RNA–Protein interactions for RNA: ENST00000478369.5

VANGL1-206, Transcript of VANGL planar cell polarity protein 1, humanhuman

TSL 3

Gene VANGL1, Length 363 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-206ENST00000478369 STK36Q9NRP7 1315 aa12.24□□□□□ -0.45
VANGL1-206ENST00000478369 FAM50BQ9Y247 325 aa12.24□□□□□ -0.45
VANGL1-206ENST00000478369 GINS2Q9Y248 185 aa12.24□□□□□ -0.45
VANGL1-206ENST00000478369 C9IYK1 514 aa12.23□□□□□ -0.45
VANGL1-206ENST00000478369 GRM6O15303 877 aa12.23□□□□□ -0.45
VANGL1-206ENST00000478369 ZNF862O60290 1169 aa12.23□□□□□ -0.45
VANGL1-206ENST00000478369 PFKFB2O60825 505 aa12.23□□□□□ -0.45
VANGL1-206ENST00000478369 VTNP04004 478 aa12.23□□□□□ -0.45
VANGL1-206ENST00000478369 GCFC2P16383 781 aaKnown RBP12.23□□□□□ -0.45
VANGL1-206ENST00000478369 KCNA5P22460 613 aa12.23□□□□□ -0.45
VANGL1-206ENST00000478369 FAM189BP81408 668 aa12.23□□□□□ -0.45
VANGL1-206ENST00000478369 PRKCEQ02156 737 aa12.23□□□□□ -0.45
VANGL1-206ENST00000478369 SCRN1Q12765 414 aa12.23□□□□□ -0.45
VANGL1-206ENST00000478369 NPY5RQ15761 445 aa12.23□□□□□ -0.45
VANGL1-206ENST00000478369 KIZQ2M2Z5 673 aa12.23□□□□□ -0.45
VANGL1-206ENST00000478369 EFCAB12Q6NXP0 572 aa12.23□□□□□ -0.45
VANGL1-206ENST00000478369 B3GNT9Q6UX72 402 aa12.23□□□□□ -0.45
VANGL1-206ENST00000478369 MIER3Q7Z3K6 550 aa12.23□□□□□ -0.45
VANGL1-206ENST00000478369 ETNPPLQ8TBG4 499 aa12.23□□□□□ -0.45
VANGL1-206ENST00000478369 WASF1Q92558 559 aa12.23□□□□□ -0.45
VANGL1-206ENST00000478369 PPP2R3CQ969Q6 453 aa12.23□□□□□ -0.45
VANGL1-206ENST00000478369 NECAB3Q96P71 396 aaPredicted RBP12.23□□□□□ -0.45
VANGL1-206ENST00000478369 OSMRQ99650 979 aa12.23□□□□□ -0.45
VANGL1-206ENST00000478369 NAP1L4Q99733 375 aaKnown RBP12.23□□□□□ -0.45
VANGL1-206ENST00000478369 ADAM2Q99965 735 aa12.23□□□□□ -0.45
VANGL1-206ENST00000478369 PHF20Q9BVI0 1012 aa12.23□□□□□ -0.45
VANGL1-206ENST00000478369 C1QTNF1Q9BXJ1 281 aa12.23□□□□□ -0.45
VANGL1-206ENST00000478369 NIFKQ9BYG3 293 aaKnown RBP12.23□□□□□ -0.45
VANGL1-206ENST00000478369 PLAGL2Q9UPG8 496 aa12.23□□□□□ -0.45
VANGL1-206ENST00000478369 AKT3Q9Y243 479 aa12.23□□□□□ -0.45
VANGL1-206ENST00000478369 MRPL42Q9Y6G3 142 aaKnown RBP12.23□□□□□ -0.45
VANGL1-206ENST00000478369 BRWD1Q9NSI6 2320 aa12.23□□□□□ -0.45
VANGL1-206ENST00000478369 TCF20Q9UGU0 1960 aaKnown RBP12.23□□□□□ -0.45
VANGL1-206ENST00000478369 LOXHD1Q8IVV2 1947 aa12.23□□□□□ -0.45
VANGL1-206ENST00000478369 EVPLQ92817 2033 aa12.22□□□□□ -0.45
VANGL1-206ENST00000478369 MGEA5O60502 916 aa12.22□□□□□ -0.45
VANGL1-206ENST00000478369 EIF4BP23588 611 aaKnown RBP12.22□□□□□ -0.45
VANGL1-206ENST00000478369 CLCN3P51790 818 aa12.22□□□□□ -0.45
VANGL1-206ENST00000478369 TBC1D8BQ0IIM8 1120 aa12.22□□□□□ -0.45
VANGL1-206ENST00000478369 TARBP2Q15633 366 aaKnown RBP12.22□□□□□ -0.45
VANGL1-206ENST00000478369 CSPP1Q1MSJ5 1256 aa12.22□□□□□ -0.45
VANGL1-206ENST00000478369 XKR3Q5GH77 459 aa12.22□□□□□ -0.45
VANGL1-206ENST00000478369 PPP4R3AQ6IN85 833 aa12.22□□□□□ -0.45
VANGL1-206ENST00000478369 TRMT1LQ7Z2T5 733 aaKnown RBP12.22□□□□□ -0.45
VANGL1-206ENST00000478369 FAM228AQ86W67 206 aa12.22□□□□□ -0.45
VANGL1-206ENST00000478369 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.22□□□□□ -0.45
VANGL1-206ENST00000478369 FAM20AQ96MK3 541 aa12.22□□□□□ -0.45
VANGL1-206ENST00000478369 LARP6Q9BRS8 491 aaKnown RBP12.22□□□□□ -0.45
VANGL1-206ENST00000478369 ADAMTS10Q9H324 1103 aa12.22□□□□□ -0.45
VANGL1-206ENST00000478369 AAASQ9NRG9 546 aa12.22□□□□□ -0.45
VANGL1-206ENST00000478369 TMEM161AQ9NX61 479 aa12.22□□□□□ -0.45
VANGL1-206ENST00000478369 DDX25Q9UHL0 483 aaKnown RBP12.22□□□□□ -0.45
VANGL1-206ENST00000478369 CCDC194A0A1B0GVG4 234 aa12.21□□□□□ -0.45
VANGL1-206ENST00000478369 GRXCR2A6NFK2 248 aa12.21□□□□□ -0.45
VANGL1-206ENST00000478369 TBX3O15119 743 aa12.21□□□□□ -0.45
VANGL1-206ENST00000478369 HOXA2O43364 376 aa12.21□□□□□ -0.45
VANGL1-206ENST00000478369 CHMP2AO43633 222 aa12.21□□□□□ -0.45
VANGL1-206ENST00000478369 DKC1O60832 514 aaKnown RBP eCLIP12.21□□□□□ -0.45
VANGL1-206ENST00000478369 SEC24BO95487 1268 aa12.21□□□□□ -0.45
VANGL1-206ENST00000478369 TDP2O95551 362 aa12.21□□□□□ -0.45
VANGL1-206ENST00000478369 ZSCAN20P17040 1043 aaPredicted RBP12.21□□□□□ -0.45
VANGL1-206ENST00000478369 DNM2P50570 870 aa12.21□□□□□ -0.45
VANGL1-206ENST00000478369 NLRP11P59045 1033 aaKnown RBP12.21□□□□□ -0.45
VANGL1-206ENST00000478369 UBE3AQ05086 875 aa12.21□□□□□ -0.45
VANGL1-206ENST00000478369 DSC3Q14574 896 aa12.21□□□□□ -0.45
VANGL1-206ENST00000478369 UGCGQ16739 394 aa12.21□□□□□ -0.45
VANGL1-206ENST00000478369 CTC1Q2NKJ3 1217 aa12.21□□□□□ -0.45
VANGL1-206ENST00000478369 PTCRAQ6ISU1 281 aaPredicted RBP12.21□□□□□ -0.45
VANGL1-206ENST00000478369 NEK8Q86SG6 692 aa12.21□□□□□ -0.45
VANGL1-206ENST00000478369 FAM178BQ8IXR5 827 aa12.21□□□□□ -0.45
VANGL1-206ENST00000478369 SPPL3Q8TCT6 385 aa12.21□□□□□ -0.45
VANGL1-206ENST00000478369 AIFM3Q96NN9 605 aa12.21□□□□□ -0.45
VANGL1-206ENST00000478369 JPH2Q9BR39 696 aaPredicted RBP12.21□□□□□ -0.45
VANGL1-206ENST00000478369 ATP6V0A4Q9HBG4 840 aa12.21□□□□□ -0.45
VANGL1-206ENST00000478369 TPCN1Q9ULQ1 816 aa12.21□□□□□ -0.45
VANGL1-206ENST00000478369 PPME1Q9Y570 386 aa12.21□□□□□ -0.45
VANGL1-206ENST00000478369 PCDHB12Q9Y5F1 795 aa12.21□□□□□ -0.45
VANGL1-206ENST00000478369 WDR81Q562E7 1941 aa12.21□□□□□ -0.46
VANGL1-206ENST00000478369 IGKV6-21A0A0C4DH24 114 aa12.2□□□□□ -0.46
VANGL1-206ENST00000478369 FSD2A1L4K1 749 aa12.2□□□□□ -0.46
VANGL1-206ENST00000478369 ITGB1P05556 798 aa12.2□□□□□ -0.46
VANGL1-206ENST00000478369 GPC3P51654 580 aa12.2□□□□□ -0.46
VANGL1-206ENST00000478369 PSMC5P62195 406 aa12.2□□□□□ -0.46
VANGL1-206ENST00000478369 PPP2R5CQ13362 524 aa12.2□□□□□ -0.46
VANGL1-206ENST00000478369 INF2Q27J81 1249 aa12.2□□□□□ -0.46
VANGL1-206ENST00000478369 LETM2Q2VYF4 491 aa12.2□□□□□ -0.46
VANGL1-206ENST00000478369 PAN2Q504Q3 1202 aaKnown RBP12.2□□□□□ -0.46
VANGL1-206ENST00000478369 EXOC8Q8IYI6 725 aa12.2□□□□□ -0.46
VANGL1-206ENST00000478369 LRRC71Q8N4P6 559 aa12.2□□□□□ -0.46
VANGL1-206ENST00000478369 KLHL23Q8NBE8 558 aa12.2□□□□□ -0.46
VANGL1-206ENST00000478369 RSPH1Q8WYR4 309 aa12.2□□□□□ -0.46
VANGL1-206ENST00000478369 INO80BQ9C086 356 aaPredicted RBP12.2□□□□□ -0.46
VANGL1-206ENST00000478369 ALG13Q9NP73 1137 aaKnown RBP12.2□□□□□ -0.46
VANGL1-206ENST00000478369 KCNMB3Q9NPA1 279 aa12.2□□□□□ -0.46
VANGL1-206ENST00000478369 CLDND1Q9NY35 253 aa12.2□□□□□ -0.46
VANGL1-206ENST00000478369 PRKAG3Q9UGI9 489 aa12.2□□□□□ -0.46
VANGL1-206ENST00000478369 KCNJ14Q9UNX9 436 aa12.2□□□□□ -0.46
VANGL1-206ENST00000478369 TBKBP1A7MCY6 615 aa12.19□□□□□ -0.46
VANGL1-206ENST00000478369 H3BQ06 376 aaPredicted RBP12.19□□□□□ -0.46
VANGL1-206ENST00000478369 STBD1O95210 358 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms