RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 C7orf31Q8N865 590 aa12.89□□□□□ -0.35
HPS4-212ENST00000481910 ENGASEQ8NFI3 743 aa12.89□□□□□ -0.35
HPS4-212ENST00000481910 LARP4BQ92615 738 aaKnown RBP12.89□□□□□ -0.35
HPS4-212ENST00000481910 RAD54LQ92698 747 aa12.89□□□□□ -0.35
HPS4-212ENST00000481910 STARD7Q9NQZ5 370 aa12.89□□□□□ -0.35
HPS4-212ENST00000481910 CYP26B1Q9NR63 512 aa12.89□□□□□ -0.35
HPS4-212ENST00000481910 SERTAD1Q9UHV2 236 aa12.89□□□□□ -0.35
HPS4-212ENST00000481910 SCN10AQ9Y5Y9 1956 aa12.88□□□□□ -0.35
HPS4-212ENST00000481910 PLA2G4BP0C869 781 aa12.88□□□□□ -0.35
HPS4-212ENST00000481910 SMIM10L2AP0DMW4 78 aa12.88□□□□□ -0.35
HPS4-212ENST00000481910 SMIM10L2BP0DMW5 78 aa12.88□□□□□ -0.35
HPS4-212ENST00000481910 CAPN2P17655 700 aa12.88□□□□□ -0.35
HPS4-212ENST00000481910 RARRES1P49788 294 aa12.88□□□□□ -0.35
HPS4-212ENST00000481910 MCM6Q14566 821 aa12.88□□□□□ -0.35
HPS4-212ENST00000481910 FAM47CQ5HY64 1035 aa12.88□□□□□ -0.35
HPS4-212ENST00000481910 ANKLE1Q8NAG6 615 aa12.88□□□□□ -0.35
HPS4-212ENST00000481910 SENP6Q9GZR1 1112 aaPredicted RBP12.88□□□□□ -0.35
HPS4-212ENST00000481910 CUEDC2Q9H467 287 aa12.88□□□□□ -0.35
HPS4-212ENST00000481910 SETD4Q9NVD3 440 aa12.88□□□□□ -0.35
HPS4-212ENST00000481910 DACT1Q9NYF0 836 aa12.88□□□□□ -0.35
HPS4-212ENST00000481910 USP25Q9UHP3 1055 aa12.88□□□□□ -0.35
HPS4-212ENST00000481910 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.88□□□□□ -0.35
HPS4-212ENST00000481910 ARHGEF35A5YM69 484 aa12.88□□□□□ -0.35
HPS4-212ENST00000481910 SLFN14P0C7P3 912 aa12.88□□□□□ -0.35
HPS4-212ENST00000481910 MNX1P50219 401 aaPredicted RBP12.88□□□□□ -0.35
HPS4-212ENST00000481910 IGBP1P78318 339 aa12.88□□□□□ -0.35
HPS4-212ENST00000481910 PPFIA1Q13136 1202 aa12.88□□□□□ -0.35
HPS4-212ENST00000481910 ITGA7Q13683 1181 aa12.88□□□□□ -0.35
HPS4-212ENST00000481910 ZNF484Q5JVG2 852 aa12.88□□□□□ -0.35
HPS4-212ENST00000481910 SV2BQ7L1I2 683 aa12.88□□□□□ -0.35
HPS4-212ENST00000481910 SYT2Q8N9I0 419 aaPredicted RBP12.88□□□□□ -0.35
HPS4-212ENST00000481910 CNNM3Q8NE01 707 aa12.88□□□□□ -0.35
HPS4-212ENST00000481910 HDAC6Q9UBN7 1215 aa12.88□□□□□ -0.35
HPS4-212ENST00000481910 LOXHD1Q8IVV2 1947 aa12.88□□□□□ -0.35
HPS4-212ENST00000481910 NRCAMQ92823 1304 aa12.87□□□□□ -0.35
HPS4-212ENST00000481910 RRN3P2A6NIE6 340 aa12.87□□□□□ -0.35
HPS4-212ENST00000481910 ACTN4O43707 911 aaKnown RBP12.87□□□□□ -0.35
HPS4-212ENST00000481910 KINO60870 393 aaKnown RBP12.87□□□□□ -0.35
HPS4-212ENST00000481910 TARBP2Q15633 366 aaKnown RBP12.87□□□□□ -0.35
HPS4-212ENST00000481910 NFKBIBQ15653 356 aa12.87□□□□□ -0.35
HPS4-212ENST00000481910 GRIK4Q16099 956 aa12.87□□□□□ -0.35
HPS4-212ENST00000481910 KRBA2Q6ZNG9 492 aa12.87□□□□□ -0.35
HPS4-212ENST00000481910 GPT2Q8TD30 523 aa12.87□□□□□ -0.35
HPS4-212ENST00000481910 TRAPPC12Q8WVT3 735 aa12.87□□□□□ -0.35
HPS4-212ENST00000481910 STAMQ92783 540 aa12.87□□□□□ -0.35
HPS4-212ENST00000481910 ABHD8Q96I13 439 aa12.87□□□□□ -0.35
HPS4-212ENST00000481910 RNF39Q9H2S5 420 aa12.87□□□□□ -0.35
HPS4-212ENST00000481910 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.87□□□□□ -0.355e-6■■■■□ 23.1
HPS4-212ENST00000481910 GRIN2DO15399 1336 aa12.87□□□□□ -0.35
HPS4-212ENST00000481910 ZBTB42B2RXF5 422 aa12.86□□□□□ -0.35
HPS4-212ENST00000481910 EN2P19622 333 aaPredicted RBP12.86□□□□□ -0.35
HPS4-212ENST00000481910 AFMP43652 599 aa12.86□□□□□ -0.35
HPS4-212ENST00000481910 POLGP54098 1239 aaPredicted RBP12.86□□□□□ -0.35
HPS4-212ENST00000481910 SLC12A3P55017 1021 aa12.86□□□□□ -0.35
HPS4-212ENST00000481910 TBC1D8BQ0IIM8 1120 aa12.86□□□□□ -0.35
HPS4-212ENST00000481910 NFRKBQ6P4R8 1299 aa12.86□□□□□ -0.35
HPS4-212ENST00000481910 PADI6Q6TGC4 694 aa12.86□□□□□ -0.35
HPS4-212ENST00000481910 DIS3LQ8TF46 1054 aaKnown RBP12.86□□□□□ -0.35
HPS4-212ENST00000481910 LMBR1Q8WVP7 490 aa12.86□□□□□ -0.35
HPS4-212ENST00000481910 CCDC34Q96HJ3 373 aa12.86□□□□□ -0.35
HPS4-212ENST00000481910 KBTBD4Q9NVX7 518 aa12.86□□□□□ -0.35
HPS4-212ENST00000481910 COL1A2P08123 1366 aa12.86□□□□□ -0.35
HPS4-212ENST00000481910 C17orf102A2RUQ5 167 aa12.86□□□□□ -0.35
HPS4-212ENST00000481910 USO1O60763 962 aaKnown RBP12.86□□□□□ -0.35
HPS4-212ENST00000481910 DGAT1O75907 488 aa12.86□□□□□ -0.35
HPS4-212ENST00000481910 MBD3O95983 291 aa12.86□□□□□ -0.35
HPS4-212ENST00000481910 GNAT1P11488 350 aa12.86□□□□□ -0.35
HPS4-212ENST00000481910 KLRC1P26715 233 aa12.86□□□□□ -0.35
HPS4-212ENST00000481910 AMPD3Q01432 767 aa12.86□□□□□ -0.35
HPS4-212ENST00000481910 RINT1Q6NUQ1 792 aa12.86□□□□□ -0.35
HPS4-212ENST00000481910 SLC7A3Q8WY07 619 aa12.86□□□□□ -0.35
HPS4-212ENST00000481910 PAWRQ96IZ0 340 aaKnown RBP12.86□□□□□ -0.35
HPS4-212ENST00000481910 TIGD1Q96MW7 591 aa12.86□□□□□ -0.35
HPS4-212ENST00000481910 CEP89Q96ST8 783 aa12.86□□□□□ -0.35
HPS4-212ENST00000481910 TNMDQ9H2S6 317 aa12.86□□□□□ -0.35
HPS4-212ENST00000481910 MAGEF1Q9HAY2 307 aa12.86□□□□□ -0.35
HPS4-212ENST00000481910 BMP2KQ9NSY1 1161 aaPredicted RBP12.86□□□□□ -0.35
HPS4-212ENST00000481910 GTF2IRD1Q9UHL9 959 aa12.86□□□□□ -0.35
HPS4-212ENST00000481910 PPME1Q9Y570 386 aa12.86□□□□□ -0.35
HPS4-212ENST00000481910 TRIP12Q14669 1992 aaPredicted RBP12.85□□□□□ -0.35
HPS4-212ENST00000481910 RFC5P40937 340 aa12.85□□□□□ -0.35
HPS4-212ENST00000481910 ZNF200P98182 395 aaPredicted RBP12.85□□□□□ -0.35
HPS4-212ENST00000481910 RAD51AP2Q09MP3 1159 aa12.85□□□□□ -0.35
HPS4-212ENST00000481910 MARCH8Q5T0T0 291 aa12.85□□□□□ -0.35
HPS4-212ENST00000481910 KANK3Q6NY19 840 aa12.85□□□□□ -0.35
HPS4-212ENST00000481910 MTHFD1LQ6UB35 978 aa12.85□□□□□ -0.35
HPS4-212ENST00000481910 RINLQ6ZS11 566 aa12.85□□□□□ -0.35
HPS4-212ENST00000481910 C1orf186Q6ZWK4 172 aa12.85□□□□□ -0.35
HPS4-212ENST00000481910 MAEAQ7L5Y9 396 aa12.85□□□□□ -0.35
HPS4-212ENST00000481910 SESTD1Q86VW0 696 aa12.85□□□□□ -0.35
HPS4-212ENST00000481910 GPBP1Q86WP2 473 aa12.85□□□□□ -0.35
HPS4-212ENST00000481910 PAGE5Q96GU1 130 aa12.85□□□□□ -0.35
HPS4-212ENST00000481910 RUSC1Q9BVN2 902 aa12.85□□□□□ -0.35
HPS4-212ENST00000481910 LRRC27Q9C0I9 530 aa12.85□□□□□ -0.35
HPS4-212ENST00000481910 C11orf49Q9H6J7 331 aa12.85□□□□□ -0.35
HPS4-212ENST00000481910 SUGCTQ9HAC7 445 aa12.85□□□□□ -0.35
HPS4-212ENST00000481910 KCND2Q9NZV8 630 aa12.85□□□□□ -0.35
HPS4-212ENST00000481910 TUBE1Q9UJT0 475 aa12.85□□□□□ -0.35
HPS4-212ENST00000481910 ARID2Q68CP9 1835 aa12.85□□□□□ -0.35
HPS4-212ENST00000481910 EVPLQ92817 2033 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms