RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 CRYBB1P53674 252 aaPredicted RBP17.22■□□□□ 0.35
LIMS3-203ENST00000480744 PRKCEQ02156 737 aa17.22■□□□□ 0.35
LIMS3-203ENST00000480744 LRCH2Q5VUJ6 765 aa17.22■□□□□ 0.35
LIMS3-203ENST00000480744 EFCAB12Q6NXP0 572 aa17.22■□□□□ 0.35
LIMS3-203ENST00000480744 CPLX2Q6PUV4 134 aaKnown RBP17.22■□□□□ 0.35
LIMS3-203ENST00000480744 FAM228AQ86W67 206 aa17.22■□□□□ 0.35
LIMS3-203ENST00000480744 LRRC71Q8N4P6 559 aa17.22■□□□□ 0.35
LIMS3-203ENST00000480744 KLHL23Q8NBE8 558 aa17.22■□□□□ 0.35
LIMS3-203ENST00000480744 P2RX5Q93086 422 aa17.22■□□□□ 0.35
LIMS3-203ENST00000480744 MAP7D2Q96T17 732 aa17.22■□□□□ 0.35
LIMS3-203ENST00000480744 C1orf112Q9NSG2 853 aa17.22■□□□□ 0.35
LIMS3-203ENST00000480744 PCDHA4Q9UN74 947 aa17.22■□□□□ 0.35
LIMS3-203ENST00000480744 FAM50BQ9Y247 325 aa17.22■□□□□ 0.35
LIMS3-203ENST00000480744 EPB41L2O43491 1005 aaKnown RBP17.21■□□□□ 0.35
LIMS3-203ENST00000480744 EDIL3O43854 480 aa17.21■□□□□ 0.35
LIMS3-203ENST00000480744 DEXIO95424 95 aa17.21■□□□□ 0.35
LIMS3-203ENST00000480744 TMOD1P28289 359 aa17.21■□□□□ 0.35
LIMS3-203ENST00000480744 GTF2F1P35269 517 aaKnown RBP eCLIP17.21■□□□□ 0.35
LIMS3-203ENST00000480744 UGCGQ16739 394 aa17.21■□□□□ 0.35
LIMS3-203ENST00000480744 SLC24A5Q71RS6 500 aa17.21■□□□□ 0.35
LIMS3-203ENST00000480744 SLC5A5Q92911 643 aa17.21■□□□□ 0.35
LIMS3-203ENST00000480744 ZNF274Q96GC6 653 aaPredicted RBP17.21■□□□□ 0.35
LIMS3-203ENST00000480744 ZNF668Q96K58 619 aaPredicted RBP17.21■□□□□ 0.35
LIMS3-203ENST00000480744 SCLT1Q96NL6 688 aa17.21■□□□□ 0.35
LIMS3-203ENST00000480744 AIFM3Q96NN9 605 aa17.21■□□□□ 0.35
LIMS3-203ENST00000480744 RIT2Q99578 217 aa17.21■□□□□ 0.35
LIMS3-203ENST00000480744 C22orf23Q9BZE7 217 aa17.21■□□□□ 0.35
LIMS3-203ENST00000480744 UNC45AQ9H3U1 944 aa17.21■□□□□ 0.35
LIMS3-203ENST00000480744 RGS18Q9NS28 235 aa17.21■□□□□ 0.35
LIMS3-203ENST00000480744 NRBP2Q9NSY0 501 aa17.21■□□□□ 0.35
LIMS3-203ENST00000480744 PDRG1Q9NUG6 133 aa17.21■□□□□ 0.35
LIMS3-203ENST00000480744 RNF216Q9NWF9 866 aaPredicted RBP17.21■□□□□ 0.35
LIMS3-203ENST00000480744 FAM86C2PA6NEL3 165 aa17.2■□□□□ 0.34
LIMS3-203ENST00000480744 ZNF862O60290 1169 aa17.2■□□□□ 0.34
LIMS3-203ENST00000480744 GPR32O75388 356 aa17.2■□□□□ 0.34
LIMS3-203ENST00000480744 TDP2O95551 362 aa17.2■□□□□ 0.34
LIMS3-203ENST00000480744 DNAJB1P25685 340 aa17.2■□□□□ 0.34
LIMS3-203ENST00000480744 SFNP31947 248 aa17.2■□□□□ 0.34
LIMS3-203ENST00000480744 LTBRP36941 435 aa17.2■□□□□ 0.34
LIMS3-203ENST00000480744 JAK3P52333 1124 aa17.2■□□□□ 0.34
LIMS3-203ENST00000480744 NLRP11P59045 1033 aaKnown RBP17.2■□□□□ 0.34
LIMS3-203ENST00000480744 CAMK1Q14012 370 aa17.2■□□□□ 0.34
LIMS3-203ENST00000480744 COL19A1Q14993 1142 aa17.2■□□□□ 0.34
LIMS3-203ENST00000480744 NAALADL2Q58DX5 795 aa17.2■□□□□ 0.34
LIMS3-203ENST00000480744 TMEM31Q5JXX7 168 aa17.2■□□□□ 0.34
LIMS3-203ENST00000480744 FAM102BQ5T8I3 360 aa17.2■□□□□ 0.34
LIMS3-203ENST00000480744 MIER3Q7Z3K6 550 aa17.2■□□□□ 0.34
LIMS3-203ENST00000480744 BLIDQ8IZY5 108 aa17.2■□□□□ 0.34
LIMS3-203ENST00000480744 SPPL3Q8TCT6 385 aa17.2■□□□□ 0.34
LIMS3-203ENST00000480744 POF1BQ8WVV4 589 aa17.2■□□□□ 0.34
LIMS3-203ENST00000480744 PPP2R3CQ969Q6 453 aa17.2■□□□□ 0.34
LIMS3-203ENST00000480744 LRFN3Q9BTN0 628 aa17.2■□□□□ 0.34
LIMS3-203ENST00000480744 TM6SF1Q9BZW5 370 aa17.2■□□□□ 0.34
LIMS3-203ENST00000480744 ATP6V0A4Q9HBG4 840 aa17.2■□□□□ 0.34
LIMS3-203ENST00000480744 PPP4R2Q9NY27 417 aa17.2■□□□□ 0.34
LIMS3-203ENST00000480744 C9IYK1 514 aa17.19■□□□□ 0.34
LIMS3-203ENST00000480744 LINC01565O15544 149 aa17.19■□□□□ 0.34
LIMS3-203ENST00000480744 FGFR1P11362 822 aa17.19■□□□□ 0.34
LIMS3-203ENST00000480744 IRS1P35568 1242 aa17.19■□□□□ 0.34
LIMS3-203ENST00000480744 DLX2Q07687 328 aaPredicted RBP17.19■□□□□ 0.34
LIMS3-203ENST00000480744 ERICH6BQ5W0A0 696 aa17.19■□□□□ 0.34
LIMS3-203ENST00000480744 FAM43BQ6ZT52 329 aaPredicted RBP17.19■□□□□ 0.34
LIMS3-203ENST00000480744 AAASQ9NRG9 546 aa17.19■□□□□ 0.34
LIMS3-203ENST00000480744 HCSTQ9UBK5 93 aa17.19■□□□□ 0.34
LIMS3-203ENST00000480744 SEPT9Q9UHD8 586 aaPredicted RBP17.19■□□□□ 0.34
LIMS3-203ENST00000480744 PCDHB12Q9Y5F1 795 aa17.19■□□□□ 0.34
LIMS3-203ENST00000480744 NDUFV1P49821 464 aa17.18■□□□□ 0.34
LIMS3-203ENST00000480744 TBC1D8BQ0IIM8 1120 aa17.18■□□□□ 0.34
LIMS3-203ENST00000480744 NONOQ15233 471 aaKnown RBP eCLIP17.18■□□□□ 0.34
LIMS3-203ENST00000480744 CTC1Q2NKJ3 1217 aa17.18■□□□□ 0.34
LIMS3-203ENST00000480744 MTERF2Q49AM1 385 aa17.18■□□□□ 0.34
LIMS3-203ENST00000480744 Q4G0T1 1027 aa17.18■□□□□ 0.34
LIMS3-203ENST00000480744 ADGRD2Q7Z7M1 963 aa17.18■□□□□ 0.34
LIMS3-203ENST00000480744 LINC01465Q8N7H1 131 aa17.18■□□□□ 0.34
LIMS3-203ENST00000480744 TMEM161AQ9NX61 479 aa17.18■□□□□ 0.34
LIMS3-203ENST00000480744 KCNJ14Q9UNX9 436 aa17.18■□□□□ 0.34
LIMS3-203ENST00000480744 PCDHGC5Q9Y5F6 944 aa17.18■□□□□ 0.34
LIMS3-203ENST00000480744 PI4K2BG5E9Z4 385 aa17.17■□□□□ 0.34
LIMS3-203ENST00000480744 TBX10O75333 385 aa17.17■□□□□ 0.34
LIMS3-203ENST00000480744 PSMD10O75832 226 aa17.17■□□□□ 0.34
LIMS3-203ENST00000480744 ZSCAN20P17040 1043 aaPredicted RBP17.17■□□□□ 0.34
LIMS3-203ENST00000480744 NRIP1P48552 1158 aa17.17■□□□□ 0.34
LIMS3-203ENST00000480744 DSC3Q14574 896 aa17.17■□□□□ 0.34
LIMS3-203ENST00000480744 INF2Q27J81 1249 aa17.17■□□□□ 0.34
LIMS3-203ENST00000480744 RBM23Q86U06 439 aaKnown RBP17.17■□□□□ 0.34
LIMS3-203ENST00000480744 THNSL1Q8IYQ7 743 aa17.17■□□□□ 0.34
LIMS3-203ENST00000480744 DAGLBQ8NCG7 672 aa17.17■□□□□ 0.34
LIMS3-203ENST00000480744 RNF169Q8NCN4 708 aa17.17■□□□□ 0.34
LIMS3-203ENST00000480744 MICAL1Q8TDZ2 1067 aa17.17■□□□□ 0.34
LIMS3-203ENST00000480744 NLRP7Q8WX94 980 aa17.17■□□□□ 0.34
LIMS3-203ENST00000480744 ADAMTS10Q9H324 1103 aa17.17■□□□□ 0.34
LIMS3-203ENST00000480744 TYW1Q9NV66 732 aaKnown RBP17.17■□□□□ 0.34
LIMS3-203ENST00000480744 TMEM150BA6NC51 233 aa17.16■□□□□ 0.34
LIMS3-203ENST00000480744 M0R2N6 131 aa17.16■□□□□ 0.34
LIMS3-203ENST00000480744 DTNBO60941 627 aa17.16■□□□□ 0.34
LIMS3-203ENST00000480744 CDKL5O76039 1030 aa17.16■□□□□ 0.34
LIMS3-203ENST00000480744 FGFR4P22455 802 aa17.16■□□□□ 0.34
LIMS3-203ENST00000480744 EIF4BP23588 611 aaKnown RBP17.16■□□□□ 0.34
LIMS3-203ENST00000480744 GPC3P51654 580 aa17.16■□□□□ 0.34
LIMS3-203ENST00000480744 ADAM15Q13444 863 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms