RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 TMX1Q9H3N1 280 aa10.8□□□□□ -0.68
SMARCE1-210ENST00000481231 PSTPIP2Q9H939 334 aa10.8□□□□□ -0.68
SMARCE1-210ENST00000481231 TYW1Q9NV66 732 aaKnown RBP10.8□□□□□ -0.68
SMARCE1-210ENST00000481231 PKD2L1Q9P0L9 805 aa10.8□□□□□ -0.68
SMARCE1-210ENST00000481231 PADI3Q9ULW8 664 aa10.8□□□□□ -0.68
SMARCE1-210ENST00000481231 DUSP12Q9UNI6 340 aa10.8□□□□□ -0.68
SMARCE1-210ENST00000481231 RBM8AQ9Y5S9 174 aaKnown RBP10.8□□□□□ -0.68
SMARCE1-210ENST00000481231 MYO10Q9HD67 2058 aa10.8□□□□□ -0.68
SMARCE1-210ENST00000481231 PKD1L2Q7Z442 2459 aa10.79□□□□□ -0.68
SMARCE1-210ENST00000481231 hCG_1642624A0A1W2PR95 340 aa10.79□□□□□ -0.68
SMARCE1-210ENST00000481231 MBLAC1A4D2B0 266 aaPredicted RBP10.79□□□□□ -0.68
SMARCE1-210ENST00000481231 KRBA1A5PL33 1030 aa10.79□□□□□ -0.68
SMARCE1-210ENST00000481231 SH2B2O14492 632 aaPredicted RBP10.79□□□□□ -0.68
SMARCE1-210ENST00000481231 EOMESO95936 686 aa10.79□□□□□ -0.68
SMARCE1-210ENST00000481231 DCNP07585 359 aaKnown RBP10.79□□□□□ -0.68
SMARCE1-210ENST00000481231 CFHP08603 1231 aa10.79□□□□□ -0.68
SMARCE1-210ENST00000481231 RXRAP19793 462 aa10.79□□□□□ -0.68
SMARCE1-210ENST00000481231 GNAQP50148 359 aa10.79□□□□□ -0.68
SMARCE1-210ENST00000481231 PAK2Q13177 524 aa10.79□□□□□ -0.68
SMARCE1-210ENST00000481231 TDGQ13569 410 aa10.79□□□□□ -0.68
SMARCE1-210ENST00000481231 UBE2SQ16763 222 aa10.79□□□□□ -0.68
SMARCE1-210ENST00000481231 TMEM266Q2M3C6 531 aa10.79□□□□□ -0.68
SMARCE1-210ENST00000481231 MARCH8Q5T0T0 291 aa10.79□□□□□ -0.68
SMARCE1-210ENST00000481231 CASC1Q6TDU7 716 aa10.79□□□□□ -0.68
SMARCE1-210ENST00000481231 NFXL1Q6ZNB6 911 aa10.79□□□□□ -0.68
SMARCE1-210ENST00000481231 GLG1Q92896 1179 aa10.79□□□□□ -0.68
SMARCE1-210ENST00000481231 CYP26B1Q9NR63 512 aa10.79□□□□□ -0.68
SMARCE1-210ENST00000481231 ERAP1Q9NZ08 941 aa10.79□□□□□ -0.68
SMARCE1-210ENST00000481231 CDV3Q9UKY7 258 aaKnown RBP10.79□□□□□ -0.68
SMARCE1-210ENST00000481231 MGEA5O60502 916 aa10.78□□□□□ -0.68
SMARCE1-210ENST00000481231 ADRB1P08588 477 aa10.78□□□□□ -0.68
SMARCE1-210ENST00000481231 FGFR1P11362 822 aa10.78□□□□□ -0.68
SMARCE1-210ENST00000481231 RFX1P22670 979 aa10.78□□□□□ -0.68
SMARCE1-210ENST00000481231 MCM5P33992 734 aa10.78□□□□□ -0.68
SMARCE1-210ENST00000481231 CA8P35219 290 aa10.78□□□□□ -0.68
SMARCE1-210ENST00000481231 SARSP49591 514 aaKnown RBP10.78□□□□□ -0.68
SMARCE1-210ENST00000481231 IGBP1P78318 339 aa10.78□□□□□ -0.68
SMARCE1-210ENST00000481231 MTMR1Q13613 665 aa10.78□□□□□ -0.68
SMARCE1-210ENST00000481231 KIAA1841Q6NSI8 718 aa10.78□□□□□ -0.68
SMARCE1-210ENST00000481231 TMC7Q7Z402 723 aa10.78□□□□□ -0.68
SMARCE1-210ENST00000481231 RAB11FIP4Q86YS3 637 aa10.78□□□□□ -0.68
SMARCE1-210ENST00000481231 PLCD3Q8N3E9 789 aa10.78□□□□□ -0.68
SMARCE1-210ENST00000481231 SEPT1Q8WYJ6 367 aa10.78□□□□□ -0.68
SMARCE1-210ENST00000481231 MTA3Q9BTC8 594 aa10.78□□□□□ -0.68
SMARCE1-210ENST00000481231 CWH43Q9H720 699 aa10.78□□□□□ -0.68
SMARCE1-210ENST00000481231 NGRNQ9NPE2 291 aaKnown RBP10.78□□□□□ -0.68
SMARCE1-210ENST00000481231 NCDNQ9UBB6 729 aa10.78□□□□□ -0.68
SMARCE1-210ENST00000481231 CA14Q9ULX7 337 aa10.78□□□□□ -0.68
SMARCE1-210ENST00000481231 LZTS1Q9Y250 596 aa10.78□□□□□ -0.68
SMARCE1-210ENST00000481231 USTQ9Y2C2 406 aa10.78□□□□□ -0.68
SMARCE1-210ENST00000481231 PCDHB7Q9Y5E2 793 aa10.78□□□□□ -0.68
SMARCE1-210ENST00000481231 UBIAD1Q9Y5Z9 338 aa10.78□□□□□ -0.68
SMARCE1-210ENST00000481231 POTEMA6NI47 508 aa10.77□□□□□ -0.69
SMARCE1-210ENST00000481231 CCDC69A6NI79 296 aa10.77□□□□□ -0.69
SMARCE1-210ENST00000481231 SPDYE3A6NKU9 549 aa10.77□□□□□ -0.69
SMARCE1-210ENST00000481231 CLASP2O75122 1294 aaKnown RBP10.77□□□□□ -0.69
SMARCE1-210ENST00000481231 INSRRP14616 1297 aa10.77□□□□□ -0.69
SMARCE1-210ENST00000481231 LAG3P18627 525 aa10.77□□□□□ -0.69
SMARCE1-210ENST00000481231 PLCB3Q01970 1234 aa10.77□□□□□ -0.69
SMARCE1-210ENST00000481231 POTEGQ6S5H5 508 aa10.77□□□□□ -0.69
SMARCE1-210ENST00000481231 TMTC3Q6ZXV5 915 aa10.77□□□□□ -0.69
SMARCE1-210ENST00000481231 HEATR3Q7Z4Q2 680 aa10.77□□□□□ -0.69
SMARCE1-210ENST00000481231 TMTC2Q8N394 836 aa10.77□□□□□ -0.69
SMARCE1-210ENST00000481231 CCDC82Q8N4S0 544 aa10.77□□□□□ -0.69
SMARCE1-210ENST00000481231 RSAD2Q8WXG1 361 aa10.77□□□□□ -0.69
SMARCE1-210ENST00000481231 TMEM87BQ96K49 555 aa10.77□□□□□ -0.69
SMARCE1-210ENST00000481231 PCYT2Q99447 389 aa10.77□□□□□ -0.69
SMARCE1-210ENST00000481231 LSG1Q9H089 658 aaKnown RBP10.77□□□□□ -0.69
SMARCE1-210ENST00000481231 SMARCAD1Q9H4L7 1026 aa10.77□□□□□ -0.69
SMARCE1-210ENST00000481231 TBC1D17Q9HA65 648 aa10.77□□□□□ -0.69
SMARCE1-210ENST00000481231 KCNK12Q9HB15 430 aa10.77□□□□□ -0.69
SMARCE1-210ENST00000481231 JPH1Q9HDC5 661 aaPredicted RBP10.77□□□□□ -0.69
SMARCE1-210ENST00000481231 JADE2Q9NQC1 790 aa10.77□□□□□ -0.69
SMARCE1-210ENST00000481231 RNF216Q9NWF9 866 aaPredicted RBP10.77□□□□□ -0.69
SMARCE1-210ENST00000481231 PUF60Q9UHX1 559 aaKnown RBP10.77□□□□□ -0.69
SMARCE1-210ENST00000481231 TRPV2Q9Y5S1 764 aa10.77□□□□□ -0.69
SMARCE1-210ENST00000481231 IGSF9BQ9UPX0 1349 aa10.77□□□□□ -0.69
SMARCE1-210ENST00000481231 DOCK5Q9H7D0 1870 aa10.76□□□□□ -0.69
SMARCE1-210ENST00000481231 C2orf71A6NGG8 1288 aa10.76□□□□□ -0.69
SMARCE1-210ENST00000481231 RRN3P2A6NIE6 340 aa10.76□□□□□ -0.69
SMARCE1-210ENST00000481231 SLC27A2O14975 620 aa10.76□□□□□ -0.69
SMARCE1-210ENST00000481231 KINO60870 393 aaKnown RBP10.76□□□□□ -0.69
SMARCE1-210ENST00000481231 CALM1P0DP23 149 aa10.76□□□□□ -0.69
SMARCE1-210ENST00000481231 CALM2P0DP24 149 aa10.76□□□□□ -0.69
SMARCE1-210ENST00000481231 CALM3P0DP25 149 aa10.76□□□□□ -0.69
SMARCE1-210ENST00000481231 EPCAMP16422 314 aa10.76□□□□□ -0.69
SMARCE1-210ENST00000481231 LIFRP42702 1097 aa10.76□□□□□ -0.69
SMARCE1-210ENST00000481231 NFX1Q12986 1120 aaKnown RBP10.76□□□□□ -0.69
SMARCE1-210ENST00000481231 ACAP1Q15027 740 aa10.76□□□□□ -0.69
SMARCE1-210ENST00000481231 ATAT1Q5SQI0 421 aa10.76□□□□□ -0.69
SMARCE1-210ENST00000481231 VARS2Q5ST30 1063 aaKnown RBP10.76□□□□□ -0.69
SMARCE1-210ENST00000481231 TMC5Q6UXY8 1006 aa10.76□□□□□ -0.69
SMARCE1-210ENST00000481231 C1orf210Q8IVY1 113 aa10.76□□□□□ -0.69
SMARCE1-210ENST00000481231 LRRC2Q9BYS8 371 aa10.76□□□□□ -0.69
SMARCE1-210ENST00000481231 PCDHA6Q9UN73 950 aa10.76□□□□□ -0.69
SMARCE1-210ENST00000481231 PCDHA8Q9Y5H6 950 aa10.76□□□□□ -0.69
SMARCE1-210ENST00000481231 SLC12A7Q9Y666 1083 aa10.76□□□□□ -0.69
SMARCE1-210ENST00000481231 M0QZ92 97 aa10.75□□□□□ -0.69
SMARCE1-210ENST00000481231 MAFGO15525 162 aa10.75□□□□□ -0.69
SMARCE1-210ENST00000481231 RPLP2P05387 115 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms