RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 CCM2LQ9NUG4 571 aaPredicted RBP7.73□□□□□ -1.17
SF3B1-210ENST00000482158 PCDHGA9Q9Y5G4 932 aaKnown RBP7.73□□□□□ -1.17
SF3B1-210ENST00000482158 PCDHGA8Q9Y5G5 932 aa7.73□□□□□ -1.17
SF3B1-210ENST00000482158 PCDHGA7Q9Y5G6 932 aa7.73□□□□□ -1.17
SF3B1-210ENST00000482158 PCDHGA6Q9Y5G7 932 aa7.73□□□□□ -1.17
SF3B1-210ENST00000482158 PCDHGA3Q9Y5H0 932 aa7.73□□□□□ -1.17
SF3B1-210ENST00000482158 PCDHGA2Q9Y5H1 932 aa7.73□□□□□ -1.17
SF3B1-210ENST00000482158 WASHC2AQ641Q2 1341 aa7.73□□□□□ -1.17
SF3B1-210ENST00000482158 SHTN1A0MZ66 631 aa7.72□□□□□ -1.17
SF3B1-210ENST00000482158 BTBD11A6QL63 1104 aa7.72□□□□□ -1.17
SF3B1-210ENST00000482158 APOL3O95236 402 aa7.72□□□□□ -1.17
SF3B1-210ENST00000482158 PFKMP08237 780 aa7.72□□□□□ -1.17
SF3B1-210ENST00000482158 RBP3P10745 1247 aa7.72□□□□□ -1.17
SF3B1-210ENST00000482158 ENPP1P22413 925 aa7.72□□□□□ -1.17
SF3B1-210ENST00000482158 MLLT6P55198 1093 aaPredicted RBP7.72□□□□□ -1.17
SF3B1-210ENST00000482158 PTPN21Q16825 1174 aa7.72□□□□□ -1.17
SF3B1-210ENST00000482158 SLC41A1Q8IVJ1 513 aa7.72□□□□□ -1.17
SF3B1-210ENST00000482158 TTLL6Q8N841 843 aa7.72□□□□□ -1.17
SF3B1-210ENST00000482158 CALML6Q8TD86 181 aa7.72□□□□□ -1.17
SF3B1-210ENST00000482158 CHMP4CQ96CF2 233 aa7.72□□□□□ -1.17
SF3B1-210ENST00000482158 EAF2Q96CJ1 260 aaPredicted RBP7.72□□□□□ -1.17
SF3B1-210ENST00000482158 FAM84AQ96KN4 292 aa7.72□□□□□ -1.17
SF3B1-210ENST00000482158 CLIC6Q96NY7 704 aa7.72□□□□□ -1.17
SF3B1-210ENST00000482158 DENND2AQ9ULE3 1009 aa7.72□□□□□ -1.17
SF3B1-210ENST00000482158 SPEF1Q9Y4P9 236 aa7.72□□□□□ -1.17
SF3B1-210ENST00000482158 IRAK3Q9Y616 596 aa7.72□□□□□ -1.17
SF3B1-210ENST00000482158 PMF1-BGLAPU3KQ54 211 aa7.72□□□□□ -1.17
SF3B1-210ENST00000482158 MAFO75444 373 aaPredicted RBP7.71□□□□□ -1.18
SF3B1-210ENST00000482158 PARNO95453 639 aaKnown RBP7.71□□□□□ -1.18
SF3B1-210ENST00000482158 KNG1P01042 644 aa7.71□□□□□ -1.18
SF3B1-210ENST00000482158 APEX1P27695 318 aaKnown RBP7.71□□□□□ -1.18
SF3B1-210ENST00000482158 EPHB1P54762 984 aa7.71□□□□□ -1.18
SF3B1-210ENST00000482158 CD83Q01151 205 aa7.71□□□□□ -1.18
SF3B1-210ENST00000482158 CCDC62Q6P9F0 684 aa7.71□□□□□ -1.18
SF3B1-210ENST00000482158 ATG14Q6ZNE5 492 aa7.71□□□□□ -1.18
SF3B1-210ENST00000482158 KCNK18Q7Z418 384 aa7.71□□□□□ -1.18
SF3B1-210ENST00000482158 ZCCHC14Q8WYQ9 949 aaKnown RBP7.71□□□□□ -1.18
SF3B1-210ENST00000482158 KRTAP4-12Q9BQ66 201 aa7.71□□□□□ -1.18
SF3B1-210ENST00000482158 KRTAP9-9Q9BYP9 154 aa7.71□□□□□ -1.18
SF3B1-210ENST00000482158 KRTAP9-4Q9BYQ2 154 aa7.71□□□□□ -1.18
SF3B1-210ENST00000482158 SLC13A1Q9BZW2 595 aa7.71□□□□□ -1.18
SF3B1-210ENST00000482158 PITHD1Q9GZP4 211 aaPredicted RBP7.71□□□□□ -1.18
SF3B1-210ENST00000482158 CD320Q9NPF0 282 aa7.71□□□□□ -1.18
SF3B1-210ENST00000482158 CROTQ9UKG9 612 aa7.71□□□□□ -1.18
SF3B1-210ENST00000482158 EID1Q9Y6B2 187 aa7.71□□□□□ -1.18
SF3B1-210ENST00000482158 LPLP06858 475 aa7.7□□□□□ -1.18
SF3B1-210ENST00000482158 C1QTNF9P0C862 333 aa7.7□□□□□ -1.18
SF3B1-210ENST00000482158 PI3P19957 117 aa7.7□□□□□ -1.18
SF3B1-210ENST00000482158 RAB27AP51159 221 aa7.7□□□□□ -1.18
SF3B1-210ENST00000482158 TRIM25Q14258 630 aaKnown RBP7.7□□□□□ -1.18
SF3B1-210ENST00000482158 ODF1Q14990 250 aa7.7□□□□□ -1.18
SF3B1-210ENST00000482158 RGL3Q3MIN7 710 aa7.7□□□□□ -1.18
SF3B1-210ENST00000482158 VWA3BQ502W6 1294 aa7.7□□□□□ -1.18
SF3B1-210ENST00000482158 PGM2L1Q6PCE3 622 aa7.7□□□□□ -1.18
SF3B1-210ENST00000482158 BCL6BQ8N143 479 aaPredicted RBP7.7□□□□□ -1.18
SF3B1-210ENST00000482158 HOOK2Q96ED9 719 aa7.7□□□□□ -1.18
SF3B1-210ENST00000482158 NUMBLQ9Y6R0 609 aa7.7□□□□□ -1.18
SF3B1-210ENST00000482158 MYPNQ86TC9 1320 aa7.7□□□□□ -1.18
SF3B1-210ENST00000482158 AKAP10O43572 662 aa7.69□□□□□ -1.18
SF3B1-210ENST00000482158 FARP2O94887 1054 aaPredicted RBP7.69□□□□□ -1.18
SF3B1-210ENST00000482158 CELA3BP08861 270 aa7.69□□□□□ -1.18
SF3B1-210ENST00000482158 MTNR1BP49286 362 aa7.69□□□□□ -1.18
SF3B1-210ENST00000482158 BCAR1P56945 870 aa7.69□□□□□ -1.18
SF3B1-210ENST00000482158 KRT85P78386 507 aa7.69□□□□□ -1.18
SF3B1-210ENST00000482158 SRSF2Q01130 221 aaKnown RBP7.69□□□□□ -1.18
SF3B1-210ENST00000482158 NFE2Q16621 373 aaPredicted RBP7.69□□□□□ -1.18
SF3B1-210ENST00000482158 UGT8Q16880 541 aa7.69□□□□□ -1.18
SF3B1-210ENST00000482158 OGFOD2Q6N063 350 aa7.69□□□□□ -1.18
SF3B1-210ENST00000482158 CNKSR3Q6P9H4 555 aa7.69□□□□□ -1.18
SF3B1-210ENST00000482158 CXXC5Q7LFL8 322 aaKnown RBP7.69□□□□□ -1.18
SF3B1-210ENST00000482158 SAPCD2Q86UD0 394 aa7.69□□□□□ -1.18
SF3B1-210ENST00000482158 ZBTB46Q86UZ6 589 aa7.69□□□□□ -1.18
SF3B1-210ENST00000482158 FERMT2Q96AC1 680 aa7.69□□□□□ -1.18
SF3B1-210ENST00000482158 PWWP2AQ96N64 755 aa7.69□□□□□ -1.18
SF3B1-210ENST00000482158 WRNIP1Q96S55 665 aa7.69□□□□□ -1.18
SF3B1-210ENST00000482158 WNT8AQ9H1J5 351 aa7.69□□□□□ -1.18
SF3B1-210ENST00000482158 MTG2Q9H4K7 406 aa7.69□□□□□ -1.18
SF3B1-210ENST00000482158 KCNG1Q9UIX4 513 aa7.69□□□□□ -1.18
SF3B1-210ENST00000482158 EDARQ9UNE0 448 aa7.69□□□□□ -1.18
SF3B1-210ENST00000482158 SMG5Q9UPR3 1016 aaKnown RBP7.69□□□□□ -1.18
SF3B1-210ENST00000482158 KCTD3Q9Y597 815 aa7.69□□□□□ -1.18
SF3B1-210ENST00000482158 A0A0A6YYJ9 748 aa7.68□□□□□ -1.18
SF3B1-210ENST00000482158 OPHN1O60890 802 aa7.68□□□□□ -1.18
SF3B1-210ENST00000482158 CFBP00751 764 aa7.68□□□□□ -1.18
SF3B1-210ENST00000482158 CHGBP05060 677 aa7.68□□□□□ -1.18
SF3B1-210ENST00000482158 ZNF28P17035 718 aa7.68□□□□□ -1.18
SF3B1-210ENST00000482158 ANTXR2P58335 489 aa7.68□□□□□ -1.18
SF3B1-210ENST00000482158 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.68□□□□□ -1.18
SF3B1-210ENST00000482158 TOR2AQ5JU69 321 aa7.68□□□□□ -1.18
SF3B1-210ENST00000482158 ZNF648Q5T619 568 aaPredicted RBP7.68□□□□□ -1.18
SF3B1-210ENST00000482158 DPP8Q6V1X1 898 aaPredicted RBP7.68□□□□□ -1.18
SF3B1-210ENST00000482158 ZNF526Q8TF50 670 aaPredicted RBP7.68□□□□□ -1.18
SF3B1-210ENST00000482158 RTFDC1Q9BY42 306 aaPredicted RBP7.68□□□□□ -1.18
SF3B1-210ENST00000482158 HAPLN2Q9GZV7 340 aa7.68□□□□□ -1.18
SF3B1-210ENST00000482158 QRSL1Q9H0R6 528 aaKnown RBP7.68□□□□□ -1.18
SF3B1-210ENST00000482158 KCTD10Q9H3F6 313 aa7.68□□□□□ -1.18
SF3B1-210ENST00000482158 AASDHPPTQ9NRN7 309 aa7.68□□□□□ -1.18
SF3B1-210ENST00000482158 RNF114Q9Y508 228 aa7.68□□□□□ -1.18
SF3B1-210ENST00000482158 KLHL18O94889 574 aa7.67□□□□□ -1.18
SF3B1-210ENST00000482158 ABLIM3O94929 683 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms