RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 NRIP1P48552 1158 aa11.82□□□□□ -0.52
SMURF1-204ENST00000480055 GNAQP50148 359 aa11.82□□□□□ -0.52
SMURF1-204ENST00000480055 VCPP55072 806 aaKnown RBP11.82□□□□□ -0.52
SMURF1-204ENST00000480055 MMRN1Q13201 1228 aa11.82□□□□□ -0.52
SMURF1-204ENST00000480055 CCDC82Q8N4S0 544 aa11.82□□□□□ -0.52
SMURF1-204ENST00000480055 KLHL23Q8NBE8 558 aa11.82□□□□□ -0.52
SMURF1-204ENST00000480055 IGDCC4Q8TDY8 1250 aa11.82□□□□□ -0.52
SMURF1-204ENST00000480055 ZBTB10Q96DT7 871 aa11.82□□□□□ -0.52
SMURF1-204ENST00000480055 MAP3K14Q99558 947 aa11.82□□□□□ -0.52
SMURF1-204ENST00000480055 PHF7Q9BWX1 381 aaPredicted RBP11.82□□□□□ -0.52
SMURF1-204ENST00000480055 FTHL17Q9BXU8 183 aa11.82□□□□□ -0.52
SMURF1-204ENST00000480055 FAM86C1Q9NVL1 165 aa11.82□□□□□ -0.52
SMURF1-204ENST00000480055 DAXXQ9UER7 740 aaPredicted RBP11.82□□□□□ -0.52
SMURF1-204ENST00000480055 TAF6LQ9Y6J9 622 aa11.82□□□□□ -0.52
SMURF1-204ENST00000480055 MYO15AQ9UKN7 3530 aa11.82□□□□□ -0.52
SMURF1-204ENST00000480055 PTPRZ1P23471 2315 aaPredicted RBP11.81□□□□□ -0.52
SMURF1-204ENST00000480055 PPFIA3O75145 1194 aa11.81□□□□□ -0.52
SMURF1-204ENST00000480055 PLEKHA8P1O95397 391 aa11.81□□□□□ -0.52
SMURF1-204ENST00000480055 RPLP2P05387 115 aaKnown RBP11.81□□□□□ -0.52
SMURF1-204ENST00000480055 INSRRP14616 1297 aa11.81□□□□□ -0.52
SMURF1-204ENST00000480055 ATF7P17544 494 aaPredicted RBP11.81□□□□□ -0.52
SMURF1-204ENST00000480055 ITGB5P18084 799 aa11.81□□□□□ -0.52
SMURF1-204ENST00000480055 SMARCA1P28370 1054 aa11.81□□□□□ -0.52
SMURF1-204ENST00000480055 CLCN1P35523 988 aa11.81□□□□□ -0.52
SMURF1-204ENST00000480055 ANTXR2P58335 489 aa11.81□□□□□ -0.52
SMURF1-204ENST00000480055 PAK2Q13177 524 aa11.81□□□□□ -0.52
SMURF1-204ENST00000480055 UBE2SQ16763 222 aa11.81□□□□□ -0.52
SMURF1-204ENST00000480055 MARCH8Q5T0T0 291 aa11.81□□□□□ -0.52
SMURF1-204ENST00000480055 SPOUT1Q5T280 376 aaKnown RBP11.81□□□□□ -0.52
SMURF1-204ENST00000480055 RBM23Q86U06 439 aaKnown RBP11.81□□□□□ -0.52
SMURF1-204ENST00000480055 NPAS4Q8IUM7 802 aa11.81□□□□□ -0.52
SMURF1-204ENST00000480055 MICAL1Q8TDZ2 1067 aa11.81□□□□□ -0.52
SMURF1-204ENST00000480055 POF1BQ8WVV4 589 aa11.81□□□□□ -0.52
SMURF1-204ENST00000480055 SUSD6Q92537 303 aa11.81□□□□□ -0.52
SMURF1-204ENST00000480055 IRF2BPLQ9H1B7 796 aa11.81□□□□□ -0.52
SMURF1-204ENST00000480055 AGO3Q9H9G7 860 aaKnown RBP11.81□□□□□ -0.52
SMURF1-204ENST00000480055 LY9Q9HBG7 655 aa11.81□□□□□ -0.52
SMURF1-204ENST00000480055 JPH1Q9HDC5 661 aaPredicted RBP11.81□□□□□ -0.52
SMURF1-204ENST00000480055 hCG_1642624A0A1W2PR95 340 aa11.8□□□□□ -0.52
SMURF1-204ENST00000480055 MAFGO15525 162 aa11.8□□□□□ -0.52
SMURF1-204ENST00000480055 PRC1O43663 620 aa11.8□□□□□ -0.52
SMURF1-204ENST00000480055 CALM1P0DP23 149 aa11.8□□□□□ -0.52
SMURF1-204ENST00000480055 CALM2P0DP24 149 aa11.8□□□□□ -0.52
SMURF1-204ENST00000480055 CALM3P0DP25 149 aa11.8□□□□□ -0.52
SMURF1-204ENST00000480055 SCG2P13521 617 aa11.8□□□□□ -0.52
SMURF1-204ENST00000480055 RXRAP19793 462 aa11.8□□□□□ -0.52
SMURF1-204ENST00000480055 THSD4Q6ZMP0 1018 aa11.8□□□□□ -0.52
SMURF1-204ENST00000480055 HEATR3Q7Z4Q2 680 aa11.8□□□□□ -0.52
SMURF1-204ENST00000480055 RTN4RL1Q86UN2 441 aaPredicted RBP11.8□□□□□ -0.52
SMURF1-204ENST00000480055 RAB11FIP4Q86YS3 637 aa11.8□□□□□ -0.52
SMURF1-204ENST00000480055 MB21D2Q8IYB1 491 aaPredicted RBP11.8□□□□□ -0.52
SMURF1-204ENST00000480055 TMTC2Q8N394 836 aa11.8□□□□□ -0.52
SMURF1-204ENST00000480055 SRBD1Q8N5C6 995 aaKnown RBP11.8□□□□□ -0.52
SMURF1-204ENST00000480055 ATP8B4Q8TF62 1192 aa11.8□□□□□ -0.52
SMURF1-204ENST00000480055 TRAPPC12Q8WVT3 735 aa11.8□□□□□ -0.52
SMURF1-204ENST00000480055 SDF4Q9BRK5 362 aa11.8□□□□□ -0.52
SMURF1-204ENST00000480055 JADE2Q9NQC1 790 aa11.8□□□□□ -0.52
SMURF1-204ENST00000480055 SLC9A2Q9UBY0 812 aa11.8□□□□□ -0.52
SMURF1-204ENST00000480055 PADI3Q9ULW8 664 aa11.8□□□□□ -0.52
SMURF1-204ENST00000480055 PCDHA6Q9UN73 950 aa11.8□□□□□ -0.52
SMURF1-204ENST00000480055 GINS2Q9Y248 185 aa11.8□□□□□ -0.52
SMURF1-204ENST00000480055 PCDHGC5Q9Y5F6 944 aa11.8□□□□□ -0.52
SMURF1-204ENST00000480055 PCDHA8Q9Y5H6 950 aa11.8□□□□□ -0.52
SMURF1-204ENST00000480055 TRPV2Q9Y5S1 764 aa11.8□□□□□ -0.52
SMURF1-204ENST00000480055 UBIAD1Q9Y5Z9 338 aa11.8□□□□□ -0.52
SMURF1-204ENST00000480055 SQORQ9Y6N5 450 aa11.8□□□□□ -0.52
SMURF1-204ENST00000480055 FSD2A1L4K1 749 aa11.79□□□□□ -0.52
SMURF1-204ENST00000480055 SGSM2O43147 1006 aa11.79□□□□□ -0.52
SMURF1-204ENST00000480055 AVPR2P30518 371 aa11.79□□□□□ -0.52
SMURF1-204ENST00000480055 MCM5P33992 734 aa11.79□□□□□ -0.52
SMURF1-204ENST00000480055 FOXK2Q01167 660 aa11.79□□□□□ -0.52
SMURF1-204ENST00000480055 NFX1Q12986 1120 aaKnown RBP11.79□□□□□ -0.52
SMURF1-204ENST00000480055 PTPN21Q16825 1174 aa11.79□□□□□ -0.52
SMURF1-204ENST00000480055 VN1R2Q8NFZ6 395 aa11.79□□□□□ -0.52
SMURF1-204ENST00000480055 RPGRIP1Q96KN7 1286 aa11.79□□□□□ -0.52
SMURF1-204ENST00000480055 CELF4Q9BZC1 486 aaKnown RBP11.79□□□□□ -0.52
SMURF1-204ENST00000480055 PCDHB7Q9Y5E2 793 aa11.79□□□□□ -0.52
SMURF1-204ENST00000480055 RBM8AQ9Y5S9 174 aaKnown RBP11.79□□□□□ -0.52
SMURF1-204ENST00000480055 SLC12A7Q9Y666 1083 aa11.79□□□□□ -0.52
SMURF1-204ENST00000480055 IGSF9BQ9UPX0 1349 aa11.79□□□□□ -0.52
SMURF1-204ENST00000480055 C2orf16Q68DN1 1984 aa11.78□□□□□ -0.52
SMURF1-204ENST00000480055 DENND3A2RUS2 1198 aa11.78□□□□□ -0.52
SMURF1-204ENST00000480055 PROB1E7EW31 1015 aa11.78□□□□□ -0.52
SMURF1-204ENST00000480055 GATMP50440 423 aa11.78□□□□□ -0.52
SMURF1-204ENST00000480055 STAT5BP51692 787 aa11.78□□□□□ -0.52
SMURF1-204ENST00000480055 RBM10P98175 930 aaKnown RBP11.78□□□□□ -0.52
SMURF1-204ENST00000480055 KRT76Q01546 638 aa11.78□□□□□ -0.52
SMURF1-204ENST00000480055 UBE3AQ05086 875 aa11.78□□□□□ -0.52
SMURF1-204ENST00000480055 PLCB4Q15147 1175 aa11.78□□□□□ -0.52
SMURF1-204ENST00000480055 AMHR2Q16671 573 aa11.78□□□□□ -0.52
SMURF1-204ENST00000480055 DUSP6Q16828 381 aa11.78□□□□□ -0.52
SMURF1-204ENST00000480055 TMEM266Q2M3C6 531 aa11.78□□□□□ -0.52
SMURF1-204ENST00000480055 SYNE3Q6ZMZ3 975 aa11.78□□□□□ -0.52
SMURF1-204ENST00000480055 NME8Q8N427 588 aa11.78□□□□□ -0.52
SMURF1-204ENST00000480055 ATOH1Q92858 354 aaPredicted RBP11.78□□□□□ -0.52
SMURF1-204ENST00000480055 MAP4K1Q92918 833 aa11.78□□□□□ -0.52
SMURF1-204ENST00000480055 CDCA3Q99618 268 aaPredicted RBP11.78□□□□□ -0.52
SMURF1-204ENST00000480055 TLE6Q9H808 572 aa11.78□□□□□ -0.52
SMURF1-204ENST00000480055 AAASQ9NRG9 546 aa11.78□□□□□ -0.52
SMURF1-204ENST00000480055 KCNH7Q9NS40 1196 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms