RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 ANGPT1Q15389 498 aa19.82■□□□□ 0.76
HMGN1-212ENST00000479586 KIZQ2M2Z5 673 aa19.82■□□□□ 0.76
HMGN1-212ENST00000479586 FAM43BQ6ZT52 329 aaPredicted RBP19.82■□□□□ 0.76
HMGN1-212ENST00000479586 CCDC105Q8IYK2 499 aa19.82■□□□□ 0.76
HMGN1-212ENST00000479586 FEZF2Q8TBJ5 459 aa19.82■□□□□ 0.76
HMGN1-212ENST00000479586 OSMRQ99650 979 aa19.82■□□□□ 0.76
HMGN1-212ENST00000479586 KCNH7Q9NS40 1196 aa19.82■□□□□ 0.76
HMGN1-212ENST00000479586 SPG21Q9NZD8 308 aa19.82■□□□□ 0.76
HMGN1-212ENST00000479586 TAF6LQ9Y6J9 622 aa19.82■□□□□ 0.76
HMGN1-212ENST00000479586 ODR4Q5SWX8 454 aa19.81■□□□□ 0.76
HMGN1-212ENST00000479586 KIAA1841Q6NSI8 718 aa19.81■□□□□ 0.76
HMGN1-212ENST00000479586 LRRC43Q8N309 656 aa19.81■□□□□ 0.76
HMGN1-212ENST00000479586 CYP2W1Q8TAV3 490 aa19.81■□□□□ 0.76
HMGN1-212ENST00000479586 OSBPL3Q9H4L5 887 aa19.81■□□□□ 0.76
HMGN1-212ENST00000479586 DBR1Q9UK59 544 aaKnown RBP19.81■□□□□ 0.76
HMGN1-212ENST00000479586 PCDHA6Q9UN73 950 aa19.81■□□□□ 0.76
HMGN1-212ENST00000479586 PCDHA8Q9Y5H6 950 aa19.81■□□□□ 0.76
HMGN1-212ENST00000479586 CEP250Q9BV73 2442 aa19.81■□□□□ 0.76
HMGN1-212ENST00000479586 PLEKHA8P1O95397 391 aa19.8■□□□□ 0.76
HMGN1-212ENST00000479586 CYP21A2P08686 494 aa19.8■□□□□ 0.76
HMGN1-212ENST00000479586 CA8P35219 290 aa19.8■□□□□ 0.76
HMGN1-212ENST00000479586 ITGB3BPQ13352 177 aaPredicted RBP19.8■□□□□ 0.76
HMGN1-212ENST00000479586 SART3Q15020 963 aaKnown RBP19.8■□□□□ 0.76
HMGN1-212ENST00000479586 B4GALNT3Q6L9W6 998 aa19.8■□□□□ 0.76
HMGN1-212ENST00000479586 SLC39A11Q8N1S5 342 aa19.8■□□□□ 0.76
HMGN1-212ENST00000479586 PLCD3Q8N3E9 789 aa19.8■□□□□ 0.76
HMGN1-212ENST00000479586 SDF4Q9BRK5 362 aa19.8■□□□□ 0.76
HMGN1-212ENST00000479586 DENND4AQ7Z401 1863 aa19.79■□□□□ 0.76
HMGN1-212ENST00000479586 NFASCO94856 1347 aa19.79■□□□□ 0.76
HMGN1-212ENST00000479586 SPDYE3A6NKU9 549 aa19.79■□□□□ 0.76
HMGN1-212ENST00000479586 EOMESO95936 686 aa19.79■□□□□ 0.76
HMGN1-212ENST00000479586 CRYBB1P53674 252 aaPredicted RBP19.79■□□□□ 0.76
HMGN1-212ENST00000479586 ANTXR2P58335 489 aa19.79■□□□□ 0.76
HMGN1-212ENST00000479586 DGLUCYQ7Z3D6 616 aa19.79■□□□□ 0.76
HMGN1-212ENST00000479586 RALYLQ86SE5 291 aaKnown RBP19.79■□□□□ 0.76
HMGN1-212ENST00000479586 SRBD1Q8N5C6 995 aaKnown RBP19.79■□□□□ 0.76
HMGN1-212ENST00000479586 DTWD2Q8NBA8 298 aa19.79■□□□□ 0.76
HMGN1-212ENST00000479586 CTCFLQ8NI51 663 aaPredicted RBP19.79■□□□□ 0.76
HMGN1-212ENST00000479586 KCNG4Q8TDN1 519 aa19.79■□□□□ 0.76
HMGN1-212ENST00000479586 MXRA8Q9BRK3 442 aa19.79■□□□□ 0.76
HMGN1-212ENST00000479586 USTQ9Y2C2 406 aa19.79■□□□□ 0.76
HMGN1-212ENST00000479586 hCG_1642624A0A1W2PR95 340 aa19.78■□□□□ 0.76
HMGN1-212ENST00000479586 ZBTB42B2RXF5 422 aa19.78■□□□□ 0.76
HMGN1-212ENST00000479586 HOXA2O43364 376 aa19.78■□□□□ 0.76
HMGN1-212ENST00000479586 HBP1O60381 514 aa19.78■□□□□ 0.76
HMGN1-212ENST00000479586 ATG7O95352 703 aa19.78■□□□□ 0.76
HMGN1-212ENST00000479586 EPCAMP16422 314 aa19.78■□□□□ 0.76
HMGN1-212ENST00000479586 SLC26A2P50443 739 aa19.78■□□□□ 0.76
HMGN1-212ENST00000479586 ATAT1Q5SQI0 421 aa19.78■□□□□ 0.76
HMGN1-212ENST00000479586 KIAA2013Q8IYS2 634 aa19.78■□□□□ 0.76
HMGN1-212ENST00000479586 ZNF654Q8IZM8 581 aa19.78■□□□□ 0.76
HMGN1-212ENST00000479586 ABI1Q8IZP0 508 aa19.78■□□□□ 0.76
HMGN1-212ENST00000479586 CMTR1Q8N1G2 835 aaKnown RBP19.78■□□□□ 0.76
HMGN1-212ENST00000479586 IGDCC4Q8TDY8 1250 aa19.78■□□□□ 0.76
HMGN1-212ENST00000479586 AUTS2Q8WXX7 1259 aa19.78■□□□□ 0.76
HMGN1-212ENST00000479586 CYP26B1Q9NR63 512 aa19.78■□□□□ 0.76
HMGN1-212ENST00000479586 DZANK1Q9NVP4 752 aa19.78■□□□□ 0.76
HMGN1-212ENST00000479586 IGKV6D-21A0A0A0MT36 114 aa19.77■□□□□ 0.76
HMGN1-212ENST00000479586 BACH1O14867 736 aa19.77■□□□□ 0.76
HMGN1-212ENST00000479586 GPR32O75388 356 aa19.77■□□□□ 0.76
HMGN1-212ENST00000479586 CXCL14O95715 111 aa19.77■□□□□ 0.76
HMGN1-212ENST00000479586 CCNE2O96020 404 aa19.77■□□□□ 0.76
HMGN1-212ENST00000479586 VTNP04004 478 aa19.77■□□□□ 0.76
HMGN1-212ENST00000479586 SMARCA1P28370 1054 aa19.77■□□□□ 0.76
HMGN1-212ENST00000479586 KIF5BP33176 963 aa19.77■□□□□ 0.76
HMGN1-212ENST00000479586 CLLU1OSQ5K130 101 aa19.77■□□□□ 0.76
HMGN1-212ENST00000479586 RNF169Q8NCN4 708 aa19.77■□□□□ 0.76
HMGN1-212ENST00000479586 NCOA7Q8NI08 942 aa19.77■□□□□ 0.76
HMGN1-212ENST00000479586 MAP3K14Q99558 947 aa19.77■□□□□ 0.76
HMGN1-212ENST00000479586 U3KPZ7 1027 aaPredicted RBP19.77■□□□□ 0.76
HMGN1-212ENST00000479586 COL1A2P08123 1366 aa19.77■□□□□ 0.76
HMGN1-212ENST00000479586 TPRP12270 2363 aaKnown RBP19.77■□□□□ 0.75
HMGN1-212ENST00000479586 OTOGLQ3ZCN5 2332 aa19.76■□□□□ 0.75
HMGN1-212ENST00000479586 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.76■□□□□ 0.75
HMGN1-212ENST00000479586 NT5C1B-RDH14C9J2C7 533 aa19.76■□□□□ 0.75
HMGN1-212ENST00000479586 E7EWF7 191 aa19.76■□□□□ 0.75
HMGN1-212ENST00000479586 DDAH1O94760 285 aa19.76■□□□□ 0.75
HMGN1-212ENST00000479586 C22orf31O95567 290 aa19.76■□□□□ 0.75
HMGN1-212ENST00000479586 METAP2P50579 478 aaKnown RBP eCLIP19.76■□□□□ 0.75
HMGN1-212ENST00000479586 ZNF484Q5JVG2 852 aa19.76■□□□□ 0.75
HMGN1-212ENST00000479586 TMC5Q6UXY8 1006 aa19.76■□□□□ 0.75
HMGN1-212ENST00000479586 CHD1LQ86WJ1 897 aa19.76■□□□□ 0.75
HMGN1-212ENST00000479586 ECHDC2Q86YB7 292 aa19.76■□□□□ 0.75
HMGN1-212ENST00000479586 CCDC60Q8IWA6 550 aaPredicted RBP19.76■□□□□ 0.75
HMGN1-212ENST00000479586 SIX5Q8N196 739 aa19.76■□□□□ 0.75
HMGN1-212ENST00000479586 RTP3Q9BQQ7 232 aa19.76■□□□□ 0.75
HMGN1-212ENST00000479586 LY9Q9HBG7 655 aa19.76■□□□□ 0.75
HMGN1-212ENST00000479586 AGO4Q9HCK5 861 aaKnown RBP19.76■□□□□ 0.75
HMGN1-212ENST00000479586 FBXL21Q9UKT6 434 aa19.76■□□□□ 0.75
HMGN1-212ENST00000479586 DUSP12Q9UNI6 340 aa19.76■□□□□ 0.75
HMGN1-212ENST00000479586 KMT2BQ9UMN6 2715 aaPredicted RBP19.76■□□□□ 0.75
HMGN1-212ENST00000479586 DDX39AO00148 427 aaKnown RBP19.75■□□□□ 0.75
HMGN1-212ENST00000479586 LMNAP02545 664 aaKnown RBP19.75■□□□□ 0.75
HMGN1-212ENST00000479586 PTH1RQ03431 593 aa19.75■□□□□ 0.75
HMGN1-212ENST00000479586 TDGQ13569 410 aa19.75■□□□□ 0.75
HMGN1-212ENST00000479586 DIEXFQ68CQ4 756 aaKnown RBP19.75■□□□□ 0.75
HMGN1-212ENST00000479586 ABHD15Q6UXT9 468 aa19.75■□□□□ 0.75
HMGN1-212ENST00000479586 SMC5Q8IY18 1101 aa19.75■□□□□ 0.75
HMGN1-212ENST00000479586 HELQQ8TDG4 1101 aa19.75■□□□□ 0.75
HMGN1-212ENST00000479586 PGBD1Q96JS3 809 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms