RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 ARMCX3Q9UH62 379 aaPredicted RBP8.74□□□□□ -1.01
VMA21-203ENST00000477649 MYO6Q9UM54 1294 aa8.74□□□□□ -1.01
VMA21-203ENST00000477649 EXOC7Q9UPT5 735 aa8.74□□□□□ -1.01
VMA21-203ENST00000477649 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.74□□□□□ -1.01
VMA21-203ENST00000477649 TTC26A0AVF1 554 aa8.73□□□□□ -1.01
VMA21-203ENST00000477649 MAPK13O15264 365 aa8.73□□□□□ -1.01
VMA21-203ENST00000477649 XRCC5P13010 732 aaKnown RBP8.73□□□□□ -1.01
VMA21-203ENST00000477649 PLS3P13797 630 aa8.73□□□□□ -1.01
VMA21-203ENST00000477649 KCNA2P16389 499 aa8.73□□□□□ -1.01
VMA21-203ENST00000477649 NR2F2P24468 414 aa8.73□□□□□ -1.01
VMA21-203ENST00000477649 EDNRBP24530 442 aa8.73□□□□□ -1.01
VMA21-203ENST00000477649 ANXA13P27216 316 aa8.73□□□□□ -1.01
VMA21-203ENST00000477649 YWHABP31946 246 aaKnown RBP8.73□□□□□ -1.01
VMA21-203ENST00000477649 PSMC2P35998 433 aaKnown RBP8.73□□□□□ -1.01
VMA21-203ENST00000477649 FXR1P51114 621 aaKnown RBP eCLIP8.73□□□□□ -1.01
VMA21-203ENST00000477649 SMTNP53814 917 aa8.73□□□□□ -1.01
VMA21-203ENST00000477649 HERVK_113P62684 666 aa8.73□□□□□ -1.01
VMA21-203ENST00000477649 TUBB4BP68371 445 aa8.73□□□□□ -1.01
VMA21-203ENST00000477649 CCNA1P78396 465 aa8.73□□□□□ -1.01
VMA21-203ENST00000477649 TTLL12Q14166 644 aaPredicted RBP8.73□□□□□ -1.01
VMA21-203ENST00000477649 NEDD9Q14511 834 aa8.73□□□□□ -1.01
VMA21-203ENST00000477649 PPP2R5AQ15172 486 aa8.73□□□□□ -1.01
VMA21-203ENST00000477649 LRRC41Q15345 812 aa8.73□□□□□ -1.01
VMA21-203ENST00000477649 GPR162Q16538 588 aa8.73□□□□□ -1.01
VMA21-203ENST00000477649 ODR4Q5SWX8 454 aa8.73□□□□□ -1.01
VMA21-203ENST00000477649 TMEM92Q6UXU6 159 aa8.73□□□□□ -1.01
VMA21-203ENST00000477649 GADL1Q6ZQY3 521 aa8.73□□□□□ -1.01
VMA21-203ENST00000477649 EXOC8Q8IYI6 725 aa8.73□□□□□ -1.01
VMA21-203ENST00000477649 C17orf53Q8N3J3 647 aaPredicted RBP8.73□□□□□ -1.01
VMA21-203ENST00000477649 EHBP1Q8NDI1 1231 aa8.73□□□□□ -1.01
VMA21-203ENST00000477649 NEK11Q8NG66 645 aa8.73□□□□□ -1.01
VMA21-203ENST00000477649 PIGOQ8TEQ8 1089 aa8.73□□□□□ -1.01
VMA21-203ENST00000477649 SPIRE2Q8WWL2 714 aa8.73□□□□□ -1.01
VMA21-203ENST00000477649 HPS3Q969F9 1004 aa8.73□□□□□ -1.01
VMA21-203ENST00000477649 GBP3Q9H0R5 595 aa8.73□□□□□ -1.01
VMA21-203ENST00000477649 LUC7LQ9NQ29 371 aaKnown RBP8.73□□□□□ -1.01
VMA21-203ENST00000477649 TRMT1Q9NXH9 659 aaKnown RBP8.73□□□□□ -1.01
VMA21-203ENST00000477649 SLC9A2Q9UBY0 812 aa8.73□□□□□ -1.01
VMA21-203ENST00000477649 FBXL5Q9UKA1 691 aa8.73□□□□□ -1.01
VMA21-203ENST00000477649 PLAGL2Q9UPG8 496 aa8.73□□□□□ -1.01
VMA21-203ENST00000477649 SIK3Q9Y2K2 1263 aa8.73□□□□□ -1.01
VMA21-203ENST00000477649 ADGRG1Q9Y653 693 aa8.73□□□□□ -1.01
VMA21-203ENST00000477649 PAPPA2Q9BXP8 1791 aa8.73□□□□□ -1.01
VMA21-203ENST00000477649 SCN4AP35499 1836 aa8.73□□□□□ -1.01
VMA21-203ENST00000477649 PARP14Q460N5 1801 aa8.73□□□□□ -1.01
VMA21-203ENST00000477649 RLFQ13129 1914 aa8.72□□□□□ -1.01
VMA21-203ENST00000477649 LOC285556D6RIA3 1793 aa8.72□□□□□ -1.01
VMA21-203ENST00000477649 NPHP3-ACAD11A0A0J9YXS1 232 aa8.72□□□□□ -1.01
VMA21-203ENST00000477649 KIF5CO60282 957 aa8.72□□□□□ -1.01
VMA21-203ENST00000477649 HIP1RO75146 1068 aa8.72□□□□□ -1.01
VMA21-203ENST00000477649 PPP1R37O75864 691 aa8.72□□□□□ -1.01
VMA21-203ENST00000477649 DGAT1O75907 488 aa8.72□□□□□ -1.01
VMA21-203ENST00000477649 ATG7O95352 703 aa8.72□□□□□ -1.01
VMA21-203ENST00000477649 NR3C1P04150 777 aa8.72□□□□□ -1.01
VMA21-203ENST00000477649 ALDH5A1P51649 535 aaPredicted RBP8.72□□□□□ -1.01
VMA21-203ENST00000477649 DGKZQ13574 1117 aa8.72□□□□□ -1.01
VMA21-203ENST00000477649 PRKG1Q13976 671 aa8.72□□□□□ -1.01
VMA21-203ENST00000477649 XKR3Q5GH77 459 aa8.72□□□□□ -1.01
VMA21-203ENST00000477649 SMYD5Q6GMV2 418 aa8.72□□□□□ -1.01
VMA21-203ENST00000477649 MTERF4Q7Z6M4 381 aaKnown RBP8.72□□□□□ -1.01
VMA21-203ENST00000477649 REXO1L1PQ8IX06 675 aa8.72□□□□□ -1.01
VMA21-203ENST00000477649 NELFCDQ8IXH7 590 aa8.72□□□□□ -1.01
VMA21-203ENST00000477649 BANK1Q8NDB2 785 aa8.72□□□□□ -1.01
VMA21-203ENST00000477649 CPLX3Q8WVH0 158 aa8.72□□□□□ -1.01
VMA21-203ENST00000477649 WNK4Q96J92 1243 aa8.72□□□□□ -1.01
VMA21-203ENST00000477649 ACCSQ96QU6 501 aa8.72□□□□□ -1.01
VMA21-203ENST00000477649 NTPCRQ9BSD7 190 aaKnown RBP8.72□□□□□ -1.01
VMA21-203ENST00000477649 STRA6Q9BX79 667 aa8.72□□□□□ -1.01
VMA21-203ENST00000477649 TSGA10Q9BZW7 698 aa8.72□□□□□ -1.01
VMA21-203ENST00000477649 ASCC2Q9H1I8 757 aaPredicted RBP8.72□□□□□ -1.01
VMA21-203ENST00000477649 HAUS4Q9H6D7 363 aa8.72□□□□□ -1.01
VMA21-203ENST00000477649 ELP3Q9H9T3 547 aa8.72□□□□□ -1.01
VMA21-203ENST00000477649 PLCB1Q9NQ66 1216 aa8.72□□□□□ -1.01
VMA21-203ENST00000477649 TBC1D7Q9P0N9 293 aa8.72□□□□□ -1.01
VMA21-203ENST00000477649 CEP72Q9P209 647 aa8.72□□□□□ -1.01
VMA21-203ENST00000477649 FRMD4BQ9Y2L6 1034 aa8.72□□□□□ -1.01
VMA21-203ENST00000477649 BZW2Q9Y6E2 419 aaKnown RBP8.72□□□□□ -1.01
VMA21-203ENST00000477649 EPN1Q9Y6I3 576 aaPredicted RBP8.72□□□□□ -1.01
VMA21-203ENST00000477649 A0A0G2JMZ2 1700 aa8.71□□□□□ -1.01
VMA21-203ENST00000477649 SSU72P8A0A1W2PR75 194 aa8.71□□□□□ -1.02
VMA21-203ENST00000477649 EIF3CLB5ME19 914 aaKnown RBP8.71□□□□□ -1.02
VMA21-203ENST00000477649 DDX39AO00148 427 aaKnown RBP8.71□□□□□ -1.02
VMA21-203ENST00000477649 KIAA0391O15091 583 aaKnown RBP8.71□□□□□ -1.02
VMA21-203ENST00000477649 P4HA2O15460 535 aa8.71□□□□□ -1.02
VMA21-203ENST00000477649 N4BP1O75113 896 aaKnown RBP8.71□□□□□ -1.02
VMA21-203ENST00000477649 COBLO75128 1261 aa8.71□□□□□ -1.02
VMA21-203ENST00000477649 PRPF6O94906 941 aaKnown RBP8.71□□□□□ -1.02
VMA21-203ENST00000477649 NDUFA10O95299 355 aa8.71□□□□□ -1.02
VMA21-203ENST00000477649 AFPP02771 609 aaKnown RBP8.71□□□□□ -1.02
VMA21-203ENST00000477649 SUPT20HL2P0C7V6 817 aa8.71□□□□□ -1.02
VMA21-203ENST00000477649 MYBP10242 640 aa8.71□□□□□ -1.02
VMA21-203ENST00000477649 CETPP11597 493 aa8.71□□□□□ -1.02
VMA21-203ENST00000477649 RFX1P22670 979 aa8.71□□□□□ -1.02
VMA21-203ENST00000477649 PBX2P40425 430 aa8.71□□□□□ -1.02
VMA21-203ENST00000477649 GCLCP48506 637 aaPredicted RBP8.71□□□□□ -1.02
VMA21-203ENST00000477649 GTF2A2P52657 109 aa8.71□□□□□ -1.02
VMA21-203ENST00000477649 MCCD1P59942 119 aaPredicted RBP8.71□□□□□ -1.02
VMA21-203ENST00000477649 GTF2BQ00403 316 aa8.71□□□□□ -1.02
VMA21-203ENST00000477649 RAD51AP2Q09MP3 1159 aa8.71□□□□□ -1.02
VMA21-203ENST00000477649 CETN1Q12798 172 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms