RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 SGIP1Q9BQI5 828 aa14.26□□□□□ -0.13
SEC13-216ENST00000479868 SH2D3AQ9BRG2 576 aa14.26□□□□□ -0.13
SEC13-216ENST00000479868 PDCD2LQ9BRP1 358 aa14.26□□□□□ -0.13
SEC13-216ENST00000479868 ARFGAP3Q9NP61 516 aa14.26□□□□□ -0.13
SEC13-216ENST00000479868 RAB21Q9UL25 225 aa14.26□□□□□ -0.13
SEC13-216ENST00000479868 JRKLQ9Y4A0 524 aa14.26□□□□□ -0.13
SEC13-216ENST00000479868 A0A087X0T9 212 aa14.25□□□□□ -0.13
SEC13-216ENST00000479868 PPP1R37O75864 691 aa14.25□□□□□ -0.13
SEC13-216ENST00000479868 FAM228BP0C875 321 aa14.25□□□□□ -0.13
SEC13-216ENST00000479868 PSMC2P35998 433 aaKnown RBP14.25□□□□□ -0.13
SEC13-216ENST00000479868 TUBB4BP68371 445 aa14.25□□□□□ -0.13
SEC13-216ENST00000479868 R3HDM1Q15032 1099 aaKnown RBP14.25□□□□□ -0.13
SEC13-216ENST00000479868 ASIC2Q16515 512 aa14.25□□□□□ -0.13
SEC13-216ENST00000479868 SLC18A3Q16572 532 aa14.25□□□□□ -0.13
SEC13-216ENST00000479868 ZNF280CQ8ND82 737 aa14.25□□□□□ -0.13
SEC13-216ENST00000479868 STRA6Q9BX79 667 aa14.25□□□□□ -0.13
SEC13-216ENST00000479868 GBP3Q9H0R5 595 aa14.25□□□□□ -0.13
SEC13-216ENST00000479868 SIX2Q9NPC8 291 aa14.25□□□□□ -0.13
SEC13-216ENST00000479868 PXMP2Q9NR77 195 aa14.25□□□□□ -0.13
SEC13-216ENST00000479868 AGPAT3Q9NRZ7 376 aa14.25□□□□□ -0.13
SEC13-216ENST00000479868 GCNT4Q9P109 453 aa14.25□□□□□ -0.13
SEC13-216ENST00000479868 ADAMTS1Q9UHI8 967 aa14.25□□□□□ -0.13
SEC13-216ENST00000479868 AJAP1Q9UKB5 411 aaPredicted RBP14.25□□□□□ -0.13
SEC13-216ENST00000479868 UBE4BO95155 1302 aa14.25□□□□□ -0.13
SEC13-216ENST00000479868 TMEM150BA6NC51 233 aa14.25□□□□□ -0.13
SEC13-216ENST00000479868 PDE2AO00408 941 aaPredicted RBP14.25□□□□□ -0.13
SEC13-216ENST00000479868 QARSP47897 775 aaKnown RBP14.25□□□□□ -0.13
SEC13-216ENST00000479868 RARRES1P49788 294 aa14.25□□□□□ -0.13
SEC13-216ENST00000479868 HMGCS2P54868 508 aa14.25□□□□□ -0.13
SEC13-216ENST00000479868 PLS1Q14651 629 aa14.25□□□□□ -0.13
SEC13-216ENST00000479868 BRD3Q15059 726 aa14.25□□□□□ -0.13
SEC13-216ENST00000479868 UGCGQ16739 394 aa14.25□□□□□ -0.13
SEC13-216ENST00000479868 GBP6Q6ZN66 633 aa14.25□□□□□ -0.13
SEC13-216ENST00000479868 IRF2BP2Q7Z5L9 587 aa14.25□□□□□ -0.13
SEC13-216ENST00000479868 RBM46Q8TBY0 533 aaKnown RBP14.25□□□□□ -0.13
SEC13-216ENST00000479868 TRPM4Q8TD43 1214 aa14.25□□□□□ -0.13
SEC13-216ENST00000479868 SPAG5Q96R06 1193 aa14.25□□□□□ -0.13
SEC13-216ENST00000479868 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.25□□□□□ -0.13
SEC13-216ENST00000479868 ST7Q9NRC1 585 aa14.25□□□□□ -0.13
SEC13-216ENST00000479868 CD2APQ9Y5K6 639 aa14.25□□□□□ -0.13
SEC13-216ENST00000479868 PHIPQ8WWQ0 1821 aa14.24□□□□□ -0.13
SEC13-216ENST00000479868 A0A0U1RQG5 324 aaPredicted RBP14.24□□□□□ -0.13
SEC13-216ENST00000479868 POTEB2H3BUK9 544 aa14.24□□□□□ -0.13
SEC13-216ENST00000479868 BUB1O43683 1085 aa14.24□□□□□ -0.13
SEC13-216ENST00000479868 PLA2G4AP47712 749 aa14.24□□□□□ -0.13
SEC13-216ENST00000479868 CYP2J2P51589 502 aa14.24□□□□□ -0.13
SEC13-216ENST00000479868 BAATQ14032 418 aaPredicted RBP14.24□□□□□ -0.13
SEC13-216ENST00000479868 STXBP4Q6ZWJ1 553 aa14.24□□□□□ -0.13
SEC13-216ENST00000479868 HS2ST1Q7LGA3 356 aa14.24□□□□□ -0.13
SEC13-216ENST00000479868 TRMT1LQ7Z2T5 733 aaKnown RBP14.24□□□□□ -0.13
SEC13-216ENST00000479868 SAMD3Q8N6K7 520 aa14.24□□□□□ -0.13
SEC13-216ENST00000479868 RNF146Q9NTX7 359 aa14.24□□□□□ -0.13
SEC13-216ENST00000479868 TBC1D22BQ9NU19 505 aa14.24□□□□□ -0.13
SEC13-216ENST00000479868 DMAC2Q9NW81 257 aa14.24□□□□□ -0.13
SEC13-216ENST00000479868 SNX12Q9UMY4 172 aa14.24□□□□□ -0.13
SEC13-216ENST00000479868 TESPA1A2RU30 521 aaPredicted RBP14.24□□□□□ -0.13
SEC13-216ENST00000479868 K7ENM7 598 aa14.24□□□□□ -0.13
SEC13-216ENST00000479868 VSNL1P62760 191 aa14.24□□□□□ -0.13
SEC13-216ENST00000479868 PTK2Q05397 1052 aa14.24□□□□□ -0.13
SEC13-216ENST00000479868 LONRF2Q1L5Z9 754 aa14.24□□□□□ -0.13
SEC13-216ENST00000479868 ARHGEF16Q5VV41 709 aa14.24□□□□□ -0.13
SEC13-216ENST00000479868 GJB7Q6PEY0 223 aa14.24□□□□□ -0.13
SEC13-216ENST00000479868 SMAP1Q8IYB5 467 aaPredicted RBP14.24□□□□□ -0.13
SEC13-216ENST00000479868 REPS2Q8NFH8 660 aa14.24□□□□□ -0.13
SEC13-216ENST00000479868 ALS2CR12Q96Q35 445 aa14.24□□□□□ -0.13
SEC13-216ENST00000479868 MKNK1Q9BUB5 465 aa14.24□□□□□ -0.13
SEC13-216ENST00000479868 AS3MTQ9HBK9 375 aa14.24□□□□□ -0.13
SEC13-216ENST00000479868 PICK1Q9NRD5 415 aa14.24□□□□□ -0.13
SEC13-216ENST00000479868 DBR1Q9UK59 544 aaKnown RBP14.24□□□□□ -0.13
SEC13-216ENST00000479868 CCNE2O96020 404 aa14.23□□□□□ -0.13
SEC13-216ENST00000479868 YWHABP31946 246 aaKnown RBP14.23□□□□□ -0.13
SEC13-216ENST00000479868 UTP14CQ5TAP6 766 aaKnown RBP14.23□□□□□ -0.13
SEC13-216ENST00000479868 SNRNP48Q6IEG0 339 aaKnown RBP14.23□□□□□ -0.13
SEC13-216ENST00000479868 ZNF571Q7Z3V5 609 aaPredicted RBP14.23□□□□□ -0.13
SEC13-216ENST00000479868 NLGN2Q8NFZ4 835 aa14.23□□□□□ -0.13
SEC13-216ENST00000479868 PACSIN1Q9BY11 444 aa14.23□□□□□ -0.13
SEC13-216ENST00000479868 FUT8Q9BYC5 575 aa14.23□□□□□ -0.13
SEC13-216ENST00000479868 RNF216Q9NWF9 866 aaPredicted RBP14.23□□□□□ -0.13
SEC13-216ENST00000479868 KIAA1217Q5T5P2 1943 aa14.23□□□□□ -0.13
SEC13-216ENST00000479868 GTPBP10A4D1E9 387 aaKnown RBP14.23□□□□□ -0.13
SEC13-216ENST00000479868 ATP8B1O43520 1251 aa14.23□□□□□ -0.13
SEC13-216ENST00000479868 LYPLA2O95372 231 aa14.23□□□□□ -0.13
SEC13-216ENST00000479868 FDX1P10109 184 aa14.23□□□□□ -0.13
SEC13-216ENST00000479868 NFRKBQ6P4R8 1299 aa14.23□□□□□ -0.13
SEC13-216ENST00000479868 CREG2Q8IUH2 290 aa14.23□□□□□ -0.13
SEC13-216ENST00000479868 SYCP3Q8IZU3 236 aa14.23□□□□□ -0.13
SEC13-216ENST00000479868 COG1Q8WTW3 980 aa14.23□□□□□ -0.13
SEC13-216ENST00000479868 FBXL5Q9UKA1 691 aa14.23□□□□□ -0.13
SEC13-216ENST00000479868 FRMD4BQ9Y2L6 1034 aa14.23□□□□□ -0.13
SEC13-216ENST00000479868 WDR81Q562E7 1941 aa14.22□□□□□ -0.13
SEC13-216ENST00000479868 TISP43B9A030 160 aa14.22□□□□□ -0.13
SEC13-216ENST00000479868 NCK2O43639 380 aa14.22□□□□□ -0.13
SEC13-216ENST00000479868 PPP1R12BO60237 982 aaPredicted RBP14.22□□□□□ -0.13
SEC13-216ENST00000479868 KLRC1P26715 233 aa14.22□□□□□ -0.13
SEC13-216ENST00000479868 FMO5P49326 533 aa14.22□□□□□ -0.13
SEC13-216ENST00000479868 JAM2P57087 298 aa14.22□□□□□ -0.13
SEC13-216ENST00000479868 CKAP4Q07065 602 aaKnown RBP14.22□□□□□ -0.13
SEC13-216ENST00000479868 CBWD6Q4V339 395 aa14.22□□□□□ -0.13
SEC13-216ENST00000479868 CBWD3Q5JTY5 395 aa14.22□□□□□ -0.13
SEC13-216ENST00000479868 CBWD5Q5RIA9 395 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms