RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 FBXO47Q5MNV8 452 aa22.87■■□□□ 1.25
VARS-224ENST00000479051 ODR4Q5SWX8 454 aa22.87■■□□□ 1.25
VARS-224ENST00000479051 TSHZ1Q6ZSZ6 1077 aa22.87■■□□□ 1.25
VARS-224ENST00000479051 CATSPER3Q86XQ3 398 aa22.87■■□□□ 1.25
VARS-224ENST00000479051 LINC01465Q8N7H1 131 aa22.87■■□□□ 1.25
VARS-224ENST00000479051 SNX29Q8TEQ0 813 aa22.87■■□□□ 1.25
VARS-224ENST00000479051 NACC1Q96RE7 527 aa22.87■■□□□ 1.25
VARS-224ENST00000479051 CEP89Q96ST8 783 aa22.87■■□□□ 1.25
VARS-224ENST00000479051 CXXC1Q9P0U4 656 aaPredicted RBP22.87■■□□□ 1.25
VARS-224ENST00000479051 EVPLQ92817 2033 aa22.87■■□□□ 1.25
VARS-224ENST00000479051 RANBP2P49792 3224 aaKnown RBP22.87■■□□□ 1.25
VARS-224ENST00000479051 IGKV6-21A0A0C4DH24 114 aa22.86■■□□□ 1.25
VARS-224ENST00000479051 VWA3AA6NCI4 1184 aa22.86■■□□□ 1.25
VARS-224ENST00000479051 MED24O75448 989 aa22.86■■□□□ 1.25
VARS-224ENST00000479051 VTNP04004 478 aa22.86■■□□□ 1.25
VARS-224ENST00000479051 SPATA31C1P0DKV0 1188 aa22.86■■□□□ 1.25
VARS-224ENST00000479051 SMAD3P84022 425 aaKnown RBP22.86■■□□□ 1.25
VARS-224ENST00000479051 LPIN1Q14693 890 aa22.86■■□□□ 1.25
VARS-224ENST00000479051 SCLT1Q96NL6 688 aa22.86■■□□□ 1.25
VARS-224ENST00000479051 SLC9A7Q96T83 725 aa22.86■■□□□ 1.25
VARS-224ENST00000479051 TET1Q8NFU7 2136 aa22.85■■□□□ 1.25
VARS-224ENST00000479051 CRYBB1P53674 252 aaPredicted RBP22.85■■□□□ 1.25
VARS-224ENST00000479051 FAM43BQ6ZT52 329 aaPredicted RBP22.85■■□□□ 1.25
VARS-224ENST00000479051 PHOSPHO2Q8TCD6 241 aa22.85■■□□□ 1.25
VARS-224ENST00000479051 TCP11Q8WWU5 503 aa22.85■■□□□ 1.25
VARS-224ENST00000479051 DHX33Q9H6R0 707 aaKnown RBP22.85■■□□□ 1.25
VARS-224ENST00000479051 DGAT1O75907 488 aa22.84■■□□□ 1.25
VARS-224ENST00000479051 ZSCAN22P10073 491 aaPredicted RBP22.84■■□□□ 1.25
VARS-224ENST00000479051 ATP2A2P16615 1042 aaKnown RBP22.84■■□□□ 1.25
VARS-224ENST00000479051 RARRES1P49788 294 aa22.84■■□□□ 1.25
VARS-224ENST00000479051 FXR1P51114 621 aaKnown RBP eCLIP22.84■■□□□ 1.251e-6■■■□□ 18.6
VARS-224ENST00000479051 NLRP11P59045 1033 aaKnown RBP22.84■■□□□ 1.25
VARS-224ENST00000479051 PAK2Q13177 524 aa22.84■■□□□ 1.25
VARS-224ENST00000479051 IL17AQ16552 155 aa22.84■■□□□ 1.25
VARS-224ENST00000479051 KIZQ2M2Z5 673 aa22.84■■□□□ 1.25
VARS-224ENST00000479051 POTEGQ6S5H5 508 aa22.84■■□□□ 1.25
VARS-224ENST00000479051 PIGOQ8TEQ8 1089 aa22.84■■□□□ 1.25
VARS-224ENST00000479051 AK8Q96MA6 479 aa22.84■■□□□ 1.25
VARS-224ENST00000479051 ZNF396Q96N95 335 aaPredicted RBP22.84■■□□□ 1.25
VARS-224ENST00000479051 PPP1R16BQ96T49 567 aa22.84■■□□□ 1.25
VARS-224ENST00000479051 MTRQ99707 1265 aa22.84■■□□□ 1.25
VARS-224ENST00000479051 ATP6V0A4Q9HBG4 840 aa22.84■■□□□ 1.25
VARS-224ENST00000479051 SUCLA2Q9P2R7 463 aaPredicted RBP22.84■■□□□ 1.25
VARS-224ENST00000479051 DBR1Q9UK59 544 aaKnown RBP22.84■■□□□ 1.25
VARS-224ENST00000479051 ZBTB39O15060 712 aa22.83■■□□□ 1.25
VARS-224ENST00000479051 WDR5P61964 334 aaKnown RBP22.83■■□□□ 1.25
VARS-224ENST00000479051 EMC2Q15006 297 aa22.83■■□□□ 1.25
VARS-224ENST00000479051 FAM173BQ6P4H8 233 aa22.83■■□□□ 1.25
VARS-224ENST00000479051 ZNF579Q8NAF0 562 aaKnown RBP22.83■■□□□ 1.25
VARS-224ENST00000479051 NLRP7Q8WX94 980 aa22.83■■□□□ 1.25
VARS-224ENST00000479051 PSPC1Q8WXF1 523 aaKnown RBP22.83■■□□□ 1.25
VARS-224ENST00000479051 OSMRQ99650 979 aa22.83■■□□□ 1.25
VARS-224ENST00000479051 CLIC4Q9Y696 253 aa22.83■■□□□ 1.25
VARS-224ENST00000479051 SOX1O00570 391 aaPredicted RBP22.82■■□□□ 1.24
VARS-224ENST00000479051 GPR32O75388 356 aa22.82■■□□□ 1.24
VARS-224ENST00000479051 RPS6KA5O75582 802 aa22.82■■□□□ 1.24
VARS-224ENST00000479051 AMHP03971 560 aa22.82■■□□□ 1.24
VARS-224ENST00000479051 CD52P31358 61 aa22.82■■□□□ 1.24
VARS-224ENST00000479051 GPC3P51654 580 aa22.82■■□□□ 1.24
VARS-224ENST00000479051 FOXD4L5Q5VV16 416 aaPredicted RBP22.82■■□□□ 1.24
VARS-224ENST00000479051 FOXD4L4Q8WXT5 416 aaPredicted RBP22.82■■□□□ 1.24
VARS-224ENST00000479051 CDK5RAP3Q96JB5 506 aa22.82■■□□□ 1.24
VARS-224ENST00000479051 FTHL17Q9BXU8 183 aa22.82■■□□□ 1.24
VARS-224ENST00000479051 KIAA1024Q9UPX6 916 aa22.82■■□□□ 1.24
VARS-224ENST00000479051 SIP14410 1827 aa22.82■■□□□ 1.24
VARS-224ENST00000479051 ARID2Q68CP9 1835 aa22.81■■□□□ 1.24
VARS-224ENST00000479051 ARHGEF35A5YM69 484 aa22.81■■□□□ 1.24
VARS-224ENST00000479051 PP2D1A8MPX8 630 aa22.81■■□□□ 1.24
VARS-224ENST00000479051 GPR182O15218 404 aa22.81■■□□□ 1.24
VARS-224ENST00000479051 SLC26A4O43511 780 aa22.81■■□□□ 1.24
VARS-224ENST00000479051 F13A1P00488 732 aa22.81■■□□□ 1.24
VARS-224ENST00000479051 LONP1P36776 959 aaKnown RBP22.81■■□□□ 1.24
VARS-224ENST00000479051 CEBPZQ03701 1054 aaKnown RBP22.81■■□□□ 1.24
VARS-224ENST00000479051 DRP2Q13474 957 aa22.81■■□□□ 1.24
VARS-224ENST00000479051 RAB30Q15771 203 aa22.81■■□□□ 1.24
VARS-224ENST00000479051 GPR153Q6NV75 609 aa22.81■■□□□ 1.24
VARS-224ENST00000479051 ZNF410Q86VK4 478 aa22.81■■□□□ 1.24
VARS-224ENST00000479051 RHPN2Q8IUC4 686 aa22.81■■□□□ 1.24
VARS-224ENST00000479051 GCOM2Q9BZD3 368 aaPredicted RBP22.81■■□□□ 1.24
VARS-224ENST00000479051 OSBPL7Q9BZF2 842 aa22.81■■□□□ 1.24
VARS-224ENST00000479051 NT5C3AQ9H0P0 336 aa22.81■■□□□ 1.24
VARS-224ENST00000479051 ADAMTS10Q9H324 1103 aa22.81■■□□□ 1.24
VARS-224ENST00000479051 AGO3Q9H9G7 860 aaKnown RBP22.81■■□□□ 1.24
VARS-224ENST00000479051 BMP2KQ9NSY1 1161 aaPredicted RBP22.81■■□□□ 1.24
VARS-224ENST00000479051 DDX19AQ9NUU7 478 aaKnown RBP22.81■■□□□ 1.24
VARS-224ENST00000479051 MSRAQ9UJ68 235 aa22.81■■□□□ 1.24
VARS-224ENST00000479051 PADI3Q9ULW8 664 aa22.81■■□□□ 1.24
VARS-224ENST00000479051 DNM3Q9UQ16 869 aa22.81■■□□□ 1.24
VARS-224ENST00000479051 ASAP2O43150 1006 aa22.8■■□□□ 1.24
VARS-224ENST00000479051 EIF4BP23588 611 aaKnown RBP22.8■■□□□ 1.24
VARS-224ENST00000479051 CDC25AP30304 524 aa22.8■■□□□ 1.24
VARS-224ENST00000479051 UBA7P41226 1012 aa22.8■■□□□ 1.24
VARS-224ENST00000479051 NFX1Q12986 1120 aaKnown RBP22.8■■□□□ 1.24
VARS-224ENST00000479051 MKRN4PQ13434 485 aaPredicted RBP22.8■■□□□ 1.24
VARS-224ENST00000479051 ZRSR1Q15695 479 aaKnown RBP22.8■■□□□ 1.24
VARS-224ENST00000479051 TCTN1Q2MV58 587 aa22.8■■□□□ 1.24
VARS-224ENST00000479051 KCTD17Q8N5Z5 321 aa22.8■■□□□ 1.24
VARS-224ENST00000479051 MCPH1Q8NEM0 835 aa22.8■■□□□ 1.24
VARS-224ENST00000479051 TMEM143Q96AN5 459 aa22.8■■□□□ 1.24
VARS-224ENST00000479051 LRCH3Q96II8 777 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms