591 KIAA0319LQ8IZA0 1049 aa22.17■■□□□ 1.14
COL6A2-208ENST00000485591 NME8Q8N427 588 aa22.17■■□□□ 1.14
COL6A2-208ENST00000485591 LRRC71Q8N4P6 559 aa22.17■■□□□ 1.14
COL6A2-208ENST00000485591 RAD54LQ92698 747 aa22.17■■□□□ 1.14
COL6A2-208ENST00000485591 MTRQ99707 1265 aa22.17■■□□□ 1.14
COL6A2-208ENST00000485591 PPP1R12CQ9BZL4 782 aa22.17■■□□□ 1.14
COL6A2-208ENST00000485591 SUGCTQ9HAC7 445 aa22.17■■□□□ 1.14
COL6A2-208ENST00000485591 ATP6V0A4Q9HBG4 840 aa22.17■■□□□ 1.14
COL6A2-208ENST00000485591 XPNPEP1Q9NQW7 623 aa22.17■■□□□ 1.14
COL6A2-208ENST00000485591 SCN5AQ14524 2016 aa22.16■■□□□ 1.14
COL6A2-208ENST00000485591 UMODL1Q5DID0 1318 aa22.16■■□□□ 1.14
COL6A2-208ENST00000485591 USO1O60763 962 aaKnown RBP22.16■■□□□ 1.14
COL6A2-208ENST00000485591 MKRN4PQ13434 485 aaPredicted RBP22.16■■□□□ 1.14
COL6A2-208ENST00000485591 NAALADL2Q58DX5 795 aa22.16■■□□□ 1.14
COL6A2-208ENST00000485591 CLEC17AQ6ZS10 378 aa22.16■■□□□ 1.14
COL6A2-208ENST00000485591 SYT2Q8N9I0 419 aaPredicted RBP22.16■■□□□ 1.14
COL6A2-208ENST00000485591 TMEM87AQ8NBN3 555 aa22.16■■□□□ 1.14
COL6A2-208ENST00000485591 LARP4BQ92615 738 aaKnown RBP22.16■■□□□ 1.14
COL6A2-208ENST00000485591 MAP7D2Q96T17 732 aa22.16■■□□□ 1.14
COL6A2-208ENST00000485591 BMP2KQ9NSY1 1161 aaPredicted RBP22.16■■□□□ 1.14
COL6A2-208ENST00000485591 ZMYND8Q9ULU4 1186 aaPredicted RBP22.16■■□□□ 1.14
COL6A2-208ENST00000485591 PLA2G4BP0C869 781 aa22.15■■□□□ 1.14
COL6A2-208ENST00000485591 SELPP16109 830 aa22.15■■□□□ 1.14
COL6A2-208ENST00000485591 SYN1P17600 705 aa22.15■■□□□ 1.14
COL6A2-208ENST00000485591 ITGB8P26012 769 aa22.15■■□□□ 1.14
COL6A2-208ENST00000485591 CYP2C18P33260 490 aa22.15■■□□□ 1.14
COL6A2-208ENST00000485591 STAT6P42226 847 aa22.15■■□□□ 1.14
COL6A2-208ENST00000485591 DNM2P50570 870 aa22.15■■□□□ 1.14
COL6A2-208ENST00000485591 SLC12A3P55017 1021 aa22.15■■□□□ 1.14
COL6A2-208ENST00000485591 DRP2Q13474 957 aa22.15■■□□□ 1.14
COL6A2-208ENST00000485591 FAM26DQ5JW98 314 aa22.15■■□□□ 1.14
COL6A2-208ENST00000485591 ZNF618Q5T7W0 954 aa22.15■■□□□ 1.14
COL6A2-208ENST00000485591 LRRC8DQ7L1W4 858 aa22.15■■□□□ 1.14
COL6A2-208ENST00000485591 PDILTQ8N807 584 aa22.15■■□□□ 1.14
COL6A2-208ENST00000485591 MCPH1Q8NEM0 835 aa22.15■■□□□ 1.14
COL6A2-208ENST00000485591 TCP11Q8WWU5 503 aa22.15■■□□□ 1.14
COL6A2-208ENST00000485591 WNT8AQ9H1J5 351 aa22.15■■□□□ 1.14
COL6A2-208ENST00000485591 MYH11P35749 1972 aa22.15■■□□□ 1.14
COL6A2-208ENST00000485591 FAM237AA0A1B0GTK4 181 aa22.14■■□□□ 1.13
COL6A2-208ENST00000485591 CYP11B2P19099 503 aa22.14■■□□□ 1.13
COL6A2-208ENST00000485591 MRPS6P82932 125 aaKnown RBP22.14■■□□□ 1.13
COL6A2-208ENST00000485591 E2F4Q16254 413 aa22.14■■□□□ 1.13
COL6A2-208ENST00000485591 TRAF7Q6Q0C0 670 aa22.14■■□□□ 1.13
COL6A2-208ENST00000485591 PYM1Q9BRP8 204 aaKnown RBP22.14■■□□□ 1.13
COL6A2-208ENST00000485591 CUEDC2Q9H467 287 aa22.14■■□□□ 1.13
COL6A2-208ENST00000485591 KCND2Q9NZV8 630 aa22.14■■□□□ 1.13
COL6A2-208ENST00000485591 KCNH3Q9ULD8 1083 aa22.14■■□□□ 1.13
COL6A2-208ENST00000485591 HPSEQ9Y251 543 aa22.14■■□□□ 1.13
COL6A2-208ENST00000485591 SSBP05455 408 aaKnown RBP eCLIP22.13■■□□□ 1.13
COL6A2-208ENST00000485591 CTSHP09668 335 aa22.13■■□□□ 1.13
COL6A2-208ENST00000485591 IQCF3P0C7M6 154 aa22.13■■□□□ 1.13
COL6A2-208ENST00000485591 PFKFB1P16118 471 aa22.13■■□□□ 1.13
COL6A2-208ENST00000485591 MGAT3Q09327 533 aa22.13■■□□□ 1.13
COL6A2-208ENST00000485591 MCM6Q14566 821 aa22.13■■□□□ 1.13
COL6A2-208ENST00000485591 IER5Q5VY09 327 aa22.13■■□□□ 1.13
COL6A2-208ENST00000485591 MFSD5Q6N075 450 aa22.13■■□□□ 1.13
COL6A2-208ENST00000485591 RINT1Q6NUQ1 792 aa22.13■■□□□ 1.13
COL6A2-208ENST00000485591 ZNF710Q8N1W2 664 aa22.13■■□□□ 1.13
COL6A2-208ENST00000485591 MRPS27Q92552 414 aaKnown RBP22.13■■□□□ 1.13
COL6A2-208ENST00000485591 RUSC1Q9BVN2 902 aa22.13■■□□□ 1.13
COL6A2-208ENST00000485591 PANK2Q9BZ23 570 aa22.13■■□□□ 1.13
COL6A2-208ENST00000485591 SUCLA2Q9P2R7 463 aaPredicted RBP22.13■■□□□ 1.13
COL6A2-208ENST00000485591 AKT3Q9Y243 479 aa22.13■■□□□ 1.13
COL6A2-208ENST00000485591 A0A1B0GVL5 298 aa22.12■■□□□ 1.13
COL6A2-208ENST00000485591 GOLGA6L4A6NEF3 574 aa22.12■■□□□ 1.13
COL6A2-208ENST00000485591 RSPH10B2B2RC85 870 aa22.12■■□□□ 1.13
COL6A2-208ENST00000485591 M0QZ92 97 aa22.12■■□□□ 1.13
COL6A2-208ENST00000485591 PARNO95453 639 aaKnown RBP22.12■■□□□ 1.13
COL6A2-208ENST00000485591 VTNP04004 478 aa22.12■■□□□ 1.13
COL6A2-208ENST00000485591 RSPH10BP0C881 870 aa22.12■■□□□ 1.13
COL6A2-208ENST00000485591 C1orf186Q6ZWK4 172 aa22.12■■□□□ 1.13
COL6A2-208ENST00000485591 FSIP1Q8NA03 581 aa22.12■■□□□ 1.13
COL6A2-208ENST00000485591 IQUBQ8NA54 791 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms