RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 ZNF652Q9Y2D9 606 aa5.75□□□□□ -1.49
SSBP1-211ENST00000484178 TIMM13Q9Y5L4 95 aaPredicted RBP5.75□□□□□ -1.49
SSBP1-211ENST00000484178 NEO1Q92859 1461 aa5.75□□□□□ -1.49
SSBP1-211ENST00000484178 QRICH2Q9H0J4 1663 aa5.75□□□□□ -1.49
SSBP1-211ENST00000484178 POGZQ7Z3K3 1410 aa5.74□□□□□ -1.49
SSBP1-211ENST00000484178 NOP56O00567 594 aaKnown RBP5.74□□□□□ -1.49
SSBP1-211ENST00000484178 DIAPH1O60610 1272 aaKnown RBP5.74□□□□□ -1.49
SSBP1-211ENST00000484178 TRIM27P14373 513 aa5.74□□□□□ -1.49
SSBP1-211ENST00000484178 RPL11P62913 178 aaKnown RBP5.74□□□□□ -1.49
SSBP1-211ENST00000484178 NKX3-2P78367 333 aa5.74□□□□□ -1.49
SSBP1-211ENST00000484178 CDSNQ15517 529 aa5.74□□□□□ -1.49
SSBP1-211ENST00000484178 KLHL40Q2TBA0 621 aa5.74□□□□□ -1.49
SSBP1-211ENST00000484178 TNNI3KQ59H18 835 aa5.74□□□□□ -1.49
SSBP1-211ENST00000484178 GTF2IRD2BQ6EKJ0 949 aa5.74□□□□□ -1.49
SSBP1-211ENST00000484178 GTF2IRD2Q86UP8 949 aa5.74□□□□□ -1.49
SSBP1-211ENST00000484178 CHD1LQ86WJ1 897 aa5.74□□□□□ -1.49
SSBP1-211ENST00000484178 ITPRIPQ8IWB1 547 aa5.74□□□□□ -1.49
SSBP1-211ENST00000484178 LILRB2Q8N423 598 aa5.74□□□□□ -1.49
SSBP1-211ENST00000484178 MBD6Q96DN6 1003 aa5.74□□□□□ -1.49
SSBP1-211ENST00000484178 PLEKHF1Q96S99 279 aa5.74□□□□□ -1.49
SSBP1-211ENST00000484178 PPP1R9BQ96SB3 815 aa5.74□□□□□ -1.49
SSBP1-211ENST00000484178 CDK5RAP1Q96SZ6 601 aaKnown RBP5.74□□□□□ -1.49
SSBP1-211ENST00000484178 CD248Q9HCU0 757 aa5.74□□□□□ -1.49
SSBP1-211ENST00000484178 PPP4R1LQ9P1A2 415 aa5.74□□□□□ -1.49
SSBP1-211ENST00000484178 R3HCC1Q9Y3T6 440 aaKnown RBP5.74□□□□□ -1.49
SSBP1-211ENST00000484178 PPLO60437 1756 aa5.74□□□□□ -1.49
SSBP1-211ENST00000484178 PIK3C2BO00750 1634 aa5.74□□□□□ -1.49
SSBP1-211ENST00000484178 PTCH1Q13635 1447 aa5.74□□□□□ -1.49
SSBP1-211ENST00000484178 NPATQ14207 1427 aa5.74□□□□□ -1.49
SSBP1-211ENST00000484178 ZNF536O15090 1300 aa5.74□□□□□ -1.49
SSBP1-211ENST00000484178 COL3A1P02461 1466 aaPredicted RBP5.73□□□□□ -1.49
SSBP1-211ENST00000484178 ATP7BP35670 1465 aa5.73□□□□□ -1.49
SSBP1-211ENST00000484178 AATKQ6ZMQ8 1374 aa5.73□□□□□ -1.49
SSBP1-211ENST00000484178 SMAD7O15105 426 aaKnown RBP5.73□□□□□ -1.49
SSBP1-211ENST00000484178 SUV39H1O43463 412 aa5.73□□□□□ -1.49
SSBP1-211ENST00000484178 CYP7B1O75881 506 aa5.73□□□□□ -1.49
SSBP1-211ENST00000484178 SCG5P05408 212 aa5.73□□□□□ -1.49
SSBP1-211ENST00000484178 NCAPHQ15003 741 aa5.73□□□□□ -1.49
SSBP1-211ENST00000484178 PPP2R5EQ16537 467 aa5.73□□□□□ -1.49
SSBP1-211ENST00000484178 HSP90AB2PQ58FF8 381 aa5.73□□□□□ -1.49
SSBP1-211ENST00000484178 HOMER1Q86YM7 354 aa5.73□□□□□ -1.49
SSBP1-211ENST00000484178 CELF2-AS1Q8N7Q2 184 aa5.73□□□□□ -1.49
SSBP1-211ENST00000484178 DNAJC7Q99615 494 aa5.73□□□□□ -1.49
SSBP1-211ENST00000484178 TYW1Q9NV66 732 aaKnown RBP5.73□□□□□ -1.49
SSBP1-211ENST00000484178 TMEM260Q9NX78 707 aa5.73□□□□□ -1.49
SSBP1-211ENST00000484178 HSPBP1Q9NZL4 362 aa5.73□□□□□ -1.49
SSBP1-211ENST00000484178 RIPOR2Q9Y4F9 1068 aa5.73□□□□□ -1.49
SSBP1-211ENST00000484178 DLC1Q96QB1 1528 aa5.73□□□□□ -1.49
SSBP1-211ENST00000484178 SOS1Q07889 1333 aaPredicted RBP5.73□□□□□ -1.49
SSBP1-211ENST00000484178 CLTCQ00610 1675 aaKnown RBP5.72□□□□□ -1.49
SSBP1-211ENST00000484178 GLI2P10070 1586 aa5.72□□□□□ -1.49
SSBP1-211ENST00000484178 ESYT3A0FGR9 886 aa5.72□□□□□ -1.49
SSBP1-211ENST00000484178 CCDC85CA6NKD9 419 aa5.72□□□□□ -1.49
SSBP1-211ENST00000484178 CYR61O00622 381 aa5.72□□□□□ -1.49
SSBP1-211ENST00000484178 REC8O95072 547 aa5.72□□□□□ -1.49
SSBP1-211ENST00000484178 MBD3O95983 291 aa5.72□□□□□ -1.49
SSBP1-211ENST00000484178 FSHBP01225 129 aa5.72□□□□□ -1.49
SSBP1-211ENST00000484178 TACR2P21452 398 aa5.72□□□□□ -1.49
SSBP1-211ENST00000484178 HOXC12P31275 282 aa5.72□□□□□ -1.49
SSBP1-211ENST00000484178 ACVRL1P37023 503 aa5.72□□□□□ -1.49
SSBP1-211ENST00000484178 EPHB4P54760 987 aa5.72□□□□□ -1.49
SSBP1-211ENST00000484178 GYS2P54840 703 aa5.72□□□□□ -1.49
SSBP1-211ENST00000484178 EXOSC9Q06265 439 aaKnown RBP5.72□□□□□ -1.49
SSBP1-211ENST00000484178 RASGRF1Q13972 1273 aa5.72□□□□□ -1.49
SSBP1-211ENST00000484178 CHRNA2Q15822 529 aa5.72□□□□□ -1.49
SSBP1-211ENST00000484178 EMC4Q5J8M3 183 aa5.72□□□□□ -1.49
SSBP1-211ENST00000484178 ACBD5Q5T8D3 534 aaPredicted RBP5.72□□□□□ -1.49
SSBP1-211ENST00000484178 CRIP3Q6Q6R5 217 aa5.72□□□□□ -1.49
SSBP1-211ENST00000484178 LIMS2Q7Z4I7 341 aa5.72□□□□□ -1.49
SSBP1-211ENST00000484178 STK32CQ86UX6 486 aa5.72□□□□□ -1.49
SSBP1-211ENST00000484178 NLRP10Q86W26 655 aa5.72□□□□□ -1.49
SSBP1-211ENST00000484178 RPAP2Q8IXW5 612 aaPredicted RBP5.72□□□□□ -1.49
SSBP1-211ENST00000484178 SSH1Q8WYL5 1049 aa5.72□□□□□ -1.49
SSBP1-211ENST00000484178 KISS1RQ969F8 398 aaPredicted RBP5.72□□□□□ -1.49
SSBP1-211ENST00000484178 SLC12A5Q9H2X9 1139 aa5.72□□□□□ -1.49
SSBP1-211ENST00000484178 NEXMIFQ5QGS0 1516 aa5.72□□□□□ -1.49
SSBP1-211ENST00000484178 CPSF1Q10570 1443 aaKnown RBP5.72□□□□□ -1.49
SSBP1-211ENST00000484178 ANKRD26Q9UPS8 1709 aa5.71□□□□□ -1.49
SSBP1-211ENST00000484178 KIDINS220Q9ULH0 1771 aa5.71□□□□□ -1.5
SSBP1-211ENST00000484178 ARHGEF40Q8TER5 1519 aa5.71□□□□□ -1.5
SSBP1-211ENST00000484178 TULP4Q9NRJ4 1543 aa5.71□□□□□ -1.5
SSBP1-211ENST00000484178 LOC102724159A0A0B4J2E5 919 aa5.71□□□□□ -1.5
SSBP1-211ENST00000484178 ARNTLO00327 626 aa5.71□□□□□ -1.5
SSBP1-211ENST00000484178 HMMRO75330 724 aa5.71□□□□□ -1.5
SSBP1-211ENST00000484178 TADA3O75528 432 aa5.71□□□□□ -1.5
SSBP1-211ENST00000484178 S100BP04271 92 aaPredicted RBP5.71□□□□□ -1.5
SSBP1-211ENST00000484178 C6P13671 934 aa5.71□□□□□ -1.5
SSBP1-211ENST00000484178 FPR2P25090 351 aa5.71□□□□□ -1.5
SSBP1-211ENST00000484178 RIPK4P57078 832 aa5.71□□□□□ -1.5
SSBP1-211ENST00000484178 KCNAB2Q13303 367 aa5.71□□□□□ -1.5
SSBP1-211ENST00000484178 HSP90AA2PQ14568 343 aaPredicted RBP5.71□□□□□ -1.5
SSBP1-211ENST00000484178 PWP2Q15269 919 aaKnown RBP5.71□□□□□ -1.5
SSBP1-211ENST00000484178 DDR2Q16832 855 aa5.71□□□□□ -1.5
SSBP1-211ENST00000484178 C16orf86Q6ZW13 317 aa5.71□□□□□ -1.5
SSBP1-211ENST00000484178 CEP68Q76N32 757 aa5.71□□□□□ -1.5
SSBP1-211ENST00000484178 ZSCAN30Q86W11 494 aa5.71□□□□□ -1.5
SSBP1-211ENST00000484178 CCDC103Q8IW40 242 aa5.71□□□□□ -1.5
SSBP1-211ENST00000484178 Q8N1X5 172 aa5.71□□□□□ -1.5
SSBP1-211ENST00000484178 FAM169BQ8N8A8 192 aa5.71□□□□□ -1.5
SSBP1-211ENST00000484178 SYAP1Q96A49 352 aaPredicted RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms