RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 GTF2IRD2Q86UP8 949 aa6.46□□□□□ -1.38
VPS45-207ENST00000477558 ZNF227Q86WZ6 799 aa6.46□□□□□ -1.38
VPS45-207ENST00000477558 TRIM59Q8IWR1 403 aa6.46□□□□□ -1.38
VPS45-207ENST00000477558 TMEM52Q8NDY8 209 aa6.46□□□□□ -1.38
VPS45-207ENST00000477558 PANK1Q8TE04 598 aa6.46□□□□□ -1.38
VPS45-207ENST00000477558 SSH3Q8TE77 659 aa6.46□□□□□ -1.38
VPS45-207ENST00000477558 MKL1Q969V6 931 aa6.46□□□□□ -1.38
VPS45-207ENST00000477558 G6PC3Q9BUM1 346 aa6.46□□□□□ -1.38
VPS45-207ENST00000477558 CDADC1Q9BWV3 514 aa6.46□□□□□ -1.38
VPS45-207ENST00000477558 ANKRD2Q9GZV1 360 aa6.46□□□□□ -1.38
VPS45-207ENST00000477558 ZSWIM4Q9H7M6 989 aa6.46□□□□□ -1.38
VPS45-207ENST00000477558 RC3H2Q9HBD1 1191 aaKnown RBP6.46□□□□□ -1.38
VPS45-207ENST00000477558 ZBTB40Q9NUA8 1239 aa6.46□□□□□ -1.38
VPS45-207ENST00000477558 ADGRE2Q9UHX3 823 aa6.46□□□□□ -1.38
VPS45-207ENST00000477558 TMEM59LQ9UK28 342 aa6.46□□□□□ -1.38
VPS45-207ENST00000477558 PNMA6EA0A0J9YXQ4 647 aa6.45□□□□□ -1.38
VPS45-207ENST00000477558 WTIPA6NIX2 430 aaPredicted RBP6.45□□□□□ -1.38
VPS45-207ENST00000477558 EYA2O00167 538 aa6.45□□□□□ -1.38
VPS45-207ENST00000477558 STXBP3O00186 592 aa6.45□□□□□ -1.38
VPS45-207ENST00000477558 PPIP5K2O43314 1243 aa6.45□□□□□ -1.38
VPS45-207ENST00000477558 UFL1O94874 794 aa6.45□□□□□ -1.38
VPS45-207ENST00000477558 GNAI2P04899 355 aa6.45□□□□□ -1.38
VPS45-207ENST00000477558 FGFR2P21802 821 aa6.45□□□□□ -1.38
VPS45-207ENST00000477558 KLRK1P26718 216 aa6.45□□□□□ -1.38
VPS45-207ENST00000477558 RRP1P56182 461 aaKnown RBP6.45□□□□□ -1.38
VPS45-207ENST00000477558 AMPD2Q01433 879 aa6.45□□□□□ -1.38
VPS45-207ENST00000477558 SF1Q15637 639 aaKnown RBP6.45□□□□□ -1.38
VPS45-207ENST00000477558 FTSJ3Q8IY81 847 aaKnown RBP6.45□□□□□ -1.38
VPS45-207ENST00000477558 GPC2Q8N158 579 aa6.45□□□□□ -1.38
VPS45-207ENST00000477558 ST13P5Q8NFI4 369 aaPredicted RBP6.45□□□□□ -1.38
VPS45-207ENST00000477558 BTN2A2Q8WVV5 523 aa6.45□□□□□ -1.38
VPS45-207ENST00000477558 DNAJC7Q99615 494 aa6.45□□□□□ -1.38
VPS45-207ENST00000477558 PUS3Q9BZE2 481 aaKnown RBP6.45□□□□□ -1.38
VPS45-207ENST00000477558 EPN3Q9H201 632 aa6.45□□□□□ -1.38
VPS45-207ENST00000477558 PIF1Q9H611 641 aa6.45□□□□□ -1.38
VPS45-207ENST00000477558 ZMYM5Q9UJ78 669 aa6.45□□□□□ -1.38
VPS45-207ENST00000477558 DDX19BQ9UMR2 479 aa6.45□□□□□ -1.38
VPS45-207ENST00000477558 ECM29Q5VYK3 1845 aa6.45□□□□□ -1.38
VPS45-207ENST00000477558 PCNTO95613 3336 aa6.45□□□□□ -1.38
VPS45-207ENST00000477558 ZNF804BA4D1E1 1349 aa6.45□□□□□ -1.38
VPS45-207ENST00000477558 MROH5Q6ZUA9 1318 aa6.45□□□□□ -1.38
VPS45-207ENST00000477558 AKAP11Q9UKA4 1901 aa6.45□□□□□ -1.38
VPS45-207ENST00000477558 COL1A1P02452 1464 aaPredicted RBP6.44□□□□□ -1.38
VPS45-207ENST00000477558 AURKAO14965 403 aa6.44□□□□□ -1.38
VPS45-207ENST00000477558 PLIN1O60240 522 aa6.44□□□□□ -1.38
VPS45-207ENST00000477558 CAPNS1P04632 268 aa6.44□□□□□ -1.38
VPS45-207ENST00000477558 CYP4F3Q08477 520 aa6.44□□□□□ -1.38
VPS45-207ENST00000477558 GRB10Q13322 594 aa6.44□□□□□ -1.38
VPS45-207ENST00000477558 UBE4AQ14139 1066 aa6.44□□□□□ -1.38
VPS45-207ENST00000477558 MTERF2Q49AM1 385 aa6.44□□□□□ -1.38
VPS45-207ENST00000477558 LRRC24Q50LG9 513 aa6.44□□□□□ -1.38
VPS45-207ENST00000477558 CEP85Q6P2H3 762 aa6.44□□□□□ -1.38
VPS45-207ENST00000477558 POMZP3Q6PJE2 187 aa6.44□□□□□ -1.38
VPS45-207ENST00000477558 LDHAL6AQ6ZMR3 332 aa6.44□□□□□ -1.38
VPS45-207ENST00000477558 CBLL1Q75N03 491 aa6.44□□□□□ -1.38
VPS45-207ENST00000477558 ITPRIPQ8IWB1 547 aa6.44□□□□□ -1.38
VPS45-207ENST00000477558 KLHDC4Q8TBB5 520 aa6.44□□□□□ -1.38
VPS45-207ENST00000477558 LINC01599Q8WXQ3 324 aa6.44□□□□□ -1.38
VPS45-207ENST00000477558 YTHDC1Q96MU7 727 aaKnown RBP6.44□□□□□ -1.38
VPS45-207ENST00000477558 GPR101Q96P66 508 aaPredicted RBP6.44□□□□□ -1.38
VPS45-207ENST00000477558 EYA3Q99504 573 aa6.44□□□□□ -1.38
VPS45-207ENST00000477558 MPHOSPH8Q99549 860 aa6.44□□□□□ -1.38
VPS45-207ENST00000477558 TMX4Q9H1E5 349 aaPredicted RBP6.44□□□□□ -1.38
VPS45-207ENST00000477558 GPRC5CQ9NQ84 441 aa6.44□□□□□ -1.38
VPS45-207ENST00000477558 CTNND2Q9UQB3 1225 aa6.44□□□□□ -1.38
VPS45-207ENST00000477558 NOP58Q9Y2X3 529 aaKnown RBP6.44□□□□□ -1.38
VPS45-207ENST00000477558 KDM2BQ8NHM5 1336 aa6.44□□□□□ -1.38
VPS45-207ENST00000477558 C2orf71A6NGG8 1288 aa6.43□□□□□ -1.38
VPS45-207ENST00000477558 SRGAP3O43295 1099 aa6.43□□□□□ -1.38
VPS45-207ENST00000477558 ECE2O60344 883 aa6.43□□□□□ -1.38
VPS45-207ENST00000477558 PDE8BO95263 885 aa6.43□□□□□ -1.38
VPS45-207ENST00000477558 IL1R1P14778 569 aa6.43□□□□□ -1.38
VPS45-207ENST00000477558 GDNFP39905 211 aa6.43□□□□□ -1.38
VPS45-207ENST00000477558 PPP2R2AP63151 447 aa6.43□□□□□ -1.38
VPS45-207ENST00000477558 CXCL9Q07325 125 aa6.43□□□□□ -1.38
VPS45-207ENST00000477558 FZD5Q13467 585 aa6.43□□□□□ -1.38
VPS45-207ENST00000477558 SIRT2Q8IXJ6 389 aa6.43□□□□□ -1.38
VPS45-207ENST00000477558 NIM1KQ8IY84 436 aa6.43□□□□□ -1.38
VPS45-207ENST00000477558 JDP2Q8WYK2 163 aa6.43□□□□□ -1.38
VPS45-207ENST00000477558 SP110Q9HB58 689 aa6.43□□□□□ -1.38
VPS45-207ENST00000477558 NMRK2Q9NPI5 230 aa6.43□□□□□ -1.38
VPS45-207ENST00000477558 ERVK13-1Q9NX77 482 aa6.43□□□□□ -1.38
VPS45-207ENST00000477558 SNAP23O00161 211 aa6.42□□□□□ -1.38
VPS45-207ENST00000477558 AGRPO00253 132 aa6.42□□□□□ -1.38
VPS45-207ENST00000477558 TAF5LO75529 589 aa6.42□□□□□ -1.38
VPS45-207ENST00000477558 DDNO94850 711 aaPredicted RBP6.42□□□□□ -1.38
VPS45-207ENST00000477558 VIL1P09327 827 aaKnown RBP6.42□□□□□ -1.38
VPS45-207ENST00000477558 TRHRP34981 398 aaPredicted RBP6.42□□□□□ -1.38
VPS45-207ENST00000477558 IL15P40933 162 aaPredicted RBP6.42□□□□□ -1.38
VPS45-207ENST00000477558 ATP8B2P98198 1209 aa6.42□□□□□ -1.38
VPS45-207ENST00000477558 SSRP1Q08945 709 aaKnown RBP6.42□□□□□ -1.38
VPS45-207ENST00000477558 SCRN1Q12765 414 aa6.42□□□□□ -1.38
VPS45-207ENST00000477558 CRACR2BQ8N4Y2 399 aaPredicted RBP6.42□□□□□ -1.38
VPS45-207ENST00000477558 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.42□□□□□ -1.38
VPS45-207ENST00000477558 MAP6Q96JE9 813 aa6.42□□□□□ -1.38
VPS45-207ENST00000477558 HHIPL1Q96JK4 782 aa6.42□□□□□ -1.38
VPS45-207ENST00000477558 SPATA9Q9BWV2 254 aa6.42□□□□□ -1.38
VPS45-207ENST00000477558 COA1Q9GZY4 146 aa6.42□□□□□ -1.38
VPS45-207ENST00000477558 NKX2-4Q9H2Z4 354 aa6.42□□□□□ -1.38
VPS45-207ENST00000477558 DBNDD1Q9H9R9 158 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms