RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 RSPH3Q86UC2 560 aa12□□□□□ -0.49
DDX56-212ENST00000485367 LEO1Q8WVC0 666 aaPredicted RBP12□□□□□ -0.49
DDX56-212ENST00000485367 ZBTB10Q96DT7 871 aa12□□□□□ -0.49
DDX56-212ENST00000485367 ZNF577Q9BSK1 485 aa12□□□□□ -0.49
DDX56-212ENST00000485367 SH3GLB2Q9NR46 395 aa12□□□□□ -0.49
DDX56-212ENST00000485367 MICAL3Q7RTP6 2002 aa12□□□□□ -0.49
DDX56-212ENST00000485367 CHD7Q9P2D1 2997 aa12□□□□□ -0.49
DDX56-212ENST00000485367 RRN3P2A6NIE6 340 aa12□□□□□ -0.49
DDX56-212ENST00000485367 DLL1O00548 723 aa12□□□□□ -0.49
DDX56-212ENST00000485367 ARHGEF15O94989 841 aa12□□□□□ -0.49
DDX56-212ENST00000485367 DEXIO95424 95 aa12□□□□□ -0.49
DDX56-212ENST00000485367 AMHP03971 560 aa12□□□□□ -0.49
DDX56-212ENST00000485367 TAP1Q03518 808 aa12□□□□□ -0.49
DDX56-212ENST00000485367 PLCB4Q15147 1175 aa12□□□□□ -0.49
DDX56-212ENST00000485367 CCDC85BQ15834 202 aaPredicted RBP12□□□□□ -0.49
DDX56-212ENST00000485367 FAM26DQ5JW98 314 aa12□□□□□ -0.49
DDX56-212ENST00000485367 USP38Q8NB14 1042 aa12□□□□□ -0.49
DDX56-212ENST00000485367 DNAJB3Q8WWF6 145 aa12□□□□□ -0.49
DDX56-212ENST00000485367 ARNTL2Q8WYA1 636 aa12□□□□□ -0.49
DDX56-212ENST00000485367 TIGD1Q96MW7 591 aa12□□□□□ -0.49
DDX56-212ENST00000485367 FAM49AQ9H0Q0 323 aaPredicted RBP12□□□□□ -0.49
DDX56-212ENST00000485367 CUL9Q8IWT3 2517 aa11.99□□□□□ -0.49
DDX56-212ENST00000485367 LCHNA4D1U4 455 aa11.99□□□□□ -0.49
DDX56-212ENST00000485367 MBLAC1A4D2B0 266 aaPredicted RBP11.99□□□□□ -0.49
DDX56-212ENST00000485367 RFXAPO00287 272 aa11.99□□□□□ -0.49
DDX56-212ENST00000485367 TULP2O00295 520 aa11.99□□□□□ -0.49
DDX56-212ENST00000485367 DHX15O43143 795 aaKnown RBP11.99□□□□□ -0.49
DDX56-212ENST00000485367 ATG7O95352 703 aa11.99□□□□□ -0.49
DDX56-212ENST00000485367 GJB5O95377 273 aa11.99□□□□□ -0.49
DDX56-212ENST00000485367 SLU7O95391 586 aaKnown RBP11.99□□□□□ -0.49
DDX56-212ENST00000485367 CHRNA1P02708 482 aa11.99□□□□□ -0.49
DDX56-212ENST00000485367 SETQ01105 290 aaPredicted RBP11.99□□□□□ -0.49
DDX56-212ENST00000485367 FAM160B1Q5W0V3 765 aa11.99□□□□□ -0.49
DDX56-212ENST00000485367 MIS18BP1Q6P0N0 1132 aa11.99□□□□□ -0.49
DDX56-212ENST00000485367 ABHD15Q6UXT9 468 aa11.99□□□□□ -0.49
DDX56-212ENST00000485367 TRAPPC12Q8WVT3 735 aa11.99□□□□□ -0.49
DDX56-212ENST00000485367 AIFM3Q96NN9 605 aa11.99□□□□□ -0.49
DDX56-212ENST00000485367 ZSCAN16Q9H4T2 348 aaPredicted RBP11.99□□□□□ -0.49
DDX56-212ENST00000485367 TBC1D22BQ9NU19 505 aa11.99□□□□□ -0.49
DDX56-212ENST00000485367 TCEAL9Q9UHQ7 104 aa11.99□□□□□ -0.49
DDX56-212ENST00000485367 CFAP45Q9UL16 551 aa11.99□□□□□ -0.49
DDX56-212ENST00000485367 PCDHA4Q9UN74 947 aa11.99□□□□□ -0.49
DDX56-212ENST00000485367 EYSQ5T1H1 3165 aa11.99□□□□□ -0.49
DDX56-212ENST00000485367 MYH9P35579 1960 aaKnown RBP11.98□□□□□ -0.49
DDX56-212ENST00000485367 POTEB3A0JP26 581 aa11.98□□□□□ -0.49
DDX56-212ENST00000485367 CDKL5O76039 1030 aa11.98□□□□□ -0.49
DDX56-212ENST00000485367 GHRP10912 638 aa11.98□□□□□ -0.49
DDX56-212ENST00000485367 CIITAP33076 1130 aa11.98□□□□□ -0.49
DDX56-212ENST00000485367 SCRN1Q12765 414 aa11.98□□□□□ -0.49
DDX56-212ENST00000485367 BMS1Q14692 1282 aaKnown RBP11.98□□□□□ -0.49
DDX56-212ENST00000485367 CAMK4Q16566 473 aa11.98□□□□□ -0.49
DDX56-212ENST00000485367 STX1AQ16623 288 aa11.98□□□□□ -0.49
DDX56-212ENST00000485367 KMT5BQ4FZB7 885 aa11.98□□□□□ -0.49
DDX56-212ENST00000485367 SWSAP1Q6NVH7 229 aa11.98□□□□□ -0.49
DDX56-212ENST00000485367 POTEBQ6S5H4 581 aa11.98□□□□□ -0.49
DDX56-212ENST00000485367 RPAINQ86UA6 219 aa11.98□□□□□ -0.49
DDX56-212ENST00000485367 MYOCDQ8IZQ8 938 aa11.98□□□□□ -0.49
DDX56-212ENST00000485367 RAD9AQ99638 391 aa11.98□□□□□ -0.49
DDX56-212ENST00000485367 ZNF302Q9NR11 478 aa11.98□□□□□ -0.49
DDX56-212ENST00000485367 IMPACTQ9P2X3 320 aa11.98□□□□□ -0.49
DDX56-212ENST00000485367 TPCN1Q9ULQ1 816 aa11.98□□□□□ -0.49
DDX56-212ENST00000485367 PRUNE2Q8WUY3 3088 aa11.98□□□□□ -0.49
DDX56-212ENST00000485367 IGKV6D-21A0A0A0MT36 114 aa11.97□□□□□ -0.49
DDX56-212ENST00000485367 PFKFB2O60825 505 aa11.97□□□□□ -0.49
DDX56-212ENST00000485367 DTNBO60941 627 aa11.97□□□□□ -0.49
DDX56-212ENST00000485367 SLC26A2P50443 739 aa11.97□□□□□ -0.49
DDX56-212ENST00000485367 USP11P51784 963 aa11.97□□□□□ -0.49
DDX56-212ENST00000485367 MRPS6P82932 125 aaKnown RBP11.97□□□□□ -0.49
DDX56-212ENST00000485367 IQCB1Q15051 598 aa11.97□□□□□ -0.49
DDX56-212ENST00000485367 ATL3Q6DD88 541 aa11.97□□□□□ -0.49
DDX56-212ENST00000485367 PDXDC2PQ6P474 469 aa11.97□□□□□ -0.49
DDX56-212ENST00000485367 SPRED2Q7Z698 418 aa11.97□□□□□ -0.49
DDX56-212ENST00000485367 CCDC60Q8IWA6 550 aaPredicted RBP11.97□□□□□ -0.49
DDX56-212ENST00000485367 CKAP2LQ8IYA6 745 aa11.97□□□□□ -0.49
DDX56-212ENST00000485367 BLIDQ8IZY5 108 aa11.97□□□□□ -0.49
DDX56-212ENST00000485367 PLCD3Q8N3E9 789 aa11.97□□□□□ -0.49
DDX56-212ENST00000485367 MICALL1Q8N3F8 863 aa11.97□□□□□ -0.49
DDX56-212ENST00000485367 ATP8B4Q8TF62 1192 aa11.97□□□□□ -0.49
DDX56-212ENST00000485367 IFIH1Q9BYX4 1025 aaKnown RBP11.97□□□□□ -0.49
DDX56-212ENST00000485367 PCDHA2Q9Y5H9 948 aa11.97□□□□□ -0.49
DDX56-212ENST00000485367 CDY2AQ9Y6F7 541 aa11.97□□□□□ -0.49
DDX56-212ENST00000485367 UNC80Q8N2C7 3258 aa11.97□□□□□ -0.49
DDX56-212ENST00000485367 SIP14410 1827 aa11.97□□□□□ -0.49
DDX56-212ENST00000485367 EPOPA6NHQ4 379 aa11.97□□□□□ -0.49
DDX56-212ENST00000485367 TRANK1O15050 2925 aa11.97□□□□□ -0.49
DDX56-212ENST00000485367 UPP2O95045 317 aa11.97□□□□□ -0.49
DDX56-212ENST00000485367 SKILP12757 684 aa11.97□□□□□ -0.49
DDX56-212ENST00000485367 KRT76Q01546 638 aa11.97□□□□□ -0.49
DDX56-212ENST00000485367 MGAT3Q09327 533 aa11.97□□□□□ -0.49
DDX56-212ENST00000485367 TMEM62Q0P6H9 643 aa11.97□□□□□ -0.49
DDX56-212ENST00000485367 MKRN4PQ13434 485 aaPredicted RBP11.97□□□□□ -0.49
DDX56-212ENST00000485367 LPIN1Q14693 890 aa11.97□□□□□ -0.49
DDX56-212ENST00000485367 TPRNQ4KMQ1 711 aa11.97□□□□□ -0.49
DDX56-212ENST00000485367 ZNF746Q6NUN9 644 aaPredicted RBP11.97□□□□□ -0.49
DDX56-212ENST00000485367 TBCKQ8TEA7 893 aa11.97□□□□□ -0.49
DDX56-212ENST00000485367 APBB2Q92870 758 aa11.97□□□□□ -0.49
DDX56-212ENST00000485367 LENG9Q96B70 501 aa11.97□□□□□ -0.49
DDX56-212ENST00000485367 DNAJC25Q9H1X3 360 aa11.97□□□□□ -0.49
DDX56-212ENST00000485367 L2HGDHQ9H9P8 463 aa11.97□□□□□ -0.49
DDX56-212ENST00000485367 MTUS1Q9ULD2 1270 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms