RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 HCSTQ9UBK5 93 aa13.62□□□□□ -0.23
HDLBP-239ENST00000483086 SQORQ9Y6N5 450 aa13.62□□□□□ -0.23
HDLBP-239ENST00000483086 CCDC194A0A1B0GVG4 234 aa13.61□□□□□ -0.23
HDLBP-239ENST00000483086 ZBTB39O15060 712 aa13.61□□□□□ -0.23
HDLBP-239ENST00000483086 CCNT1O60563 726 aaKnown RBP13.61□□□□□ -0.23
HDLBP-239ENST00000483086 MMP1P03956 469 aa13.61□□□□□ -0.23
HDLBP-239ENST00000483086 SFNP31947 248 aa13.61□□□□□ -0.23
HDLBP-239ENST00000483086 GUCY1B3Q02153 619 aa13.61□□□□□ -0.23
HDLBP-239ENST00000483086 PAK2Q13177 524 aa13.61□□□□□ -0.23
HDLBP-239ENST00000483086 PLA2G4FQ68DD2 849 aa13.61□□□□□ -0.23
HDLBP-239ENST00000483086 ANO5Q75V66 913 aa13.61□□□□□ -0.23
HDLBP-239ENST00000483086 METTL13Q8N6R0 699 aa13.61□□□□□ -0.23
HDLBP-239ENST00000483086 THEGQ9P2T0 379 aa13.61□□□□□ -0.23
HDLBP-239ENST00000483086 ST3GAL5Q9UNP4 418 aa13.61□□□□□ -0.23
HDLBP-239ENST00000483086 ADGRA3Q8IWK6 1321 aa13.61□□□□□ -0.23
HDLBP-239ENST00000483086 TRIOO75962 3097 aa13.6□□□□□ -0.23
HDLBP-239ENST00000483086 IGKV6-21A0A0C4DH24 114 aa13.6□□□□□ -0.23
HDLBP-239ENST00000483086 CSDE1O75534 798 aaKnown RBP13.6□□□□□ -0.23
HDLBP-239ENST00000483086 CD2BP2O95400 341 aaKnown RBP13.6□□□□□ -0.23
HDLBP-239ENST00000483086 FGFR4P22455 802 aa13.6□□□□□ -0.23
HDLBP-239ENST00000483086 KRT2P35908 639 aa13.6□□□□□ -0.23
HDLBP-239ENST00000483086 KCNQ1P51787 676 aa13.6□□□□□ -0.23
HDLBP-239ENST00000483086 NLRP11P59045 1033 aaKnown RBP13.6□□□□□ -0.23
HDLBP-239ENST00000483086 NFX1Q12986 1120 aaKnown RBP13.6□□□□□ -0.23
HDLBP-239ENST00000483086 PPP2R5CQ13362 524 aa13.6□□□□□ -0.23
HDLBP-239ENST00000483086 DSC3Q14574 896 aa13.6□□□□□ -0.23
HDLBP-239ENST00000483086 MTERF2Q49AM1 385 aa13.6□□□□□ -0.23
HDLBP-239ENST00000483086 TMEM192Q8IY95 271 aa13.6□□□□□ -0.23
HDLBP-239ENST00000483086 DIS3L2Q8IYB7 885 aaKnown RBP13.6□□□□□ -0.23
HDLBP-239ENST00000483086 FBXO22Q8NEZ5 403 aa13.6□□□□□ -0.23
HDLBP-239ENST00000483086 TNPO1Q92973 898 aaKnown RBP13.6□□□□□ -0.23
HDLBP-239ENST00000483086 NIFKQ9BYG3 293 aaKnown RBP13.6□□□□□ -0.23
HDLBP-239ENST00000483086 RGL1Q9NZL6 768 aa13.6□□□□□ -0.23
HDLBP-239ENST00000483086 SEPT9Q9UHD8 586 aaPredicted RBP13.6□□□□□ -0.23
HDLBP-239ENST00000483086 MRPL42Q9Y6G3 142 aaKnown RBP13.6□□□□□ -0.23
HDLBP-239ENST00000483086 C9IYK1 514 aa13.59□□□□□ -0.23
HDLBP-239ENST00000483086 H3BNC9 293 aa13.59□□□□□ -0.23
HDLBP-239ENST00000483086 M0QZ92 97 aa13.59□□□□□ -0.23
HDLBP-239ENST00000483086 RPS6KA5O75582 802 aa13.59□□□□□ -0.23
HDLBP-239ENST00000483086 RBM25P49756 843 aaKnown RBP13.59□□□□□ -0.23
HDLBP-239ENST00000483086 GPC3P51654 580 aa13.59□□□□□ -0.23
HDLBP-239ENST00000483086 CRYBB1P53674 252 aaPredicted RBP13.59□□□□□ -0.23
HDLBP-239ENST00000483086 NPEPPSP55786 919 aa13.59□□□□□ -0.23
HDLBP-239ENST00000483086 CAMK1Q14012 370 aa13.59□□□□□ -0.23
HDLBP-239ENST00000483086 RDM1Q8NG50 284 aa13.59□□□□□ -0.23
HDLBP-239ENST00000483086 CLP1Q92989 425 aaKnown RBP13.59□□□□□ -0.23
HDLBP-239ENST00000483086 FAM167AQ96KS9 214 aa13.59□□□□□ -0.23
HDLBP-239ENST00000483086 NECAB3Q96P71 396 aaPredicted RBP13.59□□□□□ -0.23
HDLBP-239ENST00000483086 ASB2Q96Q27 587 aa13.59□□□□□ -0.23
HDLBP-239ENST00000483086 TMEM60Q9H2L4 133 aa13.59□□□□□ -0.23
HDLBP-239ENST00000483086 RNF19AQ9NV58 838 aa13.59□□□□□ -0.23
HDLBP-239ENST00000483086 LIMCH1Q9UPQ0 1083 aa13.59□□□□□ -0.23
HDLBP-239ENST00000483086 AKT3Q9Y243 479 aa13.59□□□□□ -0.23
HDLBP-239ENST00000483086 GRM6O15303 877 aa13.58□□□□□ -0.24
HDLBP-239ENST00000483086 MAGEB2O15479 319 aa13.58□□□□□ -0.24
HDLBP-239ENST00000483086 GTPBP6O43824 516 aaPredicted RBP13.58□□□□□ -0.24
HDLBP-239ENST00000483086 RPLP2P05387 115 aaKnown RBP13.58□□□□□ -0.24
HDLBP-239ENST00000483086 BMP1P13497 986 aa13.58□□□□□ -0.24
HDLBP-239ENST00000483086 IBSPP21815 317 aaPredicted RBP13.58□□□□□ -0.24
HDLBP-239ENST00000483086 DNAJB1P25685 340 aa13.58□□□□□ -0.24
HDLBP-239ENST00000483086 GPM6BQ13491 265 aa13.58□□□□□ -0.24
HDLBP-239ENST00000483086 PAN2Q504Q3 1202 aaKnown RBP13.58□□□□□ -0.24
HDLBP-239ENST00000483086 XKR3Q5GH77 459 aa13.58□□□□□ -0.24
HDLBP-239ENST00000483086 TJAP1Q5JTD0 557 aa13.58□□□□□ -0.24
HDLBP-239ENST00000483086 FAM102BQ5T8I3 360 aa13.58□□□□□ -0.24
HDLBP-239ENST00000483086 NPAS4Q8IUM7 802 aa13.58□□□□□ -0.24
HDLBP-239ENST00000483086 KSR1Q8IVT5 923 aa13.58□□□□□ -0.24
HDLBP-239ENST00000483086 FIBCD1Q8N539 461 aa13.58□□□□□ -0.24
HDLBP-239ENST00000483086 ATXN2LQ8WWM7 1075 aaKnown RBP13.58□□□□□ -0.24
HDLBP-239ENST00000483086 WASF1Q92558 559 aa13.58□□□□□ -0.24
HDLBP-239ENST00000483086 FAM20AQ96MK3 541 aa13.58□□□□□ -0.24
HDLBP-239ENST00000483086 ADAM2Q99965 735 aa13.58□□□□□ -0.24
HDLBP-239ENST00000483086 FTHL17Q9BXU8 183 aa13.58□□□□□ -0.24
HDLBP-239ENST00000483086 RGS18Q9NS28 235 aa13.58□□□□□ -0.24
HDLBP-239ENST00000483086 NRBP2Q9NSY0 501 aa13.58□□□□□ -0.24
HDLBP-239ENST00000483086 TCEAL9Q9UHQ7 104 aa13.58□□□□□ -0.24
HDLBP-239ENST00000483086 CEP131Q9UPN4 1083 aa13.58□□□□□ -0.24
HDLBP-239ENST00000483086 DDX11L8A8MPP1 907 aa13.57□□□□□ -0.24
HDLBP-239ENST00000483086 C5orf67F2Z3F1 127 aa13.57□□□□□ -0.24
HDLBP-239ENST00000483086 GCFC2P16383 781 aaKnown RBP13.57□□□□□ -0.24
HDLBP-239ENST00000483086 XBP1P17861 261 aa13.57□□□□□ -0.24
HDLBP-239ENST00000483086 SARSP49591 514 aaKnown RBP13.57□□□□□ -0.24
HDLBP-239ENST00000483086 PSMC5P62195 406 aa13.57□□□□□ -0.24
HDLBP-239ENST00000483086 TBC1D8BQ0IIM8 1120 aa13.57□□□□□ -0.24
HDLBP-239ENST00000483086 CTTNQ14247 550 aaKnown RBP13.57□□□□□ -0.24
HDLBP-239ENST00000483086 NCAPH2Q6IBW4 605 aa13.57□□□□□ -0.24
HDLBP-239ENST00000483086 DYDC2Q96IM9 177 aa13.57□□□□□ -0.24
HDLBP-239ENST00000483086 MTMR9Q96QG7 549 aa13.57□□□□□ -0.24
HDLBP-239ENST00000483086 BMP2KQ9NSY1 1161 aaPredicted RBP13.57□□□□□ -0.24
HDLBP-239ENST00000483086 LMCD1Q9NZU5 365 aa13.57□□□□□ -0.24
HDLBP-239ENST00000483086 A0A087WWV3 80 aa13.56□□□□□ -0.24
HDLBP-239ENST00000483086 A0A087WZ62 844 aa13.56□□□□□ -0.24
HDLBP-239ENST00000483086 TBX3O15119 743 aa13.56□□□□□ -0.24
HDLBP-239ENST00000483086 MAFO75444 373 aaPredicted RBP13.56□□□□□ -0.24
HDLBP-239ENST00000483086 FGFR1P11362 822 aa13.56□□□□□ -0.24
HDLBP-239ENST00000483086 DARSP14868 501 aaKnown RBP13.56□□□□□ -0.24
HDLBP-239ENST00000483086 ATF7P17544 494 aaPredicted RBP13.56□□□□□ -0.24
HDLBP-239ENST00000483086 CTNNB1P35222 781 aa13.56□□□□□ -0.24
HDLBP-239ENST00000483086 BMPR1AP36894 532 aa13.56□□□□□ -0.24
HDLBP-239ENST00000483086 QARSP47897 775 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms